Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D14
(911 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 5e-50
SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 9e-27
SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 1e-20
SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 7e-20
SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27) 55 7e-08
SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_10343| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=0.00044) 50 2e-06
SB_47347| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=1e-17) 49 5e-06
SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72) 31 1.7
SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14) 31 1.7
SB_59648| Best HMM Match : Albicidin_res (HMM E-Value=0.63) 28 9.1
>SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 195 bits (475), Expect = 5e-50
Identities = 89/174 (51%), Positives = 126/174 (72%)
Frame = +3
Query: 237 PLTMLTEXELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYS 416
PLT L+E E M++++ + A E+I PLV +M+ ++D GI + LF+ GLMGIE EY
Sbjct: 38 PLTQLSEEEEMMKQSVARFAKEKIQPLVSEMDQNSQMDPGIIKGLFEQGLMGIEIGSEYG 97
Query: 417 GSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTEYAG 596
G+ F LV+EEL++VDP+V+ D+ NTL+N+L M GT+EQK++YL +L G
Sbjct: 98 GTDSTFFAANLVIEELAKVDPSVSVMCDVQNTLINNLIMTYGTKEQKQEYLPQLAQHMVG 157
Query: 597 SFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPS 758
FCL+E SSGSDAFALKTVA ++ H++++GSKMWI+N++ AGVFLVM N +PS
Sbjct: 158 GFCLSEESSGSDAFALKTVALEKDGHFVLNGSKMWITNAEYAGVFLVMANVNPS 211
>SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 118 bits (283), Expect = 9e-27
Identities = 64/192 (33%), Positives = 109/192 (56%), Gaps = 6/192 (3%)
Frame = +3
Query: 240 LTMLTEXELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQM---LFDNGLMGIETPVE 410
LT LT ++ +RE +++P +++ E+ +R+ L D G GI PV+
Sbjct: 38 LTGLTSEQIHLREVAYNFCQNELAPYADQIDKENNFPK-LREFWKKLGDLGFHGITVPVD 96
Query: 411 YSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-E 587
G G ++ ++V+EE+SRV ++A H+ L + + G +EQK+KYL KL + E
Sbjct: 97 DGGIGSGYMEHIIVLEEMSRVSGSIALSYGAHSNLCINQIARNGNKEQKRKYLPKLLSGE 156
Query: 588 YAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPS--X 761
+ G+ ++E ++GSD ++K A K+G+HY+++G KMWI+N A V +V +PS
Sbjct: 157 HIGALAMSEANAGSDVVSMKLRADKDGDHYVLNGHKMWITNGPDADVLIVYAKTNPSSKK 216
Query: 762 GYKGITCFIVER 797
IT F+VE+
Sbjct: 217 PEHAITTFLVEK 228
>SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 97.9 bits (233), Expect = 1e-20
Identities = 52/158 (32%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Frame = +3
Query: 240 LTMLTEXELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSG 419
L L E +R+T R A +++P+ K + EHR +ML + GL+G+E P G
Sbjct: 38 LAKLPETHEMLRKTCRDFADNELTPVAGKFDKEHRYPQEKVKMLGELGLLGVEVPESLGG 97
Query: 420 SGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTK-LCTEYAG 596
+G + + +EE+SR ++ + ++N GT+ QK++++ L + G
Sbjct: 98 TGLDAFAYAIAMEEISRGCASLGCIMSVNN---------YGTDAQKEEWIKPFLNGDRVG 148
Query: 597 SFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISN 710
F L+EP +GSDA A KT A +G+HY+++G+K WI+N
Sbjct: 149 CFALSEPDNGSDAGAAKTTAVLDGDHYVLNGTKAWITN 186
>SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 95.1 bits (226), Expect = 7e-20
Identities = 51/130 (39%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Frame = +3
Query: 417 GSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE-YA 593
G G L +V EELS + ++ N+L + G EEQKKKYL ++ E
Sbjct: 176 GIGLGVLDGCVVTEELSYACSGIQTAIEA-NSLAEMPVILAGNEEQKKKYLGRMIKEPIM 234
Query: 594 GSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSXGY-K 770
++C+TEP++GSD +KT A+K+G+ Y+I+G KMWI+N VA + V+ D S K
Sbjct: 235 AAYCVTEPTAGSDVAGIKTRAEKKGDEYVINGQKMWITNGGVANWYFVLARTDSSASAGK 294
Query: 771 GITCFIVERE 800
G T FIV+ +
Sbjct: 295 GFTGFIVDAD 304
>SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 82.2 bits (194), Expect = 5e-16
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 3/173 (1%)
Frame = +3
