BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP02_F_D11 (887 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 126 1e-27 UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 125 1e-27 UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 122 2e-26 UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 109 1e-22 UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 105 2e-21 UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 103 5e-21 UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 102 1e-20 UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 98 3e-19 UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 94 5e-18 UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 90 6e-17 UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 90 8e-17 UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 89 2e-16 UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 87 4e-16 UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 83 7e-15 UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 82 2e-14 UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 81 5e-14 UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 80 6e-14 UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 79 1e-13 UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plas... 79 2e-13 UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 78 3e-13 UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 77 5e-13 UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 76 1e-12 UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S protea... 73 1e-11 UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 73 1e-11 UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 67 5e-10 UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7; ... 66 1e-09 UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 64 3e-09 UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 59 2e-07 UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 58 2e-07 UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 58 3e-07 UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 58 4e-07 UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 57 7e-07 UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 56 9e-07 UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 56 2e-06 UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 54 4e-06 UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 54 4e-06 UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 54 6e-06 UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 51 3e-05 UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 51 3e-05 UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 50 6e-05 UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 50 1e-04 UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 49 2e-04 UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 48 4e-04 UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 47 7e-04 UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 46 0.001 UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 46 0.001 UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 45 0.003 UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 44 0.004 UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 44 0.004 UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 44 0.007 UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 44 0.007 UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 43 0.009 UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5; Thermopro... 43 0.009 UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 43 0.012 UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 43 0.012 UniRef50_Q6BG89 Cluster: Proteasome subunit beta type; n=3; Para... 41 0.037 UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 41 0.037 UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 41 0.037 UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 41 0.037 UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 40 0.064 UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=... 40 0.11 UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 39 0.15 UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2; Ostr... 39 0.20 UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 39 0.20 UniRef50_A0RWA6 Cluster: 20S proteasome, alpha and beta subunit;... 38 0.26 UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 38 0.34 UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 38 0.34 UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 38 0.34 UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2; Ostr... 37 0.60 UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Ence... 36 1.0 UniRef50_Q5DAM2 Cluster: Proteasome subunit beta type; n=1; Schi... 36 1.4 UniRef50_Q7XY60 Cluster: Proteasome chain protein; n=1; Griffith... 36 1.8 UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lambli... 35 2.4 UniRef50_A5B031 Cluster: Putative uncharacterized protein; n=1; ... 35 3.2 UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Olig... 35 3.2 UniRef50_Q60KD2 Cluster: Putative uncharacterized protein CBG241... 34 5.6 UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2; ... 34 5.6 UniRef50_A3V8G4 Cluster: Putative glycosyltransferase; n=3; Rhod... 33 9.7 UniRef50_Q5KHQ5 Cluster: Expressed protein; n=6; Tremellomycetes... 33 9.7 UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precurso... 33 9.7 >UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor; n=6; Endopterygota|Rep: Proteasome subunit beta type-1 precursor - Drosophila melanogaster (Fruit fly) Length = 235 Score = 126 bits (303), Expect = 1e-27 Identities = 54/86 (62%), Positives = 69/86 (80%) Frame = +1 Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558 T ++ RMQ YEH H ++MTT AVAQMLS +Y +RFFPYYVSN+LAG+D++GKG VYSY Sbjct: 85 TGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSY 144 Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636 DPIGHC + +RAGG+A LQP+L+ Sbjct: 145 DPIGHCEKATYRAGGTAGTLLQPVLD 170 Score = 120 bits (290), Expect = 4e-26 Identities = 60/104 (57%), Positives = 73/104 (70%) Frame = +3 Query: 144 ENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 323 E FP+Y VPG K F PY NGGSIVAIAGDD+AVI ADTRLS+G++I++R Q KLFKL Sbjct: 7 EQFPDYQVPGMKHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKL 66 Query: 324 SESTVLGATGCWCDTLTLXASSTSEDADVRTRA*QIYDHSGSRT 455 S TVLG+ GCW DTL+L S ++ R Q Y+H+ RT Sbjct: 67 