BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_E02
(904 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058311-1|AAL13540.1| 322|Drosophila melanogaster GH07301p pro... 124 1e-28
AE014296-185|AAF47447.1| 322|Drosophila melanogaster CG9119-PA ... 124 1e-28
AY084189-1|AAL89927.1| 322|Drosophila melanogaster RE72485p pro... 121 2e-27
AE014296-184|AAN11463.1| 361|Drosophila melanogaster CG32335-PA... 121 2e-27
AY058386-1|AAL13615.1| 453|Drosophila melanogaster GH14865p pro... 29 6.6
AE014134-913|AAF52244.1| 453|Drosophila melanogaster CG14021-PB... 29 6.6
AE014134-912|AAF52245.1| 453|Drosophila melanogaster CG14021-PA... 29 6.6
>AY058311-1|AAL13540.1| 322|Drosophila melanogaster GH07301p
protein.
Length = 322
Score = 124 bits (300), Expect = 1e-28
Identities = 70/179 (39%), Positives = 100/179 (55%), Gaps = 2/179 (1%)
Frame = +1
Query: 106 ASXQVTIKXXALYXPPLDAVACVLSNGLTTNFKFVEVSVADSPXLTEPPYYLKSPGLTGD 285
++ Q+ + LY PPL + V+ L NF V VSV P L + L GL G
Sbjct: 7 STEQLLFEEKPLYVPPLSELQNVIQGALAANFANVNVSVGPCPDLKAKQFGLVESGLGGK 66
Query: 286 AKLVEXGGPPYLVPQVKRDKIYDLAKLLEHL-NRDPAFLAGAGAGPWPYLGVNCEGIVNL 462
L+E GGPP+L+P V+RDK+Y++A++ + F GAGAGPWP G NCEGI NL
Sbjct: 67 PTLLEAGGPPFLLPLVQRDKLYNIAEITRKIQGPGTVFAVGAGAGPWPIRGSNCEGIFNL 126
Query: 463 SV-RNGTVDQGTRIVSVHPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIK 636
SV + G+ +V G + + +++P+ E R ALL N L++GKPG+V+K
Sbjct: 127 SVNEKDELTNGSYTATVR--GEQEEC---VLEKIPHTEPRCALLLNLFLSQGKPGQVLK 180
Score = 44.4 bits (100), Expect(2) = 5e-05
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 633 KVVAKNRTGXSXFITXIRETLKTXYGDXVVGLGXAFVL 746
K+ AK RTG FI IR+ L+ YGD VVGLG F++
Sbjct: 180 KITAKQRTGEQNFIECIRKGLENHYGDKVVGLGGIFLI 217
Score = 21.4 bits (43), Expect(2) = 5e-05
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 744 LHXFELDAPXXVVGTLVTXXSD 809
L +E+ A VGTLVT D
Sbjct: 245 LKFYEMPAQLNAVGTLVTKEHD 266
>AE014296-185|AAF47447.1| 322|Drosophila melanogaster CG9119-PA
protein.
Length = 322
Score = 124 bits (300), Expect = 1e-28
Identities = 70/179 (39%), Positives = 100/179 (55%), Gaps = 2/179 (1%)
Frame = +1
Query: 106 ASXQVTIKXXALYXPPLDAVACVLSNGLTTNFKFVEVSVADSPXLTEPPYYLKSPGLTGD 285
++ Q+ + LY PPL + V+ L NF V VSV P L + L GL G
Sbjct: 7 STEQLLFEEKPLYVPPLSELQNVIQGALAANFANVNVSVGPCPDLKAKQFGLVESGLGGK 66
Query: 286 AKLVEXGGPPYLVPQVKRDKIYDLAKLLEHL-NRDPAFLAGAGAGPWPYLGVNCEGIVNL 462
L+E GGPP+L+P V+RDK+Y++A++ + F GAGAGPWP G NCEGI NL
Sbjct: 67 PTLLEAGGPPFLLPLVQRDKLYNIAEITRKIQGPGTVFAVGAGAGPWPIRGSNCEGIFNL 126
Query: 463 SV-RNGTVDQGTRIVSVHPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIK 636
SV + G+ +V G + + +++P+ E R ALL N L++GKPG+V+K
Sbjct: 127 SVNEKDELTNGSYTATVR--GEQEEC---VLEKIPHTEPRCALLLNLFLSQGKPGQVLK 180
Score = 44.4 bits (100), Expect(2) = 5e-05
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 633 KVVAKNRTGXSXFITXIRETLKTXYGDXVVGLGXAFVL 746
K+ AK RTG FI IR+ L+ YGD VVGLG F++
Sbjct: 180 KITAKQRTGEQNFIECIRKGLENHYGDKVVGLGGIFLI 217
Score = 21.4 bits (43), Expect(2) = 5e-05
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 744 LHXFELDAPXXVVGTLVTXXSD 809
L +E+ A VGTLVT D
Sbjct: 245 LKFYEMPAQLNAVGTLVTKEHD 266
>AY084189-1|AAL89927.1| 322|Drosophila melanogaster RE72485p
protein.
