Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E07
         (890 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g29080.1 68416.m03641 hypothetical protein                          32   0.59 
At5g61820.1 68418.m07757 expressed protein MtN19, Medicago trunc...    29   4.1  
At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A...    29   5.5  
At3g16060.1 68416.m02030 kinesin motor family protein similar to...    29   5.5  
At1g64150.1 68414.m07267 expressed protein contains Pfam profile...    29   5.5  
At3g43330.1 68416.m04580 hypothetical protein putative proteins ...    28   7.2  
At3g17550.1 68416.m02241 NLI interacting factor (NIF) family pro...    28   9.6  

>At3g29080.1 68416.m03641 hypothetical protein
          Length = 445

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 249 EGKXGXGYQGSREASDRKRQEEHHGTSPTSYGQRMERK 362
           E + G GY    EA D +R+ +H  TS ++ G   ERK
Sbjct: 395 EAEEGSGYHQRWEALDSRRKHDHSRTSGSALGTGTERK 432


>At5g61820.1 68418.m07757 expressed protein MtN19, Medicago
           truncatula, EMBL:MTY15367
          Length = 475

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 663 DTFKHHWYLEPLHVRK 710
           +T+ HHW +EP +VRK
Sbjct: 87  ETYLHHWIVEPYYVRK 102


>At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A19)
           Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis
           thaliana]; similar to cytochrome P450LXXIA1, Persea
           americana, M32885
          Length = 490

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 448 GVMVPFVYELDSLLGEDHSKLDGEVRFDDFL 356
           G  +P +  +D + G+DH   + + RFD+FL
Sbjct: 221 GEYIPSLSWIDKIRGQDHKMEEVDKRFDEFL 251


>At3g16060.1 68416.m02030 kinesin motor family protein similar to
           kinesin heavy chain member 2 GB:NP_032468 from [Mus
           musculus]; contains Pfam profile PF00225: Kinesin motor
           domain
          Length = 684

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
 Frame = +1

Query: 553 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTP-SNTT---GTLSPSMYESXVM 720
           T ++ +R    R N+  S  +  +L +    T + P  P SN        +PS  +S   
Sbjct: 80  TPQYGARPTNQRKNNDESEFSPGLLDLHSFDTELLPEIPVSNQLDGPSLFNPSQGQSFDD 139

Query: 721 FFVYNREYNSVMTLDEDMAANEDR 792
           F  YN++ N    L E++AA ++R
Sbjct: 140 FEAYNKQPNRSRVLAENLAAEKER 163


>At1g64150.1 68414.m07267 expressed protein contains Pfam profile
           PF01169: Uncharacterized protein family UPF0016
          Length = 370

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 668 GVSGAITVDDTVITRTFRVIELQVLFVLGGHDLEVNSV 555
           G  G +T+   V+ RTF  ++  + F  GG DL ++ +
Sbjct: 197 GALGIMTIISVVLGRTFHYVDEVLPFRFGGTDLPIDDI 234


>At3g43330.1 68416.m04580 hypothetical protein putative proteins -
           Arabidopsis thaliana
          Length = 489

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 153 KCGVRSQRTHGEDEGKQXQAQLGAXXSFESRQQTRKS 43
           + G++  RT+G  +GK+ Q  +     F  R Q RK+
Sbjct: 321 RLGIKKARTNGHGDGKKEQKDVSMRQWFAYRLQERKA 357


>At3g17550.1 68416.m02241 NLI interacting factor (NIF) family
           protein contains Pfam profile PF03031: NLI interacting
           factor
          Length = 296

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 531 SLPPXLENNRVYF--KIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHH 680
           SL   ++  R+YF  ++++ ++  Y+K  +   + +  ++  D T+D + HH
Sbjct: 165 SLLKLIDPKRIYFGDRVITRDESPYVKTLDLVLAEERGVVIVDDTSDVWTHH 216


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,157,620
Number of Sequences: 28952
Number of extensions: 340799
Number of successful extensions: 953
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2090971320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)