SPQTVLGSAGCWADTLSLTGS-------IKVRM-QSYEHTHLRT 102 Score = 50.0 bits (114), Expect = 8e-05 Identities = 24/37 (64%), Positives = 27/37 (72%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 D FISAAERDIYTGDS+ I IIT GI+ LR+D Sbjct: 199 DTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235 >UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor; n=27; Eumetazoa|Rep: Proteasome subunit beta type-1 precursor - Homo sapiens (Human) Length = 241 Score = 125 bits (302), Expect = 1e-27 Identities = 52/86 (60%), Positives = 73/86 (84%) Frame = +1 Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558 T++++AR++MY+H +NK+MTT A+A MLST+LY +RFFPYYV N++ GLD +GKG VYS+ Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152 Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636 DP+G R +F+AGGSA+A LQPLL+ Sbjct: 153 DPVGSYQRDSFKAGGSASAMLQPLLD 178 Score = 86.6 bits (205), Expect = 7e-16 Identities = 39/69 (56%), Positives = 52/69 (75%) Frame = +3 Query: 171 GAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGAT 350 G Q RF PY NGG+I+AIAG+D+A++ +DTRLS GFSI+TRD K +KL++ TV+G + Sbjct: 24 GPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCS 83 Query: 351 GCWCDTLTL 377 G D LTL Sbjct: 84 GFHGDCLTL 92 Score = 56.0 bits (129), Expect = 1e-06 Identities = 25/37 (67%), Positives = 30/37 (81%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 DVFISAAERD+YTGD++ I I+T GI+EE LRKD Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241 Score = 33.1 bits (72), Expect = 9.7 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = +2 Query: 590 SALVVPLLHSCNRSSNNQIGLKNMQNVTEAPLTREKAL 703 SA++ PLL +NQ+G KNMQNV PL+ ++A+ Sbjct: 170 SAMLQPLL-------DNQVGFKNMQNVEHVPLSLDRAM 200 >UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14; Deuterostomia|Rep: Proteasome subunit beta type-1-A - Carassius auratus (Goldfish) Length = 238 Score = 122 bits (293), Expect = 2e-26 Identities = 50/86 (58%), Positives = 72/86 (83%) Frame = +1 Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558 T++++AR++MY+H +NKSMT+ A+A MLST+LY +RFFPYYV N++ GLD +G+G VYS+ Sbjct: 90 TKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSF 149 Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636 DP+G R ++AGGSA+A LQPLL+ Sbjct: 150 DPVGSYQRDTYKAGGSASAMLQPLLD 175 Score = 89.8 bits (213), Expect = 8e-17 Identities = 38/86 (44%), Positives = 60/86 (69%) Frame = +3 Query: 120 SYKMLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTR 299 S + N +Y G +H+F PYA NGG+++A+AG+D+A++ +DTRLS G+SI++R Sbjct: 4 SAQACGANGRMKDYHYTGPVEHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSR 63 Query: 300 DQKKLFKLSESTVLGATGCWCDTLTL 377 D K +KL+++TV+G +G D LTL Sbjct: 64 DSPKCYKLTDTTVIGCSGFHGDCLTL 89 Score = 55.2 bits (127), Expect = 2e-06 Identities = 26/37 (70%), Positives = 30/37 (81%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 DVFISAAERD+YTGD++ I IIT GI+EE LRKD Sbjct: 202 DVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238 Score = 36.7 bits (81), Expect = 0.79 Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Frame = +2 Query: 569 DTVRA--ITSALVVPLLHSCNRSSNNQIGLKNMQNVTEAPLTREKAL 703 DT +A SA++ PLL +NQIG KNM+NV + PL++EKA+ Sbjct: 158 DTYKAGGSASAMLQPLL-------DNQIGFKNMENVEQVPLSQEKAV 197 >UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza sativa|Rep: Proteasome subunit beta type-1 - Oryza sativa subsp. japonica (Rice) Length = 221 Score = 109 bits (261), Expect = 1e-22 Identities = 46/83 (55%), Positives = 62/83 (74%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567 L AR +Y+H+HNK M+ PA+AQ+LS LYYKRFFPYY NVL GLDS+GKGCV++YD + Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 131 Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636 G R + A G+ +A + P+L+ Sbjct: 132 GSYERTGYSAQGTGSALIMPVLD 154 Score = 62.9 bits (146), Expect = 1e-08 Identities = 27/52 (51%), Positives = 38/52 (73%) Frame = +3 Query: 198 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353 Y +NGG+ VAIAG DY V+ ADTRLS G++I TRD K+ +L++ L ++G Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSG 60 Score = 47.2 bits (107), Expect = 6e-04 Identities = 21/37 (56%), Positives = 26/37 (70%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 DVF SA ERDIYTGD + I++I G + E +LRKD Sbjct: 185 DVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221 >UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Viridiplantae|Rep: Proteasome subunit beta type-1 - Arabidopsis thaliana (Mouse-ear cress) Length = 223 Score = 105 bits (251), Expect = 2e-21 Identities = 43/85 (50%), Positives = 62/85 (72%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 ++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRFFPYY NVL GLD +GKGCV++YD Sbjct: 72 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 131 Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636 +G R + A GS + + P L+ Sbjct: 132 AVGSYERVGYGAQGSGSTLIMPFLD 156 Score = 75.4 bits (177), Expect = 2e-12 Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Frame = +3 Query: 177 KQH-RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353 KQH + PY +NGG+ VAIAG DY VI ADTR+STG+SI +RD K+ KL++ VL ++G Sbjct: 3 KQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSG 62 Query: 354 CWCDTLTL 377 D L Sbjct: 63 FQADVKAL 70 Score = 48.4 bits (110), Expect = 2e-04 Identities = 22/36 (61%), Positives = 27/36 (75%) Frame = +3 Query: 720 VFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 VF SA ERDIYTGD + I+I+ A GI+ E +LRKD Sbjct: 188 VFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223 >UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fungi/Metazoa group|Rep: Proteasome subunit beta type - Cryptococcus neoformans (Filobasidiella neoformans) Length = 272 Score = 103 bits (248), Expect = 5e-21 Identities = 43/89 (48%), Positives = 62/89 (69%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567 ++ R++ YEH HNK+M ++A+M+ TMLY KRFFPYYV N+L G++ DG G VYS+DP+ Sbjct: 90 VKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSFDPV 149 Query: 568 GHCARHNFRAGGSAAAQLQPLLEQSNWLK 654 G R RA G+A + +QP L+ + K Sbjct: 150 GSYEREACRAAGAAQSLIQPFLDNQVYFK 178 Score = 73.7 bits (173), Expect = 6e-12 Identities = 32/73 (43%), Positives = 49/73 (67%) Frame = +3 Query: 147 NFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLS 326 ++ ++A + H F PY+DNGGSI+AIAG D+++I DTR S G+SI TR +K+++L+ Sbjct: 10 SYQDHAAGPVQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLT 69 Query: 327 ESTVLGATGCWCD 365 + VL G D Sbjct: 70 DKVVLATNGFAAD 82 >UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycota|Rep: Proteasome component C5 - Ajellomyces capsulatus NAm1 Length = 266 Score = 102 bits (244), Expect = 1e-20 Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 1/92 (1%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567 L A ++MY+++H K M+ A AQ L+T+LY KRFFPYYV +LAG+D DGKG +YSYDP+ Sbjct: 108 LDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDEDGKGALYSYDPV 167 Query: 568 GHCARHNFRAGGSAAAQLQPLLE-QSNWLKEY 660 G R RA G+AA+ + P L+ Q N+ +Y Sbjct: 168 GSYEREYCRAAGAAASLIMPFLDNQVNFKNQY 199 Score = 66.1 bits (154), Expect = 1e-09 Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 1/59 (1%) Frame = +3 Query: 171 GAKQHR-FEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLG 344 G KQH F PY DNGGS + IAG DYA++ DTR +G++I TR KLFK+ E G Sbjct: 27 GPKQHHGFNPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDECG 85 Score = 39.9 bits (89), Expect = 0.085 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 D F SA ER I GD + +++IT GIQE L+KD Sbjct: 230 DAFTSAVERHIEVGDGLQVMVITREGIQEIYHPLKKD 266 >UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core eudicotyledons|Rep: Proteasome subunit RC5 like - Arabidopsis thaliana (Mouse-ear cress) Length = 85 Score = 97.9 bits (233), Expect = 3e-19 Identities = 40/74 (54%), Positives = 56/74 (75%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 ++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRFFPYY NVL GLD +GKGCV++YD Sbjct: 1 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 60 Query: 562 PIGHCARHNFRAGG 603 +G R + A G Sbjct: 61 AVGSYERVGYGAQG 74 >UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica; n=1; Yarrowia lipolytica|Rep: Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica - Yarrowia lipolytica (Candida lipolytica) Length = 238 Score = 93.9 bits (223), Expect = 5e-18 Identities = 39/83 (46%), Positives = 58/83 (69%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567 ++ +++Y +++NK + + A+ + MLY KRFFPYYV ++AGLD +GKG VYSYDP+ Sbjct: 93 IKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDEEGKGAVYSYDPV 152 Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636 G R RAGGSAA+ + P L+ Sbjct: 153 GSYEREFCRAGGSAASLVMPFLD 175 Score = 44.4 bits (100), Expect = 0.004 Identities = 23/62 (37%), Positives = 36/62 (58%) Frame = +3 Query: 180 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 359 +HRF PY GDD+A++ DTR +TG+SI +R Q K+F + ++ ++ A G Sbjct: 34 EHRFNPYG----------GDDFALLAGDTRNTTGYSINSRYQPKVFDVGDNILVTANGFS 83 Query: 360 CD 365 D Sbjct: 84 AD 85 Score = 42.7 bits (96), Expect = 0.012 Identities = 18/37 (48%), Positives = 26/37 (70%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 D F SA ER I+ GD + ILI+T G+++E F L++D Sbjct: 202 DAFSSATERHIHVGDGLEILIVTKEGVRKEFFPLKRD 238 >UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Metazoa group|Rep: Proteasome component C5 - Saccharomyces cerevisiae (Baker's yeast) Length = 241 Score = 90.2 bits (214), Expect = 6e-17 Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 2/89 (2%) Frame = +1 Query: 400 MQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHC 576 ++ Y +HN K ++ + A+ + +LY KRFFPYYV ++AGLD DGKG VYS+DP+G Sbjct: 91 VKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSY 150 Query: 577 ARHNFRAGGSAAAQLQPLLE-QSNWLKEY 660 R RAGG+AA+ + P L+ Q N+ +Y Sbjct: 151 EREQCRAGGAAASLIMPFLDNQVNFKNQY 179 Score = 65.7 bits (153), Expect = 1e-09 Identities = 28/62 (45%), Positives = 42/62 (67%) Frame = +3 Query: 180 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 359 +H+F PY DNGG+I+ IAG+D+AV+ DTR T +SI +R + K+F ++ V+ A G Sbjct: 18 EHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFA 77 Query: 360 CD 365 D Sbjct: 78 AD 79 Score = 41.9 bits (94), Expect = 0.021 Identities = 18/37 (48%), Positives = 26/37 (70%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 D F SA ER I GD + ILI+T G+++E +EL++D Sbjct: 205 DSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241 >UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dictyostelium discoideum|Rep: Proteasome subunit beta type - Dictyostelium discoideum AX4 Length = 236 Score = 89.8 bits (213), Expect = 8e-17 Identities = 38/83 (45%), Positives = 57/83 (68%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567 L++ ++ +E EH K M+TPA+AQ LS LYYKRFFPYY N++AG+D G+G +++YD + Sbjct: 90 LKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEQGEGWIWTYDAV 149 Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636 G R + + GS + PLL+ Sbjct: 150 GSHERVKYSSQGSGNQLVIPLLD 172 Score = 70.5 bits (165), Expect = 5e-11 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Frame = +3 Query: 186 RFEPYADNGGSIVAIAGDDYAVIGADTRLST-GFSIYTRDQKKLFKLSESTVLGATGCWC 362 RFE Y DNGG+++A+AG DY VI DTR+S G+ I TR K+F+L++ VL +G Sbjct: 22 RFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQA 81 Query: 363 DTLTL 377 DT+ L Sbjct: 82 DTIAL 86 Score = 42.7 bits (96), Expect = 0.012 Identities = 19/37 (51%), Positives = 25/37 (67%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 D SA ERDIYTGD I+++ +G+ EKFEL+ D Sbjct: 200 DSITSAGERDIYTGDFADIVVVDKNGVHWEKFELKLD 236 >UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryptosporidium|Rep: Proteasome subunit beta type - Cryptosporidium parvum Iowa II Length = 246 Score = 88.6 bits (210), Expect = 2e-16 Identities = 40/85 (47%), Positives = 58/85 (68%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 + L A++++YE EHNK+ + A+AQ+LS +LY KRFFPYY +L+GLD GKG VY YD Sbjct: 101 KTLLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDEQGKGVVYGYD 160 Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636 +G +H F A GS + + +L+ Sbjct: 161 AVGSFDQHKFVALGSGGSLITSILD 185 Score = 65.3 bits (152), Expect = 2e-09 Identities = 30/65 (46%), Positives = 40/65 (61%) Frame = +3 Query: 171 GAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGAT 350 G +H F PY +NGGS VA+AGDD+ VI ADTRLS + I +R K +L+ +L + Sbjct: 31 GKIEHSFNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACS 90 Query: 351 GCWCD 365 G D Sbjct: 91 GMLAD 95 Score = 38.7 bits (86), Expect = 0.20 Identities = 16/37 (43%), Positives = 24/37 (64%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 D SA+ERD++TGDS +++I + GI LR+D Sbjct: 210 DSITSASERDVHTGDSAEVIVIDSSGISVSSLRLRED 246 >UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Caenorhabditis|Rep: Proteasome subunit beta type-1 - Caenorhabditis elegans Length = 258 Score = 87.4 bits (207), Expect = 4e-16 Identities = 37/85 (43%), Positives = 54/85 (63%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 ++LQ+R+ Y ++ M+ A++LS LYY+RFFPYY +LAG+D GKG V+SYD Sbjct: 109 KVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFSYD 168 Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636 PIG R + A G+A + P L+ Sbjct: 169 PIGCIERLGYSASGAAEPMIIPFLD 193 Score = 53.6 bits (123), Expect = 6e-06 Identities = 24/68 (35%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Frame = +3 Query: 177 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLS-TGFSIYTRDQKKLFKLSESTVLGATG 353 ++ R+ PY+ GGS AI+G+++A++ +DTR++ +I TRD +K+ L+++ +L +G Sbjct: 40 ERQRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSG 99 Query: 354 CWCDTLTL 377 + D L L Sbjct: 100 FYGDVLQL 107 >UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; Emericella nidulans|Rep: Putative uncharacterized protein - Emericella nidulans (Aspergillus nidulans) Length = 215 Score = 83.4 bits (197), Expect = 7e-15 Identities = 36/83 (43%), Positives = 56/83 (67%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567 L A + MY+++H K++ A AQ +STMLY KRFFPY + ++AG+D+DG+G +Y YDP Sbjct: 77 LDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDADGQGAIYYYDPA 136 Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636 G + + A G A++ + P L+ Sbjct: 137 GCIEKRSHCAAGEASSLMLPFLD 159 Score = 56.0 bits (129), Expect = 1e-06 Identities = 21/53 (39%), Positives = 37/53 (69%) Frame = +3 Query: 174 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSES 332 AK+ RF PY NGG+ + ++G D+A++ DTR + G++I TR + K+F + ++ Sbjct: 2 AKETRFYPYTSNGGATLGVSGPDFAILAGDTRSTAGYNINTRYEPKVFTIQDA 54 Score = 37.1 bits (82), Expect = 0.60 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 D + A ER I GD + +L++T G+ E+ +L+KD Sbjct: 179 DAYTGATERHIEVGDHLQMLVVTREGVSEQLVDLKKD 215 >UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Trypanosomatidae|Rep: Proteasome subunit beta type-1 - Trypanosoma brucei brucei Length = 258 Score = 82.2 bits (194), Expect = 2e-14 Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 1/86 (1%) Frame = +1 Query: 382 RLLQARMQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558 ++L+ R+Q Y++ + K +T A+A++ STMLY +RFFPYY N++ G+D G G YSY Sbjct: 110 QMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCYSY 169 Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636 DP+G + GSA++ ++PLL+ Sbjct: 170 DPVGSTEPFRYGTCGSASSFVEPLLD 195 Score = 73.3 bits (172), Expect = 7e-12 Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 3/72 (4%) Frame = +3 Query: 171 GAKQH--RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTR-DQKKLFKLSESTVL 341 GAK H + PY DNGG+I AIAG +Y V+GADTRL+ F I+TR D KLFKL++ L Sbjct: 37 GAKGHPQHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFL 96 Query: 342 GATGCWCDTLTL 377 ++G D L L Sbjct: 97 ASSGMQADRLQL 108 Score = 48.4 bits (110), Expect = 2e-04 Identities = 22/37 (59%), Positives = 27/37 (72%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 + F AAERDI+TGD++ IITA G+ E FELRKD Sbjct: 222 NAFTGAAERDIFTGDTVCFHIITADGVGTEMFELRKD 258 >UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3; Piroplasmida|Rep: Proteasome beat subunit, putative - Theileria parva Length = 218 Score = 80.6 bits (190), Expect = 5e-14 Identities = 33/84 (39%), Positives = 57/84 (67%) Frame = +1 Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 564 +L+ ++++Y + HN+ T A+AQ+LST+LY +RFFPYY N+L G+D GKG V YD Sbjct: 73 VLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGKGVVCGYDA 132 Query: 565 IGHCARHNFRAGGSAAAQLQPLLE 636 +G+ + A G++++ + +L+ Sbjct: 133 VGNYNYEKYTAQGTSSSLVISVLD 156 Score = 72.1 bits (169), Expect = 2e-11 Identities = 32/66 (48%), Positives = 45/66 (68%) Frame = +3 Query: 180 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 359 + RF PY +NGG+++A ++YAVI ADTRLS + I+TR KLFKL++ +LG +G Sbjct: 5 EERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGTSGMQ 64 Query: 360 CDTLTL 377 D L L Sbjct: 65 ADMLAL 70 >UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family protein; n=1; Tetrahymena thermophila SB210|Rep: Proteasome A-type and B-type family protein - Tetrahymena thermophila SB210 Length = 247 Score = 80.2 bits (189), Expect = 6e-14 Identities = 36/87 (41%), Positives = 52/87 (59%) Frame = +1 Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558 ++ L AR+ MY++ + K A+A +LS LYYKRFFPYY N+LAG D G+G V +Y Sbjct: 99 SKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDDKGEGLVINY 158 Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLEQ 639 D +G + GS A + P+ +Q Sbjct: 159 DAVGSGDFKKYAVLGSGAQLITPVFDQ 185 Score = 61.3 bits (142), Expect = 3e-08 Identities = 26/68 (38%), Positives = 42/68 (61%) Frame = +3 Query: 174 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353 AK++ F PY N G++ AIA D+ ++ D R+S G+SI +RD KL +L+++ L +G Sbjct: 31 AKRNEFNPYVFNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSG 90 Query: 354 CWCDTLTL 377 + D L Sbjct: 91 MYADFAAL 98 Score = 37.5 bits (83), Expect = 0.45 Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQE-EKFELRKD 827 D F SA ERDIYTGD + I+I+ E + F LRKD Sbjct: 210 DCFESATERDIYTGDQLEIVILRKDKAPEYQLFPLRKD 247 >UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole genome shotgun sequence; n=2; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_12, whole genome shotgun sequence - Paramecium tetraurelia Length = 239 Score = 79.4 bits (187), Expect = 1e-13 Identities = 40/99 (40%), Positives = 58/99 (58%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 + LQ R+Q+YE ++ +T VA +LS LY +RFFPYY N+LAGLD + G VY YD Sbjct: 93 KFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDENNHGVVYGYD 152 Query: 562 PIGHCARHNFRAGGSAAAQLQPLLEQSNWLKEYAECNRS 678 IG + + GS + +L+ N LK Y + N++ Sbjct: 153 AIGSYDQMTYGVQGSGQELVVAVLD--NQLKGYNKINKT 189 Score = 56.4 bits (130), Expect = 9e-07 Identities = 24/67 (35%), Positives = 40/67 (59%) Frame = +3 Query: 177 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGC 356 K ++ PY DN G+++A+ ++ DTRLS G++I +RD KL +L++ VL G Sbjct: 25 KSDQWSPYHDNSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQ 84 Query: 357 WCDTLTL 377 + D + L Sbjct: 85 YADFIAL 91 Score = 43.6 bits (98), Expect = 0.007 Identities = 22/37 (59%), Positives = 26/37 (70%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 D F AAERDI+TGD++ ILIITA G + LRKD Sbjct: 203 DCFSCAAERDIHTGDNVEILIITAAGTERIVKPLRKD 239 >UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plasmodium|Rep: Proteasome subunit beta type - Plasmodium berghei Length = 267 Score = 