Length = 322
Score = 121 bits (291), Expect = 2e-27
Identities = 69/180 (38%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Frame = +1
Query: 115 QVTIKXXALYXPPLDAVACVLSNGLTTNFKFVEVSVADSPXLTEPPYYLKSPGLTGDAKL 294
Q+ + L+ PPL + V+ L NF+ V+VSV P L + + L GL G A L
Sbjct: 10 QLLFEERPLHVPPLSELKRVIQGALDENFRTVDVSVEACPDLRDSQFGLVERGLGGKATL 69
Query: 295 VEXGGPPYLVPQVKRDKIYDLAKLLEHL-NRDPAFLAGAGAGPWPYLGVNCEGIVNLSV- 468
+E GGPPYL P V+RDK+Y+L ++ F G GAGPWP NCEGI N S+
Sbjct: 70 LEAGGPPYLRPLVQRDKLYNLKEITRRTQGAGKIFAVGPGAGPWPIRHSNCEGIFNFSLN 129
Query: 469 RNGTVDQGTRIVSVHPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIKWSRR 648
+ QG+ +V GA + + +++P E+R AL+ N L+EGKPG+V++ S +
Sbjct: 130 EEDELTQGSYTATVR--GA---NEDCVLERIPETESRAALILNLFLSEGKPGQVLRISAK 184
Score = 42.3 bits (95), Expect = 9e-04
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 633 KVVAKNRTGXSXFITXIRETLKTXYGDXVVGLGXAFVL 746
++ AK RTG F+ IR+ L+ YGD VVGLG FV+
Sbjct: 180 RISAKQRTGGENFVECIRKGLERHYGDQVVGLGGMFVV 217
>AE014296-184|AAN11463.1| 361|Drosophila melanogaster CG32335-PA
protein.
Length = 361
Score = 121 bits (291), Expect = 2e-27
Identities = 69/180 (38%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Frame = +1
Query: 115 QVTIKXXALYXPPLDAVACVLSNGLTTNFKFVEVSVADSPXLTEPPYYLKSPGLTGDAKL 294
Q+ + L+ PPL + V+ L NF+ V+VSV P L + + L GL G A L
Sbjct: 49 QLLFEERPLHVPPLSELKRVIQGALDENFRTVDVSVEACPDLRDSQFGLVERGLGGKATL 108
Query: 295 VEXGGPPYLVPQVKRDKIYDLAKLLEHL-NRDPAFLAGAGAGPWPYLGVNCEGIVNLSV- 468
+E GGPPYL P V+RDK+Y+L ++ F G GAGPWP NCEGI N S+
Sbjct: 109 LEAGGPPYLRPLVQRDKLYNLKEITRRTQGAGKIFAVGPGAGPWPIRHSNCEGIFNFSLN 168
Query: 469 RNGTVDQGTRIVSVHPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIKWSRR 648
+ QG+ +V GA + + +++P E+R AL+ N L+EGKPG+V++ S +
Sbjct: 169 EEDELTQGSYTATVR--GA---NEDCVLERIPETESRAALILNLFLSEGKPGQVLRISAK 223
Score = 42.3 bits (95), Expect = 9e-04
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 633 KVVAKNRTGXSXFITXIRETLKTXYGDXVVGLGXAFVL 746
++ AK RTG F+ IR+ L+ YGD VVGLG FV+
Sbjct: 219 RISAKQRTGGENFVECIRKGLERHYGDQVVGLGGMFVV 256
>AY058386-1|AAL13615.1| 453|Drosophila melanogaster GH14865p
protein.
Length = 453
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 80 THVXACRXSLPLKSQSRXXHSXLLRWTQXLVXCRMV*QRTSSLWKCQWPIV 232
TH AC L ++ R H LL ++ C +V + W+ W ++
Sbjct: 51 THSPACEKRLEAETPRRDLHELLLELLDMMMSCLVVAPCVIAYWRGTWELM 101
>AE014134-913|AAF52244.1| 453|Drosophila melanogaster CG14021-PB,
isoform B protein.
Length = 453
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 80 THVXACRXSLPLKSQSRXXHSXLLRWTQXLVXCRMV*QRTSSLWKCQWPIV 232
TH AC L ++ R H LL ++ C +V + W+ W ++
Sbjct: 51 THSPACEKRLEAETPRRDLHELLLELLDMMMSCLVVAPCVIAYWRGTWELM 101
>AE014134-912|AAF52245.1| 453|Drosophila melanogaster CG14021-PA,
isoform A protein.
Length = 453
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 80 THVXACRXSLPLKSQSRXXHSXLLRWTQXLVXCRMV*QRTSSLWKCQWPIV 232
TH AC L ++ R H LL ++ C +V + W+ W ++
Sbjct: 51 THSPACEKRLEAETPRRDLHELLLELLDMMMSCLVVAPCVIAYWRGTWELM 101
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,568,281
Number of Sequences: 53049
Number of extensions: 720966
Number of successful extensions: 1960
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1952
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -