BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP02_F_D13 (902 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683... 93 2e-19 03_06_0324 + 33133081-33133260,33133381-33133481,33133665-331337... 29 6.7 04_03_0535 - 16850704-16853001,16854055-16854115,16854228-168543... 28 8.8 >07_03_0405 - 17767303-17767665,17767815-17768039,17768115-17768342, 17768607-17768621,17768622-17768810,17769106-17769213, 17769917-17770045 Length = 418 Score = 93.5 bits (222), Expect = 2e-19 Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 10/136 (7%) Frame = +2 Query: 491 SLDEVISNSLKGKELEEFNRIHYGRIDQCALFISSVAAQKAAS-----NGFEIKAYDFPA 655 SL ++ ++L + +E +R+ G C + +++ +A S + F+++A+ F A Sbjct: 28 SLHRLLQSNLSPELFKEASRLLLGL--NCGRALEAISLPEATSALAKAHNFDVQAFRFDA 85 Query: 656 RKEECRKPRIVRLGLIQHSIAISTDNPITQQRLAIFEKVQKIISAAAAXQVNILCLQ--- 826 KE R+PR++R+GLIQ+SIAI T + Q+ AI EKV+ +I AA VNILCLQ Sbjct: 86 DKEYLRQPRVIRVGLIQNSIAIPTTSHFADQKKAIMEKVKPMIDAAGDAGVNILCLQVSQ 145 Query: 827 --XAWNMPFAFCTXXK 868 AW MPFAFCT K Sbjct: 146 LSEAWTMPFAFCTREK 161 >03_06_0324 + 33133081-33133260,33133381-33133481,33133665-33133797, 33133936-33134027,33134309-33134408,33134505-33134577, 33134659-33134779,33135418-33135537,33136089-33136179, 33136288-33136305 Length = 342 Score = 28.7 bits (61), Expect = 6.7 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = +2 Query: 782 ISAAAAXQVNILCLQXAWNMPFAFCTXXKXHGV 880 +S ++ ++ C N PF FCT K H V Sbjct: 198 LSRSSDEKIECCCFSRDGNKPFLFCTLVKGHNV 230 >04_03_0535 - 16850704-16853001,16854055-16854115,16854228-16854323, 16854394-16854521,16855016-16855067,16855182-16855274, 16855473-16855590,16856456-16856609,16857512-16857643, 16859136-16859216,16859353-16859507,16860118-16860343, 16860423-16860507,16860593-16860689,16861785-16861949, 16862046-16862121,16863041-16863103,16863193-16863359, 16863495-16863669,16863743-16863835,16864694-16864810, 16865589-16865778,16866092-16866126 Length = 1618 Score = 28.3 bits (60), Expect = 8.8 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +2 Query: 551 IHYGRIDQCALFISSVAAQKAASNGFEIKAYDFPARKEECRK 676 I GR + L S + + S IKAY R E+CR+ Sbjct: 1194 ISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRR 1235 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,397,770 Number of Sequences: 37544 Number of extensions: 297974 Number of successful extensions: 502 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 496 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 501 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2553813320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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