78.6 bits (185), Expect = 2e-13 Identities = 33/86 (38%), Positives = 56/86 (65%) Frame = +1 Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558 +++LQ ++Q++ EH+ + +A++L LY +RFFPYY N+LAG+D +GKG +YSY Sbjct: 120 SKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYSY 179 Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636 D IG + GS ++ + P+L+ Sbjct: 180 DAIGSYYQSTHACTGSGSSLILPILD 205 Score = 70.5 bits (165), Expect = 5e-11 Identities = 32/84 (38%), Positives = 52/84 (61%) Frame = +3 Query: 126 KMLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQ 305 K NE E+A P R+ PY DNGG+++ + G++Y ++ DTRLS +SIYTR+ Sbjct: 14 KKTEENEAAIEHARPSK---RWNPYIDNGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNC 70 Query: 306 KKLFKLSESTVLGATGCWCDTLTL 377 K+ K+++ ++G++G D TL Sbjct: 71 PKISKITDKCIIGSSGMQSDIKTL 94 Score = 36.3 bits (80), Expect = 1.0 Identities = 18/37 (48%), Positives = 21/37 (56%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 D SA ERDIYTGD I II GI +L++D Sbjct: 231 DAMTSATERDIYTGDKAEIYIIDNLGINTTLLDLKQD 267 >UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta subunit - Entamoeba histolytica HM-1:IMSS Length = 226 Score = 77.8 bits (183), Expect = 3e-13 Identities = 35/86 (40%), Positives = 53/86 (61%) Frame = +1 Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558 T ++A ++ Y++E+ K M+T +VAQ+LS LY RFFPYY ++LAG++S GK Y+Y Sbjct: 84 TDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNY 143 Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636 D +G + GS PLL+ Sbjct: 144 DAVGSFEERKYSCSGSGEELAYPLLD 169 Score = 56.8 bits (131), Expect = 7e-07 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%) Frame = +3 Query: 141 NENFPEYAVPGAK-QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLF 317 N+ F + V AK + ++ PY DN G+ V I G+D+ VI +DTR+S + I TR+ K++ Sbjct: 4 NKMFTQQPVREAKNKDQWSPYEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIY 63 Query: 318 KLSESTVLGATGCWCD 365 L+ V +G D Sbjct: 64 PLTSKCVFTGSGMRAD 79 Score = 39.9 bits (89), Expect = 0.085 Identities = 17/37 (45%), Positives = 27/37 (72%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 DV SA ERDI+TGD++ I+I+ ++GI++E + D Sbjct: 190 DVMTSACERDIHTGDNVEIVILNSNGIRKEVHFMASD 226 >UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia lamblia ATCC 50803|Rep: Proteasome subunit beta type - Giardia lamblia ATCC 50803 Length = 254 Score = 77.4 bits (182), Expect = 5e-13 Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 3/111 (2%) Frame = +1 Query: 352 AAGVTH*PXTRLLQ-ARMQMYEH--EHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAG 522 AA H RLL+ +++ E+ + K + ++LS M+YY+R FP+Y S+++AG Sbjct: 99 AASGMHADVQRLLKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAG 158 Query: 523 LDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLEQSNWLKEYAECNR 675 +DS+G+G VYSYD IG R + + G+ A + P+L+++ K AE R Sbjct: 159 IDSEGRGAVYSYDVIGSTLRTRYGSAGTGNAMICPILDEAILSKNEAEITR 209 Score = 72.5 bits (170), Expect = 1e-11 Identities = 33/78 (42%), Positives = 50/78 (64%) Frame = +3 Query: 144 ENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 323 + PE + K F+PY DNGG+I+AIAG D+A+I DTRLS G++I +R+ +K+F + Sbjct: 33 KKMPEVSNAPLKDPDFDPYIDNGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPV 92 Query: 324 SESTVLGATGCWCDTLTL 377 ++ V A+G D L Sbjct: 93 TDKIVYAASGMHADVQRL 110 Score = 52.0 bits (119), Expect = 2e-05 Identities = 24/35 (68%), Positives = 27/35 (77%) Frame = +3 Query: 723 FISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 F S AERDIYTGDS+ + I+A GIQE FELRKD Sbjct: 220 FRSCAERDIYTGDSVVAMCISADGIQERTFELRKD 254 >UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Trichomonas vaginalis G3|Rep: Proteasome subunit beta type - Trichomonas vaginalis G3 Length = 224 Score = 75.8 bits (178), Expect = 1e-12 Identities = 31/78 (39%), Positives = 53/78 (67%) Frame = +1 Query: 409 YEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHN 588 YE++H M+ +VA+ +S LY KRFFPYY++ ++ G++S+GKG +Y YDP+G + Sbjct: 86 YENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGINSEGKGKLYGYDPVGTIEDLH 145 Query: 589 FRAGGSAAAQLQPLLEQS 642 + + GS ++ PLL+ + Sbjct: 146 YDSNGSGSSLAAPLLDSA 163 Score = 64.9 bits (151), Expect = 3e-09 Identities = 27/59 (45%), Positives = 43/59 (72%) Frame = +3 Query: 177 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353 K+ ++ PY +GG+ + I GDDY VIGADTRLS +SI +R + ++FK++ + ++ ATG Sbjct: 9 KKGQWSPYEMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATG 67 Score = 37.9 bits (84), Expect = 0.34 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFEL 818 D S ERDIYTGD++ + + T G +E+F L Sbjct: 188 DAICSVTERDIYTGDALQLCVFTKDGFAQEEFPL 221 >UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S proteasome beta 6 subunit; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to 20S proteasome beta 6 subunit - Strongylocentrotus purpuratus Length = 165 Score = 72.9 bits (171), Expect = 1e-11 Identities = 34/61 (55%), Positives = 44/61 (72%) Frame = +3 Query: 141 NENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFK 320 +E P Y +Q RF PY NGG+I+A+AGDDYA+I +DTRLS GFSI+TRD K ++ Sbjct: 8 HETVPSYHP--VEQQRFNPYTFNGGTIMAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYR 65 Query: 321 L 323 L Sbjct: 66 L 66 Score = 54.8 bits (126), Expect = 3e-06 Identities = 24/37 (64%), Positives = 30/37 (81%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 DVFISAAERDIYTGD I + ++T G +EE+F LR+D Sbjct: 129 DVFISAAERDIYTGDGIVLHVLTKDGCKEERFPLRRD 165 Score = 53.6 bits (123), Expect = 6e-06 Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 7/48 (14%) Frame = +1 Query: 535 GKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLE-------QSNWLKE 657 GKGCVYS+DP+G R +RA GS++A LQPLL+ Q W+KE Sbjct: 69 GKGCVYSFDPVGSYERETYRAAGSSSALLQPLLDNQIGGKNQEGWVKE 116 >UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plasmodium vivax|Rep: Proteasome subunit beta type - Plasmodium vivax Length = 241 Score = 72.5 bits (170), Expect = 1e-11 Identities = 29/64 (45%), Positives = 44/64 (68%) Frame = +3 Query: 186 RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCD 365 R+ PY DNGG+++ + G DY ++ ADTRLS +SIYTR K+ KL++ ++G++G D Sbjct: 30 RWNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSD 89 Query: 366 TLTL 377 TL Sbjct: 90 IKTL 93 Score = 70.1 bits (164), Expect = 7e-11 Identities = 31/84 (36%), Positives = 51/84 (60%) Frame = +1 Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 564 LL+ +++++ EH +A++L +LY +RFFPYY N+LAG+ +D KG +Y+YD Sbjct: 