BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_E03
(903 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10 pro... 116 2e-25
BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15 p... 116 2e-25
BC081565-1|AAH81565.1| 145|Homo sapiens RPL15 protein protein. 116 2e-25
BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15 p... 116 2e-25
BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15 p... 116 2e-25
BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15 p... 116 2e-25
BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA 2... 116 2e-25
BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15 p... 116 2e-25
AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15 p... 116 2e-25
AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15 p... 116 2e-25
AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens ... 116 2e-25
AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15 p... 116 2e-25
AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L... 115 2e-25
AB007173-1|BAA25833.1| 42|Homo sapiens ribosomal protein L15 p... 78 5e-14
>L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10
protein.
Length = 205
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 133 ILIDPFHKAIRRNPDTQW 150
>BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 133 ILIDPFHKAIRRNPDTQW 150
>BC081565-1|AAH81565.1| 145|Homo sapiens RPL15 protein protein.
Length = 145
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
>BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 133 ILIDPFHKAIRRNPDTQW 150
>BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 133 ILIDPFHKAIRRNPDTQW 150
>BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 133 ILIDPFHKAIRRNPDTQW 150
>BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA
2510008H07 gene protein.
Length = 219
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 27 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 86
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 87 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 135
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 148 ILIDPFHKAIRRNPDTQW 165
>BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 133 ILIDPFHKAIRRNPDTQW 150
>AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 133 ILIDPFHKAIRRNPDTQW 150
>AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15
pseudogene 3 protein.
Length = 204
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERVGRHCGALRVLNSYW 120
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 133 ILIDPFHKAIRRNPDTQW 150
>AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens
clone TCBAP0781 mRNA sequence. ).
Length = 204
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 133 ILIDPFHKAIRRNPDTQW 150
>AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 116 bits (278), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 133 ILIDPFHKAIRRNPDTQW 150
>AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L15
protein.
Length = 204
Score = 115 bits (277), Expect = 2e-25
Identities = 59/109 (54%), Positives = 64/109 (58%)
Frame = +3
Query: 141 RXKLXAVMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQXXXXXXXXXXXXXX 320
R K VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 12 RKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGR 71
Query: 321 XXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 467
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 72 KRPVPKGATYGKPVHHGVNQLKFARSLQSLAEERAGRHCGALRVLNSYW 120
Score = 31.9 bits (69), Expect = 3.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 506 ILVDPSHKAIRRDPXIXW 559
IL+DP HKAIRR+P W
Sbjct: 133 ILIDPFHKAIRRNPDTQW 150
>AB007173-1|BAA25833.1| 42|Homo sapiens ribosomal protein L15
protein.
Length = 42
Score = 77.8 bits (183), Expect = 5e-14
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = +3
Query: 159 VMRFLLRVRVWQYRQLXRMHRAPRPTRPDKARXLGYRAKQ 278
VMRFLLRVR WQYRQL +HRAPRPTRPDKAR LGY+AKQ
Sbjct: 3 VMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQ 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,033,857
Number of Sequences: 237096
Number of extensions: 1659245
Number of successful extensions: 8190
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8169
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -