Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E02
         (904 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   3.1  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   5.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   7.3  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.6  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   9.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +1

Query: 472 NGTVDQGTRIVSVHPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKV 630
           N ++  G R  + H   A  G SG     + N+   T +  N LLT G PG V
Sbjct: 432 NASMSSGKRSTATHQ--AEYGGSGGASSSINNNNNVT-IPNNNLLTGGGPGTV 481


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 521 PTGCTDTILV-PWSTVPLRTLRFTIPSQ 441
           PT   D +++  W+ +PLRTL   + SQ
Sbjct: 325 PTSDIDLVVIGQWTMLPLRTLEMELISQ 352


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 440 FTPRYGHGPAPAPARKAGSRFKCSSSLARS 351
           F P +G GP   P R+   R    SS + S
Sbjct: 24  FLPHFGQGPRGQPQRQQVQRSDSDSSSSES 53


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 486 PRYQNSVGAPSRSAQGQQRLPPATAAQRRDQ 578
           PR Q       +  QG++ +PP    QR+ Q
Sbjct: 279 PRQQQQQQQQQQQQQGERYVPPQLRQQRQQQ 309


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 335 NATRYTTWPSCWN 373
           N T Y +WPS W+
Sbjct: 195 NRTLYMSWPSSWS 207


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 326 RRSNATRYTTWPSCWNT*TATPPSSPALEPDRGR 427
           RRS +TR T+WP       + P S P   P R R
Sbjct: 278 RRSRSTRPTSWP------RSRPTSKPKRLPRRRR 305


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,901
Number of Sequences: 2352
Number of extensions: 15403
Number of successful extensions: 52
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)