Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D24
(910 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 1.3
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 31 1.3
SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22) 30 2.2
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06) 29 3.9
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9) 29 6.9
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024) 29 6.9
SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7) 28 9.1
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3) 28 9.1
SB_10552| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 141 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLV 308
T+ AT + T T++I TTT+ T T ++TT+ T T +T+++ +++
Sbjct: 12 TIITNATTTIITLSTTIITT-TTTITTTTTTITTTITPTITTTTTIITTTITTTII 66
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 171 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 290
T A + + PKTTT +ET TTV + T P + TS+
Sbjct: 229 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 267
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 138 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV 266
P L+ T+ T A S + P+TT ET TTV TV
Sbjct: 326 PALETTSAPESTAATESTVAPETTVSQETTVAPETTVPTETTV 368
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 171 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 290
T A + + PKTTT +ET TTV + T P + TS+
Sbjct: 2291 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 2329
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 171 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 290
T A + + PKTTT +ET TTV + T P + TS+
Sbjct: 776 TDAPATTLAPKTTTALETTVAAKTTV-VPETTPALETTSA 814
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 138 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV 266
P L+ T+ T A S + P+TT ET TTV TV
Sbjct: 2022 PALETTSAPESTAATESTVAPETTVSQETTVAPETTVPTETTV 2064
>SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)
Length = 266
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/53 (28%), Positives = 33/53 (62%)
Frame = +3
Query: 159 TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAV 317
TN++TT+ T++I T T+ T T ++ T+ IT T+ +T ++ +++ + +
Sbjct: 168 TNIITTSNTNIITTTTITITITIT-ITITITITITI-TITITITITITITITI 218
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 153 TATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTVPKADLTSSLPLSLVLAVGSKE 329
T +L TTA + P+TTT + T +TT + T P+A T+SL + LA + E
Sbjct: 566 TTASLATTAPEATTAPETTTALLVTTAPETTTASLVTTAPEA-TTASLATTASLATTAPE 624
Score = 29.1 bits (62), Expect = 5.2
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 141 TLKETAT-NLLTTARTSLILPKTTTL-METATNLSTTVHITWTVPKADLTSSLPLSLVLA 314
T ET T +L TTA + P+TTT + T +TT + T P+A T+SL + A
Sbjct: 519 TAPETTTASLATTAPETTTAPETTTASLATTAPETTTASLVTTAPEA-TTASLATTAPEA 577
Query: 315 VGSKEYLRKLI 347
+ E L+
Sbjct: 578 TTAPETTTALL 588
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 153 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 293
T +L+TTA + P+TTT E T TT T T+SL
Sbjct: 139 TTASLVTTAPEATTAPETTTAPEATTAPETTTASLVTTAPETTTASL 185
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 141 TLKETATNLLTTARTSLILPKTTTLMETA-TNLSTTVHITWTVPKADLTSSLPLSLVL 311
T+ +TAT+ T TS +L +T L+ T T+ +T+ H+T LTS+ ++ V+
Sbjct: 434 TVTDTATS--TAVVTSTVLVASTRLLSTVKTHTATSTHVTTATSTDTLTSTAIVTSVM 489
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +3
Query: 141 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 287
T TA N TT T+ TTT T +TT + T T P TS
Sbjct: 104 TATVTAPNATTTTPTATTTTTTTTTTTTPYATTTTPNTTTTTPNTTTTS 152
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 156 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 287
AT +TT ++ P TT TAT +TT T T P A T+
Sbjct: 96 ATATITTYTATVTAPNATTTTPTATTTTTTT-TTTTTPYATTTT 138
>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
Length = 587
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 153 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 263
T T TT T+ I TTT T TN +TTV+ T T
Sbjct: 545 TITTNYTTTVTTTITNYTTTFTITITNYTTTVNTTIT 581
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 138 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 269
PT ++T TNL +T R +TTT + + +TT T T+P
Sbjct: 188 PTTQQTTTNLPST-RQPTTNQQTTTTLPSTKQPTTTQQTTTTIP 230
>SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)
Length = 678
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 153 TATNLLTTART-SLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAV 317
T +L+T T L++ T L+ T + V IT T+P +T+ LPL ++ +
Sbjct: 278 TILHLVTITTTLPLVVITTILLLVVITTILPLVAITTTLPLVAITTILPLVVITTI 333
>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
Length = 249
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 165 LLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLA 314
+++T T+ TTT+ T T +TT+ IT T+ T + ++ ++
Sbjct: 133 IISTTTTTTSTANTTTITATITTTTTTITITATITTITTTITATITTTIS 182
>SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7)
Length = 122
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +3
Query: 141 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAV 317
T+ T T ++TT T++ + TT + T + TTV I T+ + +++ +++ +
Sbjct: 21 TMITTITVIITTMITTITITTTTIITTMITTIITTVIIIITITIITIITTIITTIITTI 79
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 159 TNLLTTARTSLILPKTTTLMETATNLSTTVH---ITWTVPKADLTSSLPL 299
T ++TT T+ I+ T T T T ++TTV IT T+ +T++ P+
Sbjct: 1086 TTIITTTITTTIITTTITTTITTTIITTTVTTTIITTTITTTIITTTDPI 1135
>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3
Query: 141 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKAD 278
T TAT TA T+ TTT T T +TT T T D
Sbjct: 22 TAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTKNND 67
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = +3
Query: 153 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 302
TATN TA +PKTTT ET TTV T D S+ +S
Sbjct: 357 TATN---TAPDKTAVPKTTTAPETTDASKTTVETQQTTYSRDPEISVTIS 403
>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
Length = 1165
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 153 TATNLLTTARTSLILPKTTTLMETA--TNLSTTVHITWTVPKADLTSSLPLSLVLAV 317
T T L T L L TTL+ T + V IT T+P +T++LPL ++ +
Sbjct: 541 TTTLPLVVITTILPLVTITTLLPLVVITTILPLVVITTTLPLVAITTTLPLVIITTI 597
>SB_10552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +2
Query: 137 ANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPT 295
A A +GY+ DN Y + NGY DN P P +K T
Sbjct: 382 AEAHVDGYQTYDNPTYDTEHETHAEAHVNGYPTYDNPTCDTHSPARAPAYKRT 434
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,652,314
Number of Sequences: 59808
Number of extensions: 376147
Number of successful extensions: 1400
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2621784220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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