Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E03
         (903 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   109   9e-26
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   7.3  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  109 bits (263), Expect = 9e-26
 Identities = 55/109 (50%), Positives = 61/109 (55%)
 Frame = +3

Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
           R K   VMR+LLRVR WQYRQ+ R HRAPRP RP + R LGY+AK               
Sbjct: 12  RKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGFSIFRIRVRCGGR 71

Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
                   TYGKPKSHGVNQLKP R LQS+AEE            +SYW
Sbjct: 72  KRPVHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYW 120



 Score = 30.7 bits (66), Expect = 0.063
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 506 ILVDPSHKAIRRDPXIXW 559
           I+VDP + AIRRDP + W
Sbjct: 133 IMVDPPNNAIRRDPNVNW 150


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = -1

Query: 471  NPSKSSTHGDHRNDGQHAPQQWIEGCAWASTG 376
            N S SST   H N   H+        +WA  G
Sbjct: 1087 NGSCSSTSSSHSNHSSHSSSSSNSAGSWAGMG 1118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,627
Number of Sequences: 2352
Number of extensions: 10267
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)