Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D13
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683...    93   2e-19
03_06_0324 + 33133081-33133260,33133381-33133481,33133665-331337...    29   6.7  
04_03_0535 - 16850704-16853001,16854055-16854115,16854228-168543...    28   8.8  

>07_03_0405 -
           17767303-17767665,17767815-17768039,17768115-17768342,
           17768607-17768621,17768622-17768810,17769106-17769213,
           17769917-17770045
          Length = 418

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 10/136 (7%)
 Frame = +2

Query: 491 SLDEVISNSLKGKELEEFNRIHYGRIDQCALFISSVAAQKAAS-----NGFEIKAYDFPA 655
           SL  ++ ++L  +  +E +R+  G    C   + +++  +A S     + F+++A+ F A
Sbjct: 28  SLHRLLQSNLSPELFKEASRLLLGL--NCGRALEAISLPEATSALAKAHNFDVQAFRFDA 85

Query: 656 RKEECRKPRIVRLGLIQHSIAISTDNPITQQRLAIFEKVQKIISAAAAXQVNILCLQ--- 826
            KE  R+PR++R+GLIQ+SIAI T +    Q+ AI EKV+ +I AA    VNILCLQ   
Sbjct: 86  DKEYLRQPRVIRVGLIQNSIAIPTTSHFADQKKAIMEKVKPMIDAAGDAGVNILCLQVSQ 145

Query: 827 --XAWNMPFAFCTXXK 868
              AW MPFAFCT  K
Sbjct: 146 LSEAWTMPFAFCTREK 161


>03_06_0324 +
           33133081-33133260,33133381-33133481,33133665-33133797,
           33133936-33134027,33134309-33134408,33134505-33134577,
           33134659-33134779,33135418-33135537,33136089-33136179,
           33136288-33136305
          Length = 342

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 782 ISAAAAXQVNILCLQXAWNMPFAFCTXXKXHGV 880
           +S ++  ++   C     N PF FCT  K H V
Sbjct: 198 LSRSSDEKIECCCFSRDGNKPFLFCTLVKGHNV 230


>04_03_0535 - 16850704-16853001,16854055-16854115,16854228-16854323,
            16854394-16854521,16855016-16855067,16855182-16855274,
            16855473-16855590,16856456-16856609,16857512-16857643,
            16859136-16859216,16859353-16859507,16860118-16860343,
            16860423-16860507,16860593-16860689,16861785-16861949,
            16862046-16862121,16863041-16863103,16863193-16863359,
            16863495-16863669,16863743-16863835,16864694-16864810,
            16865589-16865778,16866092-16866126
          Length = 1618

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 551  IHYGRIDQCALFISSVAAQKAASNGFEIKAYDFPARKEECRK 676
            I  GR +   L  S +    + S    IKAY    R E+CR+
Sbjct: 1194 ISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRR 1235


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,397,770
Number of Sequences: 37544
Number of extensions: 297974
Number of successful extensions: 502
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)