Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D18
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43701-1|AAB03210.1|  156|Homo sapiens ribosomal protein L23a pr...    45   3e-04
U37230-1|AAB17510.1|  156|Homo sapiens ribosomal protein L23a pr...    45   3e-04
U02032-1|AAA03341.1|  156|Homo sapiens ribosomal protein L23a pr...    45   3e-04
L13799-1|AAA35681.1|  147|Homo sapiens protein ( Homo sapiens (c...    45   3e-04
BC058041-1|AAH58041.1|  156|Homo sapiens ribosomal protein L23a ...    45   3e-04
BC014459-1|AAH14459.1|  156|Homo sapiens ribosomal protein L23a ...    45   3e-04
AF001689-1|AAC51934.1|  156|Homo sapiens ribosomal protein L23A ...    45   3e-04
BC098172-1|AAH98172.1|  130|Homo sapiens RPL23AP13 protein protein.    43   0.002
BC096740-1|AAH96740.1|  130|Homo sapiens RPL23AP13 protein protein.    43   0.002
BC096706-1|AAH96706.1|  130|Homo sapiens RPL23AP13 protein protein.    43   0.002
AC092839-2|AAX93105.1|  130|Homo sapiens unknown protein.              43   0.002
AE006463-8|AAK61228.1|  156|Homo sapiens 60S ribosomal protein L...    38   0.049

>U43701-1|AAB03210.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++ V+ G H  + +KI  S  FRRPKT      PKYP
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYP 61


>U37230-1|AAB17510.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++ V+ G H  + +KI  S  FRRPKT      PKYP
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYP 61


>U02032-1|AAA03341.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++ V+ G H  + +KI  S  FRRPKT      PKYP
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYP 61


>L13799-1|AAA35681.1|  147|Homo sapiens protein ( Homo sapiens
           (clone 01) liver expressed protein mRNA, 3'end. ).
          Length = 147

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++ V+ G H  + +KI  S  FRRPKT      PKYP
Sbjct: 11  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYP 52


>BC058041-1|AAH58041.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++ V+ G H  + +KI  S  FRRPKT      PKYP
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYP 61


>BC014459-1|AAH14459.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++ V+ G H  + +KI  S  FRRPKT      PKYP
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYP 61


>AF001689-1|AAC51934.1|  156|Homo sapiens ribosomal protein L23A
           protein.
          Length = 156

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 21/42 (50%), Positives = 26/42 (61%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++ V+ G H  + +KI  S  FRRPKT      PKYP
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYP 61


>BC098172-1|AAH98172.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++ V+ G HG + +KI  S  F+RPKT      P+YP
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYP 61


>BC096740-1|AAH96740.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++ V+ G HG + +KI  S  F+RPKT      P+YP
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYP 61


>BC096706-1|AAH96706.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++ V+ G HG + +KI  S  F+RPKT      P+YP
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYP 61


>AC092839-2|AAX93105.1|  130|Homo sapiens unknown protein.
          Length = 130

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++ V+ G HG + +KI  S  F+RPKT      P+YP
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYP 61


>AE006463-8|AAK61228.1|  156|Homo sapiens 60S ribosomal protein L23A
           like protein.
          Length = 156

 Score = 37.9 bits (84), Expect = 0.049
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +2

Query: 719 KALKAQRKVVXGXHGKRVRKIXXSVHFRRPKTFEPPXHPKYP 844
           KALKA++  + G H    +K   S+ F+RPKT      P+YP
Sbjct: 20  KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYP 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,450,298
Number of Sequences: 237096
Number of extensions: 800666
Number of successful extensions: 1343
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)