96 LLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDSKGVLYNYDA 155 Query: 565 IGHCARHNFRAGGSAAAQLQPLLE 636 IG GS +A + P+L+ Sbjct: 156 IGSYCEATHSCVGSGSALILPILD 179 Score = 40.3 bits (90), Expect = 0.064 Identities = 19/37 (51%), Positives = 22/37 (59%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 D SA ERDIYTGDS I II G+ EL++D Sbjct: 205 DAITSATERDIYTGDSTEIYIIDQMGVNTTSLELKQD 241 >UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase complex - Thermofilum pendens (strain Hrk 5) Length = 204 Score = 67.3 bits (157), Expect = 5e-10 Identities = 37/92 (40%), Positives = 56/92 (60%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 R+++A M++YE + N S VA++LS +LY +R FPYY V+ GLD +G +YS D Sbjct: 62 RIVEAEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSH-LYSLD 120 Query: 562 PIGHCARHNFRAGGSAAAQLQPLLEQSNWLKE 657 PIG ++ A GS QL + +SN+ K+ Sbjct: 121 PIGAIIEDDYVALGS-GTQLAISIVESNYKKD 151 >UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7; n=1; Candida albicans|Rep: Putative uncharacterized protein PRE7 - Candida albicans (Yeast) Length = 127 Score = 66.1 bits (154), Expect = 1e-09 Identities = 27/66 (40%), Positives = 44/66 (66%) Frame = +3 Query: 180 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 359 +HRF PY+DNGG+++ IAG+D+AV+ DTR G+SI +R + K+ + + ++ A G Sbjct: 22 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDDILMTANGFA 81 Query: 360 CDTLTL 377 D + L Sbjct: 82 ADGVAL 87 >UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1; Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE SUBUNIT - Encephalitozoon cuniculi Length = 290 Score = 64.5 bits (150), Expect = 3e-09 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 4/86 (4%) Frame = +1 Query: 403 QMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAR 582 ++ ++E + S+ + A +LS +LY KRFFPYY VL+G + GK VYSYDPIG Sbjct: 151 EIRQYEVDDSINIHSAANLLSKILYSKRFFPYYSFCVLSGFEK-GKPYVYSYDPIGSFGS 209 Query: 583 HNFRAGGSAAAQLQPLL----EQSNW 648 GS + +QPLL ++ NW Sbjct: 210 VTCVCSGSGRSMIQPLLDSFIDKKNW 235 Score = 51.6 bits (118), Expect = 3e-05 Identities = 22/63 (34%), Positives = 38/63 (60%) Frame = +3 Query: 180 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 359 + RF+PY DN G+ + + D+ V+ DTR S+ I +R+ K+F++ + + G TG + Sbjct: 80 KERFDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTG-TGFY 138 Query: 360 CDT 368 DT Sbjct: 139 ADT 141 Score = 33.9 bits (74), Expect = 5.6 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = +3 Query: 723 FISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 F SAAERD+ T D++ + ++ + + E F LR+D Sbjct: 256 FNSAAERDVKTKDNLEVCVMRENQVMRETFPLRRD 290 >UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostreococcus tauri|Rep: Proteasome subunit beta type - Ostreococcus tauri Length = 203 Score = 58.8 bits (136), Expect = 2e-07 Identities = 29/61 (47%), Positives = 37/61 (60%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567 L+ + MYE N+ M+ A ++ST LY KRF PYY V+AGLD DGK + S D I Sbjct: 66 LRFKHDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDKDGKPYITSMDLI 125 Query: 568 G 570 G Sbjct: 126 G 126 >UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum pernix|Rep: Proteasome beta subunit - Aeropyrum pernix Length = 203 Score = 58.4 bits (135), Expect = 2e-07 Identities = 28/85 (32%), Positives = 48/85 (56%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 R+++ +M++ E K T VA+ LS++LY +FFP+ V ++ G+D G+ +Y D Sbjct: 62 RIVEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDPGGEPKLYVLD 121 Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636 P+G ++ A G+ A LLE Sbjct: 122 PLGSIIEEDYVAAGTGATTAFGLLE 146 >UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome subunit beta-type; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to proteasome subunit beta-type - Strongylocentrotus purpuratus Length = 104 Score = 58.0 bits (134), Expect = 3e-07 Identities = 24/36 (66%), Positives = 30/36 (83%) Frame = +1 Query: 433 MTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGK 540 M T A+A MLST+LYY+RFFPYY N+LAGLD +G+ Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGE 36 Score = 54.8 bits (126), Expect = 3e-06 Identities = 24/37 (64%), Positives = 30/37 (81%) Frame = +3 Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827 DVFISAAERDIYTGD I + ++T G +EE+F LR+D Sbjct: 68 DVFISAAERDIYTGDGIVLHVLTKDGCKEERFPLRRD 104 >UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guillardia theta|Rep: Proteasome subunit beta type - Guillardia theta (Cryptomonas phi) Length = 239 Score = 57.6 bits (133), Expect = 4e-07 Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%) Frame = +3 Query: 138 VNENFPEYAVPGAKQHR-FEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKL 314 +N N Y + +R F+PY +NGG ++AI G+ + V+ +DTR+S G+SI +R ++ Sbjct: 12 LNFNIKTYNLNFKSLNRNFDPYQNNGGLVLAITGNKFCVMASDTRISMGYSIPSRLNLRI 71 Query: 315 FKLSESTVLGATGCWCD 365 K+S +LG++G D Sbjct: 72 LKISNLCLLGSSGMISD 88 Score = 50.4 bits (115), Expect = 6e-05 Identities = 21/72 (29%), Positives = 40/72 (55%) Frame = +1 Query: 421 HNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAG 600 +N + + + S++LY +RFFP+Y N+L G++ GK Y+YD IG ++ Sbjct: 107 NNTELNLNGIVYLTSSLLYSRRFFPFYTFNILTGINELGKASNYTYDAIGSFDCNHASTV 166 Query: 601 GSAAAQLQPLLE 636 G+ + Q +++ Sbjct: 167 GNCQSSAQCIMD 178 >UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schistosoma japonicum|Rep: Proteasome subunit beta type - Schistosoma japonicum (Blood fluke) Length = 209 Score = 56.8 bits (131), Expect = 7e-07 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 6/100 (6%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 564 LQ R MYE N+++ + MLS +LY +RF PY+V V+AG+D + K V D Sbjct: 67 LQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMDL 126 Query: 565 IG-HCARHNFRAGGSAAAQL----QPLLEQSNWLKEYAEC 669 IG C ++F G+ Q+ + L E++ KE EC Sbjct: 127 IGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFEC 166 >UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Aconoidasida|Rep: Proteasome subunit beta type - Theileria annulata Length = 220 Score = 56.4 bits (130), Expect = 9e-07 Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%) Frame = +1 Query: 397 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG-H 573 ++ MY+ +K M+ ++ M+ +MLY +RF P++V +V+AGLD+D + +D +G Sbjct: 86 KVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDTDSSPYITCFDLVGAP 145 Query: 574 CARHNFRAGGSAAAQLQPLLE 636 C +F G+ + QL + E Sbjct: 146 CTPTDFVVAGTCSEQLYGVCE 166 >UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfurococcales|Rep: Proteasome beta subunit - Hyperthermus butylicus (strain DSM 5456 / JCM 9403) Length = 204 Score = 55.6 bits (128), Expect = 2e-06 Identities = 25/86 (29%), Positives = 51/86 (59%) Frame = +1 Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558 +++L+A ++ Y + ++ AVA++L+T+LY +++P+ ++ GL++DG +Y Sbjct: 64 SKILRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKLYVM 123 Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636 DP+G ++ A GS A +LE Sbjct: 124 DPLGSLIEDDYAAIGSGAPIAIGILE 149 >UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10; Euryarchaeota|Rep: Proteasome subunit beta precursor - Archaeoglobus fulgidus Length = 213 Score = 54.4 bits (125), Expect = 4e-06 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 R+++ +YE + T A+A + S +L R+FPY V ++ G+DS+GK +YS D Sbjct: 68 RIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSID 126 Query: 562 PIGHCARH-NFRAGGSAAAQLQPLLE 636 PIG + A GS + +LE Sbjct: 127 PIGGAIEEKDIVATGSGSLTAYGVLE 152 >UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Giardia intestinalis|Rep: Proteasome subunit beta type-3 - Giardia lamblia (Giardia intestinalis) Length = 207 Score = 54.4 bits (125), Expect = 4e-06 Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 2/87 (2%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 R ++ + +Y + ++ + A A+M+S+ LY RF PY++S ++AG ++DGK + + D Sbjct: 67 RQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMD 126 Query: 562 PIGHCARH--NFRAGGSAAAQLQPLLE 636 IG C NF+ G+A+ L L E Sbjct: 127 TIG-CLDDCTNFQIAGTASDFLLGLCE 152 >UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome - Pyrocystis lunula (Dinoflagellate) Length = 214 Score = 53.6 bits (123), Expect = 6e-06 Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 +LL R++++ ++M V ++S++LY KRF PY+ V+AGLD D + ++D Sbjct: 67 QLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDKDHNPFLCAFD 126 Query: 562 PIGHCAR-HNFRAGGSAAAQLQPLLEQSNW 648 IG ++ +F G+++ QL + E S W Sbjct: 127 FIGAMSKAQDFVVSGTSSEQLFGVCE-SFW 155 Score = 35.5 bits (78), Expect = 1.8 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +3 Query: 207 NGGSIVAIAGDDYAVIGADTRLST-GFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377 NG +IVA+AGD I +DTR ++K F+L++ T +G G D T+ Sbjct: 8 NGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQTM 65 >UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cryptosporidium|Rep: Possible proteasome component - Cryptosporidium parvum Iowa II Length = 204 Score = 51.2 bits (117), Expect = 3e-05 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 9/112 (8%) Frame = +1 Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558 T L++ + +Y + + A++ M +++LY KRF PY+V ++AGLD++ + Y Sbjct: 64 TNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFIAGY 123 Query: 559 DPIGHCA-RHNFRAGGSAAAQL--------QPLLEQSNWLKEYAECNRSSFD 687 D IG + F G+A QL +P LE ++ ++C S D Sbjct: 124 DLIGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGID 175 >UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain; n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA SUBUNIT, theta chain - Encephalitozoon cuniculi Length = 205 Score = 51.2 bits (117), Expect = 3e-05 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 R ++ ++ EH + M ++ M+S +LY KR PY + ++AGL SDGK + D Sbjct: 66 RKIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTSDGKPYISGMD 125 Query: 562 PIGHCAR-HNFRAGGSAAAQLQPLLE 636 IG A +F A G+A L + E Sbjct: 126 CIGSIASPGDFVAVGTADKNLMGICE 151 >UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2; Euryarchaeota|Rep: Protease subunit of the proteasome - Methanopyrus kandleri Length = 210 Score = 50.4 bits (115), Expect = 6e-05 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 2/86 (2%) Frame = +1 Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLY--YKRFFPYYVSNVLAGLDSDGKGCVYSY 558 L++A ++YE HN+ ++ A+A M+S +L+ K F PY V ++ G + D +Y+ Sbjct: 68 LMRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDDDP-ALYNL 126 Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636 DP G ++ A GS + +LE Sbjct: 127 DPSGSIIEEDYTATGSGSPTAYGVLE 152 >UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermoproteaceae|Rep: Proteasome, beta subunit - Pyrobaculum aerophilum Length = 203 Score = 49.6 bits (113), Expect = 1e-04 Identities = 21/77 (27%), Positives = 45/77 (58%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 ++L+ + YE E + +T ++A++LS +++ +RF P++ ++ G+D +G + D Sbjct: 65 KILKLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGIDEEGPHLIV-MD 123 Query: 562 PIGHCARHNFRAGGSAA 612 P+G N+ A G+ A Sbjct: 124 PLGSLIEDNYAALGTGA 140 >UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus solfataricus Length = 196 Score = 48.8 bits (111), Expect = 2e-04 Identities = 25/78 (32%), Positives = 40/78 (51%) Frame = +1 Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558 TR++ ++ YE K ++ A A++LS +LY + P+ + G+D G +Y Sbjct: 60 TRIMNVEIKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQ-LYVL 118 Query: 559 DPIGHCARHNFRAGGSAA 612 DPIG N+ A GS A Sbjct: 119 DPIGSLIEDNYAAVGSGA 136 >UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; Eukaryota|Rep: Proteasome subunit beta type-3 - Homo sapiens (Human) Length = 205 Score = 47.6 bits (108), Expect = 4e-04 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 2/89 (2%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 564 L+ R+ +YE + + + + M++ +LY KRF PYY V+AGLD K + S D Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126 Query: 565 IG-HCARHNFRAGGSAAAQLQPLLEQSNW 648 IG +F G+ A Q+ + E S W Sbjct: 127 IGCPMVTDDFVVSGTCAEQMYGMCE-SLW 154 Score = 37.5 bits (83), Expect = 0.45 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = +3 Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377 NGG+++A+ G + I AD R + T D +K+F + + +G G D T+ Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 63 >UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Eukaryota|Rep: Proteasome subunit beta type - Plasmodium vivax Length = 218 Score = 46.8 bits (106), Expect = 7e-04 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 13/104 (12%) Frame = +1 Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAG------LDSDGKG- 543 LL+ R+ +YE M A MLS++LY RF PY+V+ ++ G LD +GK Sbjct: 68 LLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDDEGKKV 127 Query: 544 CVY-----SYDPIG-HCARHNFRAGGSAAAQLQPLLEQSNWLKE 657 C + +YD IG C +F G + QL + E S ++K+ Sbjct: 128 CSFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCE-SLYIKD 