Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_E02
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53149-6|AAZ82856.1| 284|Caenorhabditis elegans Hypothetical pr... 92 6e-19
Z73103-2|CAA97425.2| 400|Caenorhabditis elegans Hypothetical pr... 33 0.28
U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin prote... 30 2.6
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 30 2.6
U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin prote... 30 2.6
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 30 2.6
AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin pro... 30 2.6
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 30 2.6
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 30 2.6
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 28 7.9
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 28 7.9
>U53149-6|AAZ82856.1| 284|Caenorhabditis elegans Hypothetical
protein C24B5.4 protein.
Length = 284
Score = 91.9 bits (218), Expect = 6e-19
Identities = 50/162 (30%), Positives = 85/162 (52%)
Frame = +1
Query: 172 VLSNGLTTNFKFVEVSVADSPXLTEPPYYLKSPGLTGDAKLVEXGGPPYLVPQVKRDKIY 351
V L +NF+ VEV++ D P L++PP+ KS G + ++ E GGP L P D +
Sbjct: 1 VFQTSLLSNFENVEVNIVDCPDLSKPPFNQKSSGFGHNLRIAEVGGPGNLYPGFHIDHQF 60
Query: 352 DLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCEGIVNLSVRNGTVDQGTRIVSVHPVGAPK 531
D+ K+ + A + G GAGPWP +G NCE + +++++ G V GTRI ++
Sbjct: 61 DIPKIGKVCEHPEAAVFGPGAGPWPIVGQNCEMVADVNLKTGEV--GTRIAEIN----SN 114
Query: 532 GSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIKWSRRTAR 657
Y+Q+ + DE + +L+ N L++ + + + R
Sbjct: 115 SDKRYVQRII--DEPKFSLMANLALSDADKSSTVVHFKASVR 154
>Z73103-2|CAA97425.2| 400|Caenorhabditis elegans Hypothetical
protein C08F8.3 protein.
Length = 400
Score = 33.1 bits (72), Expect = 0.28
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 502 VSVHPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKV--IKWSRRTARASPXLS 675
VS PV AP S QQQ P +TA +GN+L + G + + S T R SP L
Sbjct: 308 VSKAPVVAPS-SQLQQQQQQPCSSNQTARIGNFLERDQVRGNLLGVPLSSSTPRGSPELL 366
Query: 676 RXSE 687
R E
Sbjct: 367 RRRE 370
>U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin protein
1, isoform a protein.
Length = 953
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = -1
Query: 628 PFRVSLPSAGSFRATQSWSRRWAAVAGGSRCCPWALLLGAPTLFWYLGQQYRCGH*GLLY 449
P +++PS S + T + +WA+ G P + G PT G + GH G+ +
Sbjct: 213 PQPMTMPSTSSCQMT---TPKWASP--GVCNSPGLQMNGGPTSPLPNGTRRNTGHGGIEF 267
Query: 448 PRSSRPGTATV 416
P SSRP +V
Sbjct: 268 PSSSRPSICSV 278
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = -1
Query: 628 PFRVSLPSAGSFRATQSWSRRWAAVAGGSRCCPWALLLGAPTLFWYLGQQYRCGH*GLLY 449
P +++PS S + T + +WA+ G P + G PT G + GH G+ +
Sbjct: 288 PQPMTMPSTSSCQMT---TPKWASP--GVCNSPGLQMNGGPTSPLPNGTRRNTGHGGIEF 342
Query: 448 PRSSRPGTATV 416
P SSRP +V
Sbjct: 343 PSSSRPSICSV 353
>U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin protein
1, isoform c protein.
Length = 962
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = -1
Query: 628 PFRVSLPSAGSFRATQSWSRRWAAVAGGSRCCPWALLLGAPTLFWYLGQQYRCGH*GLLY 449
P +++PS S + T + +WA+ G P + G PT G + GH G+ +
Sbjct: 222 PQPMTMPSTSSCQMT---TPKWASP--GVCNSPGLQMNGGPTSPLPNGTRRNTGHGGIEF 276
Query: 448 PRSSRPGTATV 416
P SSRP +V
Sbjct: 277 PSSSRPSICSV 287
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
1, isoform d protein.
Length = 1106
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = -1
Query: 628 PFRVSLPSAGSFRATQSWSRRWAAVAGGSRCCPWALLLGAPTLFWYLGQQYRCGH*GLLY 449
P +++PS S + T + +WA+ G P + G PT G + GH G+ +
Sbjct: 366 PQPMTMPSTSSCQMT---TPKWASP--GVCNSPGLQMNGGPTSPLPNGTRRNTGHGGIEF 420
Query: 448 PRSSRPGTATV 416
P SSRP +V
Sbjct: 421 PSSSRPSICSV 431
>AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin
protein.
Length = 953
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = -1
Query: 628 PFRVSLPSAGSFRATQSWSRRWAAVAGGSRCCPWALLLGAPTLFWYLGQQYRCGH*GLLY 449
P +++PS S + T + +WA+ G P + G PT G + GH G+ +
Sbjct: 213 PQPMTMPSTSSCQMT---TPKWASP--GVCNSPGLQMNGGPTSPLPNGTRRNTGHGGIEF 267
Query: 448 PRSSRPGTATV 416
P SSRP +V
Sbjct: 268 PSSSRPSICSV 278
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 702 ESSMSLGXT**XWTXPCGSSRPLYYLSGFPFRQQVVSEQRSPGLVVGQLLLEV 544
+S+ + G T W CGSS + + FPF + + E + G QL L+V
Sbjct: 261 KSTNNEGSTCLHWAARCGSSECVSTILNFPFPSEFIIEIDTVGAPAYQLALDV 313
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 702 ESSMSLGXT**XWTXPCGSSRPLYYLSGFPFRQQVVSEQRSPGLVVGQLLLEV 544
+S+ + G T W CGSS + + FPF + + E + G QL L+V
Sbjct: 259 KSTNNEGSTCLHWAARCGSSECVSTILNFPFPSEFIIEIDTVGAPAYQLALDV 311
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 265 SPGLTGDAKLVEXGGPPYLVPQVKRDKIYDLAKLLEHLNRDP 390
SP L++ P P KRD ++ L K L+ L+R P
Sbjct: 4280 SPRRYASQTLLDGSRPGPSTPHAKRDALHTLTKELDSLSRSP 4321
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 265 SPGLTGDAKLVEXGGPPYLVPQVKRDKIYDLAKLLEHLNRDP 390
SP L++ P P KRD ++ L K L+ L+R P
Sbjct: 4280 SPRRYASQTLLDGSRPGPSTPHAKRDALHTLTKELDSLSRSP 4321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,662,663
Number of Sequences: 27780
Number of extensions: 340805
Number of successful extensions: 874
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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