Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D19
         (902 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7667| Best HMM Match : DUF827 (HMM E-Value=0.33)                    32   0.73 
SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.2  
SB_44513| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-08)        30   2.9  
SB_30110| Best HMM Match : TFIIF_beta (HMM E-Value=2.5)                29   3.9  
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11)         29   3.9  
SB_8436| Best HMM Match : Cor1 (HMM E-Value=3.2)                       29   3.9  
SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.1  

>SB_7667| Best HMM Match : DUF827 (HMM E-Value=0.33)
          Length = 806

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 273 ETMTREMSAKEILNDFKENYIKFRKLLDEDSKNDPENAPYFSKYKAKEILNNMYVFLKTL 452
           E    E S  + L DFK++  + R+ LD+ +  DP+ A      K ++ +N+   +L   
Sbjct: 603 EIQDSEKSISKELRDFKQSLREVRQKLDDVTNKDPDEAERVELAKQEKAVNDWKEYLIEE 662

Query: 453 KTEG 464
            T G
Sbjct: 663 YTSG 666


>SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2271

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 652  IGILWSNRDDPEKAKASLVKAKTLYXDFKCTLQMPLPIEVIINYVGXTLID 804
            +G L  +R  PEK +  L+       DFKC +  P  +E   + +  TLID
Sbjct: 1637 LGDLNLDRLKPEKPEGKLLLDSEAEQDFKCLITQPTRVEKRGDVITKTLID 1687


>SB_44513| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-08)
          Length = 573

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 435 VFLKTLKTEGSPXR*YQTRCYDRICFVEHWYSRNG 539
           ++L  L +  +  R Y++RC+ R  F+  +YS NG
Sbjct: 371 IYLHVLTSNMAAMRFYESRCFQRFRFLPLYYSING 405


>SB_30110| Best HMM Match : TFIIF_beta (HMM E-Value=2.5)
          Length = 368

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 652 IGILWSNRDDPEKAKASLVKAKTLYXDFKCTLQMPLPIEVIINYVGXTLID 804
           +G L  +R  PEK +  L+       DFKC +  P  +E   + +  TLID
Sbjct: 42  LGDLNLDRLKPEKPEGKLLLDLEAEQDFKCLMTQPTRVEKRGDVITKTLID 92


>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2211

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 652 IGILWSNRDDPEKAKASLVKAKTLYXDFKCTLQMPLPIEVIINYVGXTLID 804
           +G L  +R  PEK +  L+       DFKC +  P  +E   + +  TLID
Sbjct: 355 LGDLNLDRLKPEKPEGKLLLDLEAEQDFKCLITQPTRVEKRGDVITKTLID 405


>SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11)
          Length = 887

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 652 IGILWSNRDDPEKAKASLVKAKTLYXDFKCTLQMPLPIEVIINYVGXTLID 804
           +G L  +R  PEK +  L+       DFKC +  P  +E   + +  TLID
Sbjct: 376 LGDLNLDRLKPEKPEGKLLLDLEAEQDFKCLITQPTRVEKRGDVITKTLID 426


>SB_8436| Best HMM Match : Cor1 (HMM E-Value=3.2)
          Length = 334

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 652 IGILWSNRDDPEKAKASLVKAKTLYXDFKCTLQMPLPIEVIINYVGXTLID 804
           +G L  +R  PEK +  L+       DFKC +  P  +E   + +  TLID
Sbjct: 35  LGDLNLDRLKPEKPEGKLLLDLEAEQDFKCLITQPTRVEKRGDVITKTLID 85


>SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1163

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
 Frame = +1

Query: 550 PTASEKSLNEAVDLLLENALKPEIVVTLI--NVYXNIGILWSNRDDPEKAKASLVKAKTL 723
           P    K L     +LLEN L        +  N    +G L  NR  P+K +  L+     
Sbjct: 41  PYRPPKPLTGNYQILLENELSDICNWASLQSNNVIPVGDLNLNRLRPDKPEGKLLPDLET 100

Query: 724 YXDFKCTLQMPLPIEVIINYVGXTLID 804
              F CT+  P  IE+  N +  + ID
Sbjct: 101 EQGFLCTITKPTRIEMRANKLTLSFID 127


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,063,698
Number of Sequences: 59808
Number of extensions: 368494
Number of successful extensions: 855
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2597949818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)