BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP02_F_D12 (879 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 49 2e-05 D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 49 3e-05 X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for ... 35 0.45 X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA frag... 35 0.45 M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor pro... 35 0.45 Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 33 1.4 U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 33 1.4 AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4 AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4 AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4 AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4 AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4 AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4 AY130458-1|AAN05435.1| 1231|Homo sapiens fibulin 2 protein. 32 3.2 AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 31 4.2 >AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1-2843] protein. Length = 2843 Score = 49.2 bits (112), Expect = 2e-05 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%) Frame = +3 Query: 159 EYGCPENAHWT--DDPCVRTCDDPY-LTNTA-CVGALIQTCHCNDGLVFNADRKCVPISD 326 E CPEN+H+ PC +C P LT A C G ++ C C+ G V +ADR CVP+++ Sbjct: 1947 EITCPENSHYEVCGSPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSADR-CVPLNN 2005 >D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein protein. Length = 5405 Score = 48.8 bits (111), Expect = 3e-05 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%) Frame = +3 Query: 159 EYGCPENAHWT--DDPCVRTCDDPY-LTNTA-CVGALIQTCHCNDGLVFNADRKCVPISD 326 E CPEN+H+ PC +C P LT A C G ++ C C+ G V +ADR CVP+++ Sbjct: 1947 EITCPENSHYEVCGPPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSADR-CVPLNN 2005 Score = 48.8 bits (111), Expect = 3e-05 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%) Frame = +3 Query: 159 EYGCPENAHWT--DDPCVRTCDDPY-LTNTA-CVGALIQTCHCNDGLVFNADRKCVPISD 326 E CPEN+H+ PC +C P LT A C G ++ C C+ G V +ADR CVP+++ Sbjct: 3148 EITCPENSHYEVCGPPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSADR-CVPLNN 3206 Score = 48.8 bits (111), Expect = 3e-05 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%) Frame = +3 Query: 159 EYGCPENAHWT--DDPCVRTCDDPY-LTNTA-CVGALIQTCHCNDGLVFNADRKCVPISD 326 E CPEN+H+ PC +C P LT A C G ++ C C+ G V +ADR CVP+++ Sbjct: 4349 EITCPENSHYEVCGPPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSADR-CVPLNN 4407 >X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for pre-pro-von Willebrand factor. ). Length = 2813 Score = 34.7 bits (76), Expect = 0.45 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Frame = +3 Query: 126 VAVMALEASTTEYGCPENAHWTD--DPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNA 299 V V E E CP+ + PC TC + C A ++ C C GL + Sbjct: 638 VRVAWREPGRCELNCPKGQVYLQCGTPCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDE 697 Query: 300 DRKCVPISDC 329 CVP + C Sbjct: 698 RGDCVPKAQC 707 >X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA fragment (5'terminus) for von Willebrand factor (vWF). ). Length = 1400 Score = 34.7 bits (76), Expect = 0.45 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Frame = +3 Query: 126 VAVMALEASTTEYGCPENAHWTD--DPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNA 299 V V E E CP+ + PC TC + C A ++ C C GL + Sbjct: 638 VRVAWREPGRCELNCPKGQVYLQCGTPCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDE 697 Query: 300 DRKCVPISDC 329 CVP + C Sbjct: 698 RGDCVPKAQC 707 >M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor protein. Length = 2813 Score = 34.7 bits (76), Expect = 0.45 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Frame = +3 Query: 126 VAVMALEASTTEYGCPENAHWTD--DPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNA 299 V V E E CP+ + PC TC + C A ++ C C GL + Sbjct: 638 VRVAWREPGRCELNCPKGQVYLQCGTPCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDE 697 Query: 300 DRKCVPISDC 329 CVP + C Sbjct: 698 RGDCVPKAQC 707 >Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin) protein. Length = 3110 Score = 33.1 bits (72), Expect = 1.4 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = +3 Query: 165 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPIS 323 GCP +T C R C + Y + G Q C CND L F+ C +S Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLS 883 >U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein. Length = 3110 Score = 33.1 bits (72), Expect = 1.4 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = +3 Query: 165 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPIS 323 GCP +T C R C + Y + G Q C CND L F+ C +S Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLS 883 >AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin, congenital muscular dystrophy) protein. Length = 3122 Score = 33.1 bits (72), Expect = 1.4 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = +3 Query: 165 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPIS 323 GCP +T C R C + Y + G Q C CND L F+ C +S Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLS 883 >AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin, congenital muscular dystrophy) protein. Length = 3122 Score = 33.1 bits (72), Expect = 1.4 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = +3 Query: 165 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPIS 323 GCP +T C R C + Y + G Q C CND L F+ C +S Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLS 883 >AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin, congenital muscular dystrophy) protein. Length = 3122 Score = 33.1 bits (72), Expect = 1.4 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = +3 Query: 165 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPIS 323 GCP +T C R C + Y + G Q C CND L F+ C +S Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLS 883 >AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin, congenital muscular dystrophy) protein. Length = 3122 Score = 33.1 bits (72), Expect = 1.4 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = +3 Query: 165 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPIS 323 GCP +T C R C + Y + G Q C CND L F+ C +S Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLS 883 >AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin, congenital muscular dystrophy) protein. Length = 3122 Score = 33.1 bits (72), Expect = 1.4 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = +3 Query: 165 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPIS 323 GCP +T C R C + Y + G Q C CND L F+ C +S Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLS 883 >AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin, congenital muscular dystrophy) protein. Length = 3122 Score = 33.1 bits (72), Expect = 1.4 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = +3 Query: 165 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPIS 323 GCP +T C R C + Y + G Q C CND L F+ C +S Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLS 883 >AY130458-1|AAN05435.1| 1231|Homo sapiens fibulin 2 protein. Length = 1231 Score = 31.9 bits (69), Expect = 3.2 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 264 TCHCNDGLVFNADRKCVPISDC 329 T C DG + NA RKCV I++C Sbjct: 749 TVLCADGYILNAHRKCVDINEC 770 >AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein protein. Length = 1569 Score = 31.5 bits (68), Expect = 4.2 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = +3 Query: 201 CVRTCDDPYLTNTACVGALIQT-CHCNDGLVFNADRKCVPISDC 329 C TC T ACV + C C +GL NA +CVP +C Sbjct: 784 CAPTCQ-MLATGVACVPTKCEPGCVCAEGLYENAYGQCVPPEEC 826 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 89,356,146 Number of Sequences: 237096 Number of extensions: 1391137 Number of successful extensions: 2904 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2740 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2903 length of database: 76,859,062 effective HSP length: 90 effective length of database: 55,520,422 effective search space used: 11215125244 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -