Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_E05
(895 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 308 4e-84
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 308 4e-84
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 306 1e-83
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 306 1e-83
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 293 8e-80
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 293 8e-80
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 281 6e-76
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 144 5e-35
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 144 9e-35
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 143 1e-34
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 143 1e-34
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 141 7e-34
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 140 9e-34
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 139 2e-33
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 139 3e-33
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 133 1e-31
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 108 6e-24
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 107 7e-24
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 0.78
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 31 1.4
At5g12120.1 68418.m01423 ubiquitin-associated (UBA)/TS-N domain-... 29 5.5
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 308 bits (755), Expect = 4e-84
Identities = 138/173 (79%), Positives = 152/173 (87%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDG MP+DKT+GGG D+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARG YTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG KSKL F +YP
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173
Score = 92.7 bits (220), Expect = 3e-19
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P PQVST VVEPYNS+L+TH+ LEH+D + ++D AIYDICRR PT TNLNRL
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVS 232
Query: 847 QIVSSIXASL 876
Q++SS+ ASL
Sbjct: 233 QVISSLTASL 242
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 308 bits (755), Expect = 4e-84
Identities = 138/173 (79%), Positives = 152/173 (87%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDG MP+DKT+GGG D+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARG YTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG KSKL F +YP
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173
Score = 92.7 bits (220), Expect = 3e-19
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P PQVST VVEPYNS+L+TH+ LEH+D + ++D AIYDICRR PT TNLNRL
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVS 232
Query: 847 QIVSSIXASL 876
Q++SS+ ASL
Sbjct: 233 QVISSLTASL 242
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 306 bits (752), Expect = 1e-83
Identities = 138/173 (79%), Positives = 151/173 (87%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDG MP DKT+GGG D+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARG YTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG KSKL F +YP
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173
Score = 92.7 bits (220), Expect = 3e-19
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P PQVST VVEPYNS+L+TH+ LEH+D + ++D AIYDICRR PT TNLNRL
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVS 232
Query: 847 QIVSSIXASL 876
Q++SS+ ASL
Sbjct: 233 QVISSLTASL 242
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 306 bits (752), Expect = 1e-83
Identities = 138/173 (79%), Positives = 151/173 (87%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDG MP DKT+GGG D+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARG YTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG KSKL F +YP
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173
Score = 92.7 bits (220), Expect = 3e-19
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P PQVST VVEPYNS+L+TH+ LEH+D + ++D AIYDICRR PT TNLNRL
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVS 232
Query: 847 QIVSSIXASL 876
Q++SS+ ASL
Sbjct: 233 QVISSLTASL 242
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 293 bits (720), Expect = 8e-80
Identities = 132/173 (76%), Positives = 148/173 (85%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARG YT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYG KSKL F IYP
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYP 173
Score = 92.3 bits (219), Expect = 4e-19
Identities = 44/70 (62%), Positives = 52/70 (74%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P PQVST VVEPYNS+L+TH+ LEH+D A ++D AIYDICRR PT TNLNRL
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLIS 232
Query: 847 QIVSSIXASL 876
QI+SS+ SL
Sbjct: 233 QIISSLTTSL 242
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 293 bits (720), Expect = 8e-80
Identities = 132/173 (76%), Positives = 148/173 (85%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARG YT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYG KSKL F IYP
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYP 173
Score = 92.3 bits (219), Expect = 4e-19
Identities = 44/70 (62%), Positives = 52/70 (74%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P PQVST VVEPYNS+L+TH+ LEH+D A ++D AIYDICRR PT TNLNRL
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLIS 232
Query: 847 QIVSSIXASL 876
QI+SS+ SL
Sbjct: 233 QIISSLTTSL 242
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 281 bits (688), Expect = 6e-76
