Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_E04
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 36 0.029
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.27
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.62
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.1
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 31 1.1
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 29 3.3
U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucos... 29 3.3
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 29 3.3
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.3
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.3
Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 4.4
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.7
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 7.7
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 7.7
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 7.7
AY594354-1|AAT01444.1| 539|Caenorhabditis elegans cofactor-inde... 28 7.7
AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical ... 28 7.7
AF039713-12|AAO12419.1| 521|Caenorhabditis elegans Hypothetical... 28 7.7
AF039713-11|AAB96720.1| 539|Caenorhabditis elegans Hypothetical... 28 7.7
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 492 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTP 671
+VT T ++P TT S + PP ++T + +T+ V ST IAP+T
Sbjct: 407 NVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTM 466
Query: 672 SNTT 683
+TT
Sbjct: 467 PSTT 470
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 552 KTTEFTSRSCP-PRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPPCT 707
KTT FT+ P P T ST +S T V + S+T TP T T + P T
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEPTT 486
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 501 PKTKPARKSPGSLPPCWKTTE--FTSRSCPPRTNST*SSITRKVLVMTVSSTVIA 659
PKT+P P ++P CW+ F PPR N+T I K + V+A
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPLIEDKCYAKLGDTLVMA 472
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 191 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 304
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 282 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 103
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 102 S 100
S
Sbjct: 136 S 136
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 245 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 415
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 416 TVKLINKRDHHALKLI 463
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 282 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 103
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 102 S 100
S
Sbjct: 136 S 136
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 555 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 683
TTE S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433
>U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform c protein.
Length = 379
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 237 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 85
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 237 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 85
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 237 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 85
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 237 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 85
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical
protein T11G6.4 protein.
Length = 499
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 539 TPVL-ENNRVYFKIMSTEDKQYLKLDNTKGS-SDDRIIYGDSTADTFKHH 682
TPVL + R K+ + EDK L D+ S S+D ++ D T KHH
Sbjct: 444 TPVLIKEKRKRHKLKAREDKALLNSDSDSNSDSEDDLLLNDQTTRR-KHH 492
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 277 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 113
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 269 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 358
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +2
Query: 398 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 553
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 554 NNRVYFKIMSTEDK 595
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +2
Query: 398 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 553
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 554 NNRVYFKIMSTEDK 595
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 185 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 364
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 365 IV--KSYFPIQFRVI 403
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
>AY594354-1|AAT01444.1| 539|Caenorhabditis elegans
cofactor-independent phosphoglyceratemutase protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = -3
Query: 847 YHAKSXDNRXXSXVPQGFTVFVGGHXFIKCHNTVVLSVVDEEHDVAFVHGGLKVPVVFEG 668
Y+A DNR + + +GG VV VV + + LK P++ +G
Sbjct: 211 YYAMDRDNRW-ERINVAYEAMIGGVGETSDEAGVV-EVVRKRYAADETDEFLK-PIILQG 267
Query: 667 VSGAITVDDTVITRTFRVIELQVLFVLGGHD 575
G + DDT+I +R ++ + G D
Sbjct: 268 EKGRVQNDDTIIFFDYRADRMREISAAMGMD 298
>AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical
protein Y106G6G.4 protein.
Length = 315
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 567 TSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLS 695
TS PP TNS+ S++ V+ ++S+ + L + T TL+
Sbjct: 223 TSTDPPPTTNSSNSTVESVTSVIPINSSTVPVLNTTLQTSTLA 265
>AF039713-12|AAO12419.1| 521|Caenorhabditis elegans Hypothetical
protein F57B10.3b protein.
Length = 521
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = -3
Query: 847 YHAKSXDNRXXSXVPQGFTVFVGGHXFIKCHNTVVLSVVDEEHDVAFVHGGLKVPVVFEG 668
Y+A DNR + + +GG VV VV + + LK P++ +G
Sbjct: 193 YYAMDRDNRW-ERINVAYEAMIGGVGETSDEAGVV-EVVRKRYAADETDEFLK-PIILQG 249
Query: 667 VSGAITVDDTVITRTFRVIELQVLFVLGGHD 575
G + DDT+I +R ++ + G D
Sbjct: 250 EKGRVQNDDTIIFFDYRADRMREISAAMGMD 280
>AF039713-11|AAB96720.1| 539|Caenorhabditis elegans Hypothetical
protein F57B10.3a protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = -3
Query: 847 YHAKSXDNRXXSXVPQGFTVFVGGHXFIKCHNTVVLSVVDEEHDVAFVHGGLKVPVVFEG 668
Y+A DNR + + +GG VV VV + + LK P++ +G
Sbjct: 211 YYAMDRDNRW-ERINVAYEAMIGGVGETSDEAGVV-EVVRKRYAADETDEFLK-PIILQG 267
Query: 667 VSGAITVDDTVITRTFRVIELQVLFVLGGHD 575
G + DDT+I +R ++ + G D
Sbjct: 268 EKGRVQNDDTIIFFDYRADRMREISAAMGMD 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,989,484
Number of Sequences: 27780
Number of extensions: 399590
Number of successful extensions: 1649
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -