Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D21
         (1255 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain...    33   2.2  
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     31   8.8  

>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
            protein protein.
          Length = 3567

 Score = 33.1 bits (72), Expect = 2.2
 Identities = 18/64 (28%), Positives = 21/64 (32%)
 Frame = +3

Query: 753  PLPXXPXPXLXXPPXPSXSQPXRXRILXXPPXXXXXPTXTAPPXXXSXXPXXPXAXPLRX 932
            P P  P P    PP PS   P +       P     PT   PP      P  P   P   
Sbjct: 1959 PPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSA 2018

Query: 933  PTRL 944
            P ++
Sbjct: 2019 PPQV 2022


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 31.1 bits (67), Expect = 8.8
 Identities = 25/85 (29%), Positives = 25/85 (29%)
 Frame = +3

Query: 753  PLPXXPXPXLXXPPXPSXSQPXRXRILXXPPXXXXXPTXTAPPXXXSXXPXXPXAXPLRX 932
            P P  P P L  PP P    P R   L  PP     P    PP      P      P   
Sbjct: 958  PPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHP-PPPPPLPPLLPPPQTRTLPAAR 1016

Query: 933  PTRLXNXXRXX*XXXPXXXRSPXLP 1007
              R     R      P   RSP  P
Sbjct: 1017 TMRQPPPPR---LALPRRRRSPPRP 1038


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,468,304
Number of Sequences: 237096
Number of extensions: 456138
Number of successful extensions: 1189
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17890024750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)