Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D20
         (935 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   6.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   7.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   7.9  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 504 IXDAIALFVTIISCNKQVNNNNCIHXMFQ 590
           I   +A+F+    C++    +NC+   FQ
Sbjct: 323 INAGLAIFILYFICDEAHYASNCLRVQFQ 351


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 483 KKCFICXIXDAIALFVTIISCNKQVN 560
           K C +C   + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = -1

Query: 530 YK*SNSITNXTNKAFFSLHFSCGLSKLINVFYH 432
           Y  +N   N TN+ ++ L+  C    ++ +F++
Sbjct: 41  YLLTNLTYNNTNRKYYWLNVCCLNLSIVTIFFN 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,418
Number of Sequences: 336
Number of extensions: 1966
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26271982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)