Identities = 124/173 (71%), Positives = 146/173 (84%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARG YT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
R+RKLAD CTGLQGFL+F+ LL+ERLSVD+G KSKL F IYP
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYP 173
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P PQVST VVEPYNS+L+TH+ LEH+D ++D AIYDICRR PT +NLNRL
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLIS 232
Query: 847 QIVSSIXASL 876
Q +SS+ SL
Sbjct: 233 QTISSLTTSL 242
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 144 bits (350), Expect = 5e-35
Identities = 67/173 (38%), Positives = 99/173 (57%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE + + GQ G QIG+ WE+ C EHGI P G + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQ--LERVNVYYNEASCGR 58
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+G YT G E++D VLD
Sbjct: 59 YVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
+RK A+ C LQGF + H LL+ ++ +Y + L F ++P
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 171
Score = 55.2 bits (127), Expect = 6e-08
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P P+VS VVEPYN+ L+ H +E++D ++D A+YDIC R P+ +LN L
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 230
Query: 847 QIVSSIXASL 876
+S + L
Sbjct: 231 ATMSGVTCCL 240
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 144 bits (348), Expect = 9e-35
Identities = 67/173 (38%), Positives = 98/173 (56%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE + V GQ G QIG+ WE+ C EHG+ P G D + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+G YT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
+RK A+ C LQGF + H LL+ ++ +Y + L F ++P
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 172
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P P+VS VVEPYN+ L+ H +E++D ++D A+YDIC R P+ +LN L
Sbjct: 172 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLIS 231
Query: 847 QIVSSIXASL 876
+S + SL
Sbjct: 232 ATMSGVTCSL 241
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 143 bits (347), Expect = 1e-34
Identities = 67/173 (38%), Positives = 97/173 (56%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE + + GQ G QIG WE+ C EHGI P G D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQ--LERINVYYNEASCGR 58
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+G YT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
+RK A+ C LQGF + H LL+ ++ +Y + L F ++P
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 171
Score = 55.2 bits (127), Expect = 6e-08
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P P+VS VVEPYN+ L+ H +E++D ++D A+YDIC R P+ +LN L
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 230
Query: 847 QIVSSIXASL 876
+S + L
Sbjct: 231 ATMSGVTCCL 240
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 143 bits (347), Expect = 1e-34
Identities = 67/173 (38%), Positives = 97/173 (56%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE + + GQ G QIG WE+ C EHGI P G D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQ--LERINVYYNEASCGR 58
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+G YT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
+RK A+ C LQGF + H LL+ ++ +Y + L F ++P
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 171
Score = 55.2 bits (127), Expect = 6e-08
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P P+VS VVEPYN+ L+ H +E++D ++D A+YDIC R P+ +LN L
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 230
Query: 847 QIVSSIXASL 876
+S + L
Sbjct: 231 ATMSGVTCCL 240
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 141 bits (341), Expect = 7e-34
Identities = 66/173 (38%), Positives = 98/173 (56%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE + + GQ G QIG+ WE+ C EHGI G D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+G YT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
+RK A+ C LQGF + H LL+ ++ +Y + L F ++P
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 172
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P P+VS VVEPYN+ L+ H +E++D ++D A+YDIC R P+ +LN L
Sbjct: 172 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLIS 231
Query: 847 QIVSSIXASL 876
+S + SL
Sbjct: 232 ATMSGVTCSL 241
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 140 bits (340), Expect = 9e-34
Identities = 66/173 (38%), Positives = 97/173 (56%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE + + GQ G QIG WE+ C EHGI G + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQ--LERVNVYYNEASCGR 58
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+G YT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
+RK A+ C LQGF + H LL+ ++ +Y + L F ++P
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 171
Score = 55.2 bits (127), Expect = 6e-08
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P P+VS VVEPYN+ L+ H +E++D ++D A+YDIC R P+ +LN L
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 230
Query: 847 QIVSSIXASL 876
+S + L
Sbjct: 231 ATMSGVTCCL 240
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 139 bits (337), Expect = 2e-33
Identities = 66/173 (38%), Positives = 98/173 (56%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE + + GQ G QIG+ WE+ LEHGI G D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQ--LERVNVYYNEASCGR 58
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+G YT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
+RK A+ C LQGF + H LL+ ++ +Y + + F ++P