Query: 243 TMLTEXELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDN-GLMGIETPVEYSG 419
++ T+ + +RE + K ++I+P V + E F G G+ PV+Y G
Sbjct: 256 SIFTDDHVQLRENLNKFIEKEINPFVDEWEKAKMFPAHELFKKFGKAGYFGVNKPVKYGG 315
Query: 420 SGCNFLTMMLVVEELSRVD-PAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTK-LCTEYA 593
G ++ + + EEL + V + + + ++ G+EE K+++L + ++
Sbjct: 316 MGLDYSFSVAMAEELGSIKCGGVPMAIGVQADMATPALVRFGSEELKQQFLVPTIAGDFV 375
Query: 594 GSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNAD 752
++E +GSD ++KT A K+G+ Y+I+G KMW +N A ++ N D
Sbjct: 376 TCLGVSETGAGSDVASIKTTAVKDGDDYVINGGKMWTTNGIQADWMCLLANTD 428
>SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27)
Length = 257
Score = 55.2 bits (127), Expect = 7e-08
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +3
Query: 594 GSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTN 746
G ++E +GSD LKT AKK+G+ Y+I+GSKMWI+NS A ++ N
Sbjct: 3 GCIGVSEVGAGSDVAGLKTTAKKDGDDYVINGSKMWITNSPSADFICLLAN 53
>SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 52.0 bits (119), Expect = 6e-07
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +3
Query: 540 GTEEQKKKYLTKLCT-EYAGSFCLTEPS-SGSDAFALKTVAKKEGEHYIISGSKMWISNS 713
G+ EQKKK+L L E +FC+TEP + SDA ++ + G+HY+I+G K W S +
Sbjct: 138 GSPEQKKKWLDPLLNGEMRSAFCMTEPGVASSDATNMECKITRHGDHYVINGRKWWSSGA 197
>SB_10343| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=0.00044)
Length = 156
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +3
Query: 540 GTEEQKKKYLTKLCT-EYAGSFCLTEPS-SGSDAFALKTVAKKEGEHYIISGSKMWIS 707
G+ EQKKK+L L + +FC+TEP + SDA ++ + G+HY+I+G K W S
Sbjct: 98 GSPEQKKKWLDPLLNGDIRSAFCMTEPGVASSDATNMECKITRHGDHYVINGRKWWSS 155
>SB_47347| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=1e-17)
Length = 551
Score = 49.2 bits (112), Expect = 5e-06
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +3
Query: 417 GSGCNFLTMMLVVEELSRVDPAVAAY-VDIHNTLVNSLFMKLGTEEQKKKYLTKLCTEYA 593
G G + + EE+ R P+ + +T + ++ G++ QK+K+L L
Sbjct: 280 GPGLTNVEYAFICEEMGRCFPSSEVFNCSPPDTGNMEVLIRYGSDAQKEKWLEPLLDGRI 339
Query: 594 GS-FCLTEPS-SGSDAFALKTVAKKEGEHYIISGSKMWIS 707
S F +TEP + SDA +++ + +G+HY+++G K WIS
Sbjct: 340 RSCFAMTEPQVASSDAANIESSIRVDGDHYVLNGRKWWIS 379
>SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 48.4 bits (110), Expect = 8e-06
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Frame = +3
Query: 231 PRPLTMLTEXEL-AMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPV 407
P LT E EL A E + K E P K ++ +++ + + L + G G++ P
Sbjct: 17 PEVLTQDQEEELRAFVEPVSKFFEEVNDPA--KNDELETVEEHVMESLKEMGAFGLQVPA 74
Query: 408 EYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE 587
+ G G +VE + D AV + H ++ + G + K +
Sbjct: 75 DLGGVGLTNTQYARMVEIVGAHDLAVGIVLGAHQSIGFKGILLFGNKVATGK-------K 127
Query: 588 YAGSFCLTEPSSGSDA 635
YA +FCLTEPSSGSDA
Sbjct: 128 YA-AFCLTEPSSGSDA 142
>SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72)
Length = 298
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 285 RKLATEQISPLVKKMEDEHRIDDG 356
RK TEQ S L+K+M+DE +D G
Sbjct: 77 RKTETEQTSDLIKQMKDECAVDSG 100
>SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14)
Length = 490
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Frame = +3
Query: 498 DIHNTLVNSLFMKLGTEEQKKKYLTKL-CTEYAGSFCLTEPSSGSDAFALKTVA--KKEG 668
D+H + +GT+EQ++K+L + G+F TE G+ L+T A K+
Sbjct: 136 DLHRVMFMPTIKLMGTKEQQEKWLPLAEMHQILGTFAQTELGHGTFVRGLETTATYDKQT 195
Query: 669 EHYI-----ISGSKMWISN 710
+ ++ ++ SK W N
Sbjct: 196 QQFVLHSPSLTASKWWPGN 214
>SB_59648| Best HMM Match : Albicidin_res (HMM E-Value=0.63)
Length = 139
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +3
Query: 381 GLMGIETPVEYSGSG----CNFLTMMLVVEELSRVDP 479
G G+E P EY G C++L LV+EE DP
Sbjct: 90 GGYGLEIPCEYIFEGDSFSCSWLKRKLVIEEFDATDP 126
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,260,802
Number of Sequences: 59808
Number of extensions: 474255
Number of successful extensions: 1227
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2633701421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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