Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_E04
(879 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 32 3.2
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 32 3.2
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 32 3.2
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 31 5.5
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 5.5
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 7.3
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 7.3
BX537728-1|CAD97821.1| 609|Homo sapiens hypothetical protein pr... 31 7.3
AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein. 31 7.3
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 492 SVTPKTKPARK---SPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAP 662
S TP T P K SP + P T+ + S PRT +T +T T +S P
Sbjct: 2887 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIP 2944
Query: 663 LTPSNTTGTLSPPCT 707
+ TTGTL T
Sbjct: 2945 SSTLGTTGTLPEQTT 2959
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 546 CWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 701
C T +S + P T T +T + T ++T + PS+T GT PP
Sbjct: 1618 CPSTPATSSTATPSSTPGTTWILTEQTTAATTTATTGSTAIPSSTPGTAPPP 1669
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 492 SVTPKTKPARK---SPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAP 662
S TP T P K SP + P T+ + S PRT +T +T T +S P
Sbjct: 101 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTTTATKSTATSVTPIP 158
Query: 663 LTPSNTTGTLSPPCT 707
+ TTGTL T
Sbjct: 159 SSTLGTTGTLPEQTT 173
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 492 SVTPKTKPARK---SPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAP 662
S TP T P K SP + P T+ + S PRT +T +T T +S P
Sbjct: 361 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIP 418
Query: 663 LTPSNTTGTLSPPCT 707
+ TTGTL T
Sbjct: 419 SSTLGTTGTLPEQTT 433
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 31.1 bits (67), Expect = 5.5
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 498 TPKTKPARK---SPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT 668
TP T P K SP + P T+ + S PRT +T +T T +S P +
Sbjct: 54 TPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIPSS 111
Query: 669 PSNTTGTLSPPCT 707
TTGTL T
Sbjct: 112 TLGTTGTLPEQTT 124
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 31.1 bits (67), Expect = 5.5
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +3
Query: 492 SVTPKTKPARKSPGSLPPCWKTTE-FTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT 668
+ TP T PA S +LPP + T+ + PP T +T S T + S+T + P T
Sbjct: 162 TTTPITPPA--STTTLPPTTTPSPPTTTTTTPPPT-TTPSPPTTTPITPPTSTTTLPPTT 218
Query: 669 ---PSNTTGTLSPPCT 707
P TT T PP T
Sbjct: 219 TPSPPPTTTTTPPPTT 234
Score = 30.3 bits (65), Expect = 9.6
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 492 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT- 668
+ TP SP + P TT T+ PP T +T S T + S+T + P T
Sbjct: 125 TTTPSPPTTTPSPPTTTPSPPTTTTTT---PPPT-TTPSPPTTTPITPPASTTTLPPTTT 180
Query: 669 --PSNTTGTLSPPCT 707
P TT T PP T
Sbjct: 181 PSPPTTTTTTPPPTT 195
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 30.7 bits (66), Expect = 7.3
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 498 TPKTKPARKSPGSLPPCWKTTE-FTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT-- 668
TP T PA S +LPP + T+ + PP T +T S T + S+T + P T
Sbjct: 881 TPITPPA--STTTLPPTTTPSPPTTTTTTPPPT-TTPSPPTTTPITPPTSTTTLPPTTTP 937
Query: 669 -PSNTTGTLSPPCT 707
P TT T PP T
Sbjct: 938 SPPPTTTTTPPPTT 951
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 30.7 bits (66), Expect = 7.3
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 498 TPKTKPARKSPGSLPPCWKTTE-FTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT-- 668
TP T PA S +LPP + T+ + PP T +T S T + S+T + P T
Sbjct: 1506 TPITPPA--STTTLPPTTTPSPPTTTTTTPPPT-TTPSPPTTTPITPPTSTTTLPPTTTP 1562
Query: 669 -PSNTTGTLSPPCT 707
P TT T PP T
Sbjct: 1563 SPPPTTTTTPPPTT 1576
>BX537728-1|CAD97821.1| 609|Homo sapiens hypothetical protein
protein.
Length = 609
Score = 30.7 bits (66), Expect = 7.3
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 250 SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 429
SE + G QGSR SD+ + L +P N Q + H V SD+ +DCQ
Sbjct: 45 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 101
Query: 430 KQKGPS-RPQVDRPTKPQQN 486
K G S +PQ + + +N
Sbjct: 102 KPSGASQQPQSNFEVQSSRN 121
>AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.
Length = 1685
Score = 30.7 bits (66), Expect = 7.3
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 250 SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 429
SE + G QGSR SD+ + L +P N Q + H V SD+ +DCQ
Sbjct: 1121 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 1177
Query: 430 KQKGPS-RPQVDRPTKPQQN 486
K G S +PQ + + +N
Sbjct: 1178 KPSGASQQPQSNFEVQSSRN 1197
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,758,731
Number of Sequences: 237096
Number of extensions: 2577239
Number of successful extensions: 7186
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7185
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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