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFP 171
Score = 55.2 bits (127), Expect = 6e-08
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P P+VS VVEPYN+ L+ H +E++D ++D A+YDIC R P+ +LN L
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLIS 230
Query: 847 QIVSSIXASL 876
+S + L
Sbjct: 231 ATMSGVTCCL 240
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 139 bits (336), Expect = 3e-33
Identities = 66/173 (38%), Positives = 97/173 (56%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE + + GQ G QIG WE+ C EHGI G D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQ--LERINVYFNEASGGK 58
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+G YT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
+RK A+ C LQGF + H LL+ ++ +Y + + F ++P
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFP 171
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P P+VS VVEPYN+ L+ H +E++D ++D A+YDIC R PT +LN L
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLIS 230
Query: 847 QIVSSIXASL 876
+S + L
Sbjct: 231 ATMSGVTCCL 240
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 133 bits (322), Expect = 1e-31
Identities = 64/173 (36%), Positives = 96/173 (55%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGK 329
MRE + + GQ G QIG WE+ C EHGI G D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQ--LERIDVYFNEASGGK 58
Query: 330 XVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGXYTIGKEIVDLVLD 509
VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+G YT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 510 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
+RK A+ LQGF + H LL+ ++ +Y + + F ++P
Sbjct: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFP 171
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +1
Query: 667 PXPQVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXG 846
P P+VS VVEPYN+ L+ H +E++D ++D A+YDIC R PT +LN L
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLIS 230
Query: 847 QIVSSIXASL 876
+S + L
Sbjct: 231 ATMSGVTCCL 240
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 108 bits (259), Expect = 6e-24
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Frame = +3
Query: 153 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGKX 332
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 333 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGXYTIGKEIVDLVL 506
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G Y GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIM 119
Query: 507 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
D I + AD L+GF++ H L+E L+ Y K + ++P
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
Score = 35.1 bits (77), Expect = 0.063
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 676 QVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXGQIV 855
+ S VV+PYNS+LT ++DC ++D A+ I PT N L ++
Sbjct: 177 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVM 236
Query: 856 SSIXASL 876
S+ +L
Sbjct: 237 SASTTTL 243
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 107 bits (258), Expect = 7e-24
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Frame = +3
Query: 153 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGXMPTDKTIGGGXDSFNTFFSETGAGKX 332
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 333 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGXYTIGKEIVDLVL 506
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G Y GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIM 119
Query: 507 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKLEFXIYP 668
D I + AD L+GF++ H L+E L+ Y K + ++P
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
Score = 35.5 bits (78), Expect = 0.048
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 676 QVSTXVVEPYNSILTTHTXLEHSDCAFMVDXXAIYDICRR*SXH*APTXTNLNRLXGQIV 855
+ S VV+PYNS+LT ++DC ++D A+ I PT N L ++
Sbjct: 177 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVM 236
Query: 856 SSIXASL 876
S+ +L
Sbjct: 237 SASTTTL 243
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 31.5 bits (68), Expect = 0.78
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -3
Query: 587 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNGVXTTGIVVGRIFLTSNKLFWMK 408
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDSSYGNE-----EIFEAFQSLLYVR 663
Query: 407 QLSVCASADLINNSR---FKIDEDSTGYXLASSGLAEESVERIXSTPD 273
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -3
Query: 356 IDEDSTGYXLASSGLAEESVERIXSTPDGLVCGHXAIRLDAVLQAVKLPAGITD---LDS 186
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 185 G-LANVYRDALTHF 147
G ANVYR LTHF
Sbjct: 808 GSAANVYRIVLTHF 821
>At5g12120.1 68418.m01423 ubiquitin-associated (UBA)/TS-N
domain-containing protein contains Pfam profile PF00627:
UBA/TS-N domain
Length = 619
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Frame = -3
Query: 482 SNGVXTTGIVVGRIFLTSNKLFWMKQLSVCASADLINNSRFK-IDE-DSTGYXLAS---- 321
S + + +VVG ++ LS S+ L NN RF+ IDE DSTG S
Sbjct: 26 SGSMGGSSVVVGGYNPLLGTFQTIESLSATGSSSLHNNGRFRHIDESDSTGADCDSVSNN 85
Query: 320 ---SGLAEESVERIXST 279
SG +E+ E++ ST
Sbjct: 86 GSWSGESEDHKEKVPST 102
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,816,934
Number of Sequences: 28952
Number of extensions: 336532
Number of successful extensions: 879
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2100696768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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