Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E02
         (904 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.81 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    25   1.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   1.1  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    25   1.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    25   1.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   5.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   7.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   10.0 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   10.0 

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +2

Query: 284  TPNWSXSGARRT*CRRSNATRYTTWPSC--WNT*TATPPSSPALEPD 418
            +P W+ +  RRT   R   T  TT P+   W T   T P    + P+
Sbjct: 1049 SPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPE 1095


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 507 RHYSGTLVNSTVADTKVYYTLAVH 436
           R+ +G   N T AD+ V YTL  H
Sbjct: 52  RYTAGLAANVTPADSMVNYTLGQH 75


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 507 RHYSGTLVNSTVADTKVYYTLAVH 436
           R+ +G   N T AD+ V YTL  H
Sbjct: 111 RYTAGLAANVTPADSMVNYTLGQH 134


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 507 RHYSGTLVNSTVADTKVYYTLAVH 436
           R+ +G   N T AD+ V YTL  H
Sbjct: 52  RYTAGLAANVTPADSMVNYTLGQH 75


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 507 RHYSGTLVNSTVADTKVYYTLAVH 436
           R+ +G   N T AD+ V YTL  H
Sbjct: 111 RYTAGLAANVTPADSMVNYTLGQH 134


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 13/53 (24%), Positives = 21/53 (39%)
 Frame = -1

Query: 730 PRPTTXSP*XVFNVSRMXVIKXDXPVRFFATTLLPFRVSLPSAGSFRATQSWS 572
           P+PT   P   FN+ R+     +    FF   L  +   +P     ++  S S
Sbjct: 237 PKPTPLVPQQGFNMERLLAPSTEVSAPFFRQPLDLYNFRVPQHQVLQSPSSTS 289


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 350  YILSRLTCGTKY 315
            Y L +L CGT+Y
Sbjct: 1452 YTLEKLLCGTRY 1463


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 217 SVADSPXLTEPPYYLKSPGLTGDAKLVEXGGPPYLVPQVKRDKI 348
           SVA        PY L+SP    +A  V+   PP+   Q  R+ +
Sbjct: 707 SVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNPV 750


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 217 SVADSPXLTEPPYYLKSPGLTGDAKLVEXGGPPYLVPQVKRDKI 348
           SVA        PY L+SP    +A  V+   PP+   Q  R+ +
Sbjct: 599 SVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNPV 642


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,006
Number of Sequences: 336
Number of extensions: 3552
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)