Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E02
         (904 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    26   0.41 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.94 
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.8  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 26.2 bits (55), Expect = 0.41
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +1

Query: 430 LGVNCEGIVNLSVRNGTVDQGTRIVSVHPVGAPKGSSGYLQQQLPNDETRTALL--GNYL 603
           LG+ C+GI +++VR  +  +     S++ +   K    YL     +DE R A +  G Y 
Sbjct: 11  LGIACQGITSVTVRENSPRKLAN--SMNVIHEWK----YLDYDFGSDERRQAAMQSGEYD 64

Query: 604 LTEGKPGKVIKWSRRT 651
            T+  P  V +W   T
Sbjct: 65  HTKNYPFDVDQWRGMT 80


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 427 YLGVNCEGIVNLSVRNGT 480
           YLG+ C+G+ ++  RN T
Sbjct: 9   YLGITCQGVTDIHSRNLT 26


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 520 LLGAPTLFWYLGQQ 479
           L+  PT+FW+L +Q
Sbjct: 328 LITLPTIFWFLTRQ 341


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 326  GTKYGGPPXSTSLASPVNPGDLR 258
            GT+   P  +TSLA P N G  R
Sbjct: 1058 GTRPMIPDDNTSLALPKNEGPFR 1080


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,208
Number of Sequences: 438
Number of extensions: 4330
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)