Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D19
         (902 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012180-1|AAH12180.1|  621|Homo sapiens KIAA1279 protein.             52   4e-06
AL359844-4|CAH72378.1|  621|Homo sapiens KIAA1279 protein.             52   4e-06
AB033105-1|BAA86593.1|  632|Homo sapiens KIAA1279 protein protein.     52   4e-06
AF030880-1|AAC51873.1|  780|Homo sapiens pendrin protein.              33   1.9  
AC078937-1|AAS02011.1|  334|Homo sapiens unknown protein.              33   1.9  

>BC012180-1|AAH12180.1|  621|Homo sapiens KIAA1279 protein.
          Length = 621

 Score = 51.6 bits (118), Expect = 4e-06
 Identities = 25/79 (31%), Positives = 44/79 (55%)
 Frame = +1

Query: 499 IGYVLLNIGIVEMDTEEPTASEKSLNEAVDLLLENALKPEIVVTLINVYXNIGILWSNRD 678
           +  +  ++G+  +DTEE +A E+ L + + LL    L  + +   I    N+GILWS R+
Sbjct: 94  LAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSERE 153

Query: 679 DPEKAKASLVKAKTLYXDF 735
           + E A+A L  ++ LY  +
Sbjct: 154 EIETAQAYLESSEALYNQY 172


>AL359844-4|CAH72378.1|  621|Homo sapiens KIAA1279 protein.
          Length = 621

 Score = 51.6 bits (118), Expect = 4e-06
 Identities = 25/79 (31%), Positives = 44/79 (55%)
 Frame = +1

Query: 499 IGYVLLNIGIVEMDTEEPTASEKSLNEAVDLLLENALKPEIVVTLINVYXNIGILWSNRD 678
           +  +  ++G+  +DTEE +A E+ L + + LL    L  + +   I    N+GILWS R+
Sbjct: 94  LAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSERE 153

Query: 679 DPEKAKASLVKAKTLYXDF 735
           + E A+A L  ++ LY  +
Sbjct: 154 EIETAQAYLESSEALYNQY 172


>AB033105-1|BAA86593.1|  632|Homo sapiens KIAA1279 protein protein.
          Length = 632

 Score = 51.6 bits (118), Expect = 4e-06
 Identities = 25/79 (31%), Positives = 44/79 (55%)
 Frame = +1

Query: 499 IGYVLLNIGIVEMDTEEPTASEKSLNEAVDLLLENALKPEIVVTLINVYXNIGILWSNRD 678
           +  +  ++G+  +DTEE +A E+ L + + LL    L  + +   I    N+GILWS R+
Sbjct: 105 LAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSERE 164

Query: 679 DPEKAKASLVKAKTLYXDF 735
           + E A+A L  ++ LY  +
Sbjct: 165 EIETAQAYLESSEALYNQY 183


>AF030880-1|AAC51873.1|  780|Homo sapiens pendrin protein.
          Length = 780

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = +1

Query: 619 IVVTLINVYXNIGILWSNRDDPEKAKASLV---KAKTLYXDFKCTLQMPLPIEVIINYVG 789
           I+ TL+ ++ NIG   +N  D      ++V     K L   F+  + +P+PIEVI+  + 
Sbjct: 253 IIYTLVEIFQNIGD--TNLADFTAGLLTIVVCMAVKELNDRFRHKIPVPIPIEVIVTIIA 310

Query: 790 XTLIDDFMYLEKSY 831
            T I     LEK+Y
Sbjct: 311 -TAISYGANLEKNY 323


>AC078937-1|AAS02011.1|  334|Homo sapiens unknown protein.
          Length = 334

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = +1

Query: 619 IVVTLINVYXNIGILWSNRDDPEKAKASLV---KAKTLYXDFKCTLQMPLPIEVIINYVG 789
           I+ TL+ ++ NIG   +N  D      ++V     K L   F+  + +P+PIEVI+  + 
Sbjct: 253 IIYTLVEIFQNIGD--TNLADFTAGLLTIVVCMAVKELNDRFRHKIPVPIPIEVIVTIIA 310

Query: 790 XTLIDDFMYLEKSY 831
            T I     LEK+Y
Sbjct: 311 -TAISYGANLEKNY 323


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,789,879
Number of Sequences: 237096
Number of extensions: 1614823
Number of successful extensions: 2948
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2948
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)