Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E04
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0259 - 1996427-1998772                                           31   1.2  
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649     29   3.7  
08_02_0272 + 15189617-15190276,15190361-15191107                       29   4.9  
04_03_0694 + 18781776-18781994,18782475-18782648,18782743-187830...    29   4.9  
03_01_0273 - 2107778-2108772,2108857-2109043,2109121-2110575,211...    29   4.9  
09_06_0010 - 20193577-20193921,20194014-20194160,20194239-201944...    29   6.5  
05_03_0469 + 14439472-14440905                                         29   6.5  
11_04_0358 + 16725417-16725422,16725789-16725858,16727825-167286...    28   8.6  
05_03_0618 - 16262826-16263097,16263111-16263183                       28   8.6  
03_02_0950 + 12661008-12662312,12662403-12662576                       28   8.6  
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924...    28   8.6  

>03_01_0259 - 1996427-1998772
          Length = 781

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 401 IFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSK 505
           I  ++ V++ N   HHALKLI + +  +I  GDSK
Sbjct: 732 ILVKKNVRICN-HCHHALKLISRYSGRRIVVGDSK 765


>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
          Length = 461

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 469 LVDQLEGVMVPFVYELDSLLGEDHSKLDG 383
           +V    GVM P + +L  LLGE+++KL G
Sbjct: 7   IVGATTGVMKPLLSKLTKLLGEEYAKLKG 35


>08_02_0272 + 15189617-15190276,15190361-15191107
          Length = 468

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -3

Query: 721 HDVAFVHGGLKVPVVFEGVSGAITVDDTVITRTFRVIELQVLFVLGGHDLEVNSVVF 551
           HD++F HG L++P         + VDDT   + F ++  + L   G +  EV + VF
Sbjct: 300 HDISFRHGALRIP--------RLAVDDTTEHKLFSLMAFEQLHGAGAN--EVTAYVF 346


>04_03_0694 +
           18781776-18781994,18782475-18782648,18782743-18783057,
           18783791-18785569,18786334-18786651,18787052-18787105
          Length = 952

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +2

Query: 188 QLYMSVVI---GEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDG 358
           +LY+ +++   G Y+ A+   S     + G  +KE  K L+E+    T++   +L T  G
Sbjct: 491 ELYLKILLEDLGRYDEALQYISSLEANQAGLTVKEYGKILVEHRPAETVEILLRLCTDGG 550

Query: 359 KEIVK 373
             + +
Sbjct: 551 DPMTR 555


>03_01_0273 -
           2107778-2108772,2108857-2109043,2109121-2110575,
           2110670-2111251
          Length = 1072

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
 Frame = -3

Query: 337 VGEVHGVPLAVFDQTLHGFLDNLSLLFLQIFRAFGDSG-----------LVFTNDDTHIQ 191
           V E  G+P+AV D  +    D +  +FL+        G           L   N D+ I 
Sbjct: 705 VDEFFGIPVAVRDDLVQDLADGMEAIFLEYISFLTSCGSKQSYLPSLPPLTRCNQDSKII 764

Query: 190 LLRQYVISSWCKCGVRSQRTHGEDEGK 110
            L +   +  C+  V S R HG  +G+
Sbjct: 765 RLWKKAATP-CRAPVSSPRAHGHHQGQ 790


>09_06_0010 -
           20193577-20193921,20194014-20194160,20194239-20194495,
           20194619-20194826
          Length = 318

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 20/66 (30%), Positives = 26/66 (39%)
 Frame = +3

Query: 501 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNT 680
           P     R+     P    TT+  +   PP T S  S      +  T SSTV   +  + T
Sbjct: 244 PPVSQRRQFQAPPPAAPTTTKTAAAPAPPPTASWESFDLLSSMPSTSSSTVTTTMAAATT 303

Query: 681 TGTLSP 698
           T T SP
Sbjct: 304 TTTTSP 309


>05_03_0469 + 14439472-14440905
          Length = 477

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +3

Query: 495 VTPKTKPARKSPGS--LPPCWKTTEFTSRSCPP 587
           +T  T+ AR  PG+  +PP W+    T+RS PP
Sbjct: 187 LTAVTEFARGVPGAPTVPPVWEREALTTRSWPP 219


>11_04_0358 +
           16725417-16725422,16725789-16725858,16727825-16728693,
           16729109-16729198,16730071-16730356,16730573-16730592
          Length = 446

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -3

Query: 646 DDTVITRTFRVIELQVLFVLGGHDLEVNSVVFQHGGKLPGDFLAGFVFG 500
           DDT       V+  ++  VLGG D+    V F  GG +    L GF+FG
Sbjct: 155 DDTTTEDDLMVVSAELEKVLGGVDVASARVSFAMGGGVDCP-LQGFLFG 202


>05_03_0618 - 16262826-16263097,16263111-16263183
          Length = 114

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 169 SSWCKCGVRSQRTHGEDEGKQSQSHLGAV 83
           S  C+CG+RS+R    +E +  +  LG V
Sbjct: 24  SGHCRCGLRSRRCTAREEFRSKEEMLGIV 52


>03_02_0950 + 12661008-12662312,12662403-12662576
          Length = 492

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 173 DVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEV 274
           +VL+ +      +GEY+ AIA CS+ L++ K  V
Sbjct: 411 EVLSSRASSYKEVGEYKKAIADCSKVLEKDKDNV 444


>01_05_0346 +
           21191542-21191783,21191988-21192072,21192159-21192422,
           21192518-21192820,21193695-21193799,21193916-21194020,
           21194613-21194712,21195614-21195933,21196183-21196359,
           21196432-21196560,21196592-21196636,21196851-21197078
          Length = 700

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 485 IAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMSTEDKQYLKLDNT 619
           I F D K+K  K    K    +EN+ + F +M+  D QYL  +NT
Sbjct: 354 ILFNDMKEKGVKSGK-KCVLSMENHGIGFLLMAYNDVQYLVPNNT 397


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,554,022
Number of Sequences: 37544
Number of extensions: 469895
Number of successful extensions: 1530
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)