Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E07
         (890 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81062-8|CAD59145.1|  808|Caenorhabditis elegans Hypothetical pr...    32   0.63 
AL033508-3|CAA22054.1|  315|Caenorhabditis elegans Hypothetical ...    32   0.63 
Z93378-4|CAE17803.1|  514|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z81062-7|CAB02942.1|  755|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z19158-3|CAA79572.2|  305|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF047659-5|AAC04429.1|  347|Caenorhabditis elegans Hypothetical ...    29   4.5  

>Z81062-8|CAD59145.1|  808|Caenorhabditis elegans Hypothetical
           protein F15A4.8b protein.
          Length = 808

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +1

Query: 538 PRCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 681
           P    TT   S + PP  ++T + +T+      V ST IAP+T  +TT
Sbjct: 423 PDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 470


>AL033508-3|CAA22054.1|  315|Caenorhabditis elegans Hypothetical
           protein Y106G6G.4 protein.
          Length = 315

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +1

Query: 565 TSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPSMYESXV 717
           TS   PP TNS+ S++     V+ ++S+ +  L  +  T TL+ S  +S V
Sbjct: 223 TSTDPPPTTNSSNSTVESVTSVIPINSSTVPVLNTTLQTSTLAESSSQSVV 273


>Z93378-4|CAE17803.1|  514|Caenorhabditis elegans Hypothetical
           protein F19H8.5 protein.
          Length = 514

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 637 VSSTVIAPLTPSNTTGTLSPSMY 705
           + S  IAPL PSN+ G LSPS++
Sbjct: 159 ILSPRIAPLMPSNSKGLLSPSIF 181


>Z81062-7|CAB02942.1|  755|Caenorhabditis elegans Hypothetical
           protein F15A4.8a protein.
          Length = 755

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +1

Query: 553 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 681
           TTE  S + PP  ++T + +T+      V ST IAP+T  +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433


>U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical
           protein T09D3.3 protein.
          Length = 592

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 550 KTTEFTSRSCP-PRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGT 687
           KTT FT+   P P T ST +S T  V   + S+T     TP   T T
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTST 480


>Z19158-3|CAA79572.2|  305|Caenorhabditis elegans Hypothetical
           protein T23G5.6 protein.
          Length = 305

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +3

Query: 507 KPARKSPGSLPPXLENNRVYFKIMSTEDKQYLKLDNTKGSSD 632
           KP +K P  +PP   N   +  I S E +  LK      SSD
Sbjct: 106 KPYQKDPEPMPPICTNGNGFLDINSQEHENNLKRGYESDSSD 147


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 5/110 (4%)
 Frame = +1

Query: 565  TSRSCPPRTNST*SSITRKVLVM-----TVSSTVIAPLTPSNTTGTLSPSMYESXVMFFV 729
            TS++  P T+S  S IT+            SST  +P +P  T  + SPS  +S  +   
Sbjct: 851  TSQNPNPSTSSGSSMITQSPYPSQSTSPVESSTTPSPGSPGTTLTSTSPSPSQSTTIGST 910

Query: 730  YNREYNSVMTLDEDMAANEDREALGPXGKXSGYPQXLHGTSSLLXVVVKG 879
                   + T  E+M +    +  G  G     P  +  ++S    V  G
Sbjct: 911  QGSTSPGISTTSEEMTSQGSTQTPGSTGSTVTQPSTVSDSTSSGSTVTVG 960


>AF047659-5|AAC04429.1|  347|Caenorhabditis elegans Hypothetical
           protein K07H8.8 protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/72 (27%), Positives = 32/72 (44%)
 Frame = +2

Query: 311 GTPWNFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAF 490
           G   +FA Q W  D K  +K+   IQ+    TE+   + N       + + ++N N++  
Sbjct: 239 GADTHFAPQTWYCDMKNNIKNSTVIQYSSTGTEKIKMIDNLLTVFKNRNVPEENLNEVRE 298

Query: 491 GDSKDKTSKKVS 526
             SK KT    S
Sbjct: 299 ELSKGKTQHSTS 310


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,933,299
Number of Sequences: 27780
Number of extensions: 357749
Number of successful extensions: 1094
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)