Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D15
         (1003 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.92 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   8.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   8.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   8.6  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 765 GGXPXGGXPPGGKP 724
           GG P GG PP G P
Sbjct: 66  GGPPSGGQPPQGMP 79



 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 725 GFPPGGXPPXGXPPGPXPP 781
           G P GG PP G P    PP
Sbjct: 67  GPPSGGQPPQGMPYPRFPP 85


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 655 KXGPGGXGPXGXTPPXGP 602
           K G GG G     PP GP
Sbjct: 523 KGGGGGSGSGNNQPPGGP 540


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -1

Query: 550 PPGKXPPXXGXPPXPP 503
           P G  PP  G  P PP
Sbjct: 226 PTGLIPPHPGLSPHPP 241


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -1

Query: 550 PPGKXPPXXGXPPXPP 503
           P G  PP  G  P PP
Sbjct: 118 PTGLIPPHPGLSPHPP 133


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/42 (30%), Positives = 14/42 (33%)
 Frame = -1

Query: 778 GXGTRXGAXXGXAPRGETPGXPXXARXGXXPTPGXGGXXXXK 653
           G  TR G       + ETPG P        PT    G    K
Sbjct: 306 GYTTREGMIVEMMRKNETPGMPNDFEEFVHPTVAKRGSITSK 347


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/42 (30%), Positives = 14/42 (33%)
 Frame = -1

Query: 778 GXGTRXGAXXGXAPRGETPGXPXXARXGXXPTPGXGGXXXXK 653
           G  TR G       + ETPG P        PT    G    K
Sbjct: 304 GYTTREGMIVEMMRKNETPGMPNDFEGFVHPTVAKRGSITSK 345


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/42 (30%), Positives = 14/42 (33%)
 Frame = -1

Query: 778 GXGTRXGAXXGXAPRGETPGXPXXARXGXXPTPGXGGXXXXK 653
           G  TR G       + ETPG P        PT    G    K
Sbjct: 306 GYTTREGMIVEMMRKNETPGMPNDFEEFVHPTVAKRGSITSK 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.152    0.544 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,122
Number of Sequences: 336
Number of extensions: 3061
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28547508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)