170 >UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta subunit - Entamoeba histolytica HM-1:IMSS Length = 205 Score = 46.4 bits (105), Expect = 0.001 Identities = 20/34 (58%), Positives = 25/34 (73%) Frame = +1 Query: 469 MLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 570 MLY KRF PYY+S ++AG+D +G V SYD IG Sbjct: 96 MLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYIG 129 Score = 35.1 bits (77), Expect = 2.4 Identities = 15/57 (26%), Positives = 30/57 (52%) Frame = +3 Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377 +GG++V +AG I AD R + + + K+F++++ + G G + D T+ Sbjct: 9 SGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTM 65 >UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; Thermococcaceae|Rep: PsmB proteasome, subunit beta - Pyrococcus abyssi Length = 197 Score = 46.0 bits (104), Expect = 0.001 Identities = 25/86 (29%), Positives = 45/86 (52%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 R+L+A + Y+ + MTT A+A +LS +L ++FPY V ++ G + + + D Sbjct: 63 RILEAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTIANLD 120 Query: 562 PIGHCARHNFRAGGSAAAQLQPLLEQ 639 P+G ++ A GS +LE+ Sbjct: 121 PLGGLIFDDYTATGSGTPFAIAILEE 146 >UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobacteriaceae|Rep: Proteasome, subunit alpha - Halobacterium salinarium (Halobacterium halobium) Length = 255 Score = 44.8 bits (101), Expect = 0.003 Identities = 30/86 (34%), Positives = 42/86 (48%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 R L+A +YE + M+ A++ M S +L FF V +L G+D DG G V+S D Sbjct: 118 RSLRAEANLYEARRGEYMSIDALSTMASNLLRGGPFFR--VVPILGGVDDDG-GHVFSLD 174 Query: 562 PIGHCARHNFRAGGSAAAQLQPLLEQ 639 P G + A GS +LEQ Sbjct: 175 PAGSSMSDTYTAQGSGMPYALGVLEQ 200 >UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum pernix|Rep: Proteasome beta subunit - Aeropyrum pernix Length = 219 Score = 44.4 bits (100), Expect = 0.004 Identities = 23/85 (27%), Positives = 44/85 (51%) Frame = +1 Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 564 +L+ +++YE + + VA +LS +L+ +FFPY V ++ G D+ + +Y+ D Sbjct: 83 VLREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYDTQPR--LYTLDL 140 Query: 565 IGHCARHNFRAGGSAAAQLQPLLEQ 639 G + A GS + +LE+ Sbjct: 141 FGSITEDKYTATGSGSPIAYGVLEE 165 Score = 35.1 bits (77), Expect = 2.4 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = +3 Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377 +G + V + D+ ++ AD R + GF I +R KK+ LS + +G D L Sbjct: 24 SGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQIL 80 >UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; Viridiplantae|Rep: Proteasome subunit beta type-3 - Oryza sativa subsp. japonica (Rice) Length = 204 Score = 44.4 bits (100), Expect = 0.004 Identities = 20/58 (34%), Positives = 32/58 (55%) Frame = +1 Query: 397 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 570 R ++Y+ + M A ++S +LY KRF PY+ V+AGL D + + + D IG Sbjct: 70 RHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFICTMDCIG 127 Score = 37.1 bits (82), Expect = 0.60 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = +3 Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377 NG ++VA+ G + I +D RL D +++FK+ + +G +G D TL Sbjct: 7 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTL 63 >UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanobrevibacter smithii ATCC 35061|Rep: Proteasome, beta subunit - Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) Length = 204 Score = 43.6 bits (98), Expect = 0.007 Identities = 24/85 (28%), Positives = 44/85 (51%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 ++++A + +Y+ +N ++ A A + + +L R P YV +L G+D D K +YS D Sbjct: 65 KIIEAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMDGD-KPSLYSLD 120 Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636 P G + + GS + +LE Sbjct: 121 PAGGMIEDTYISTGSGSIVAYGVLE 145 >UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bilateria|Rep: Proteasome subunit beta type-3 - Caenorhabditis elegans Length = 204 Score = 43.6 bits (98), Expect = 0.007 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = +3 Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377 GG++VA+AGD+ I +D R+ + DQKK+ K+++ +G G D T+ Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTV 63 Score = 42.3 bits (95), Expect = 0.016 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = +1 Query: 397 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG-H 573 R +YE N+++ +++M+S + Y RF Y+ ++AGLD K + D IG Sbjct: 70 RKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCV 129 Query: 574 CARHNFRAGGSAAAQLQPLLE 636 A +F A G+ L + E Sbjct: 130 SAPRDFVAVGTGQEYLLGVCE 150 >UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guillardia theta|Rep: Proteasome subunit beta type - Guillardia theta (Cryptomonas phi) Length = 200 Score = 43.2 bits (97), Expect = 0.009 Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +1 Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 564 +L+ + + + K M + ++ST+LY KRF PY + ++AG +GK + + D Sbjct: 63 ILEYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTENGKPFLGTVDC 122 Query: 565 IGHCAR-HNFRAGGSAAAQLQPLLE 636 IG + N+ G+ + PL++ Sbjct: 123 IGAISYISNYACIGNLCENIFPLIQ 147 >UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5; Thermoproteaceae|Rep: Proteasome beta subunit - Pyrobaculum aerophilum Length = 202 Score = 43.2 bits (97), Expect = 0.009 Identities = 21/83 (25%), Positives = 41/83 (49%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567 L R Y+ E+ + + A+ +S +L+Y R + Y V +++ G+D + +Y D + Sbjct: 60 LTLRAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMVDWL 119 Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636 G + + A GS + + LE Sbjct: 120 GTVTKEKYIATGSGSPYAKGALE 142 >UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4; Thermoplasmatales|Rep: Proteasome subunit beta precursor - Thermoplasma acidophilum Length = 211 Score = 42.7 bits (96), Expect = 0.012 Identities = 24/85 (28%), Positives = 44/85 (51%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 R ++A +++Y + +M AVA +LS ML ++ PY V ++ G+D+ V+S D Sbjct: 65 RYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPH--VFSID 122 Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636 G + + GS + + +LE Sbjct: 123 AAGGSVEDIYASTGSGSPFVYGVLE 147 >UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4; Thermococcaceae|Rep: Proteasome subunit beta precursor - Pyrococcus abyssi Length = 207 Score = 42.7 bits (96), Expect = 0.012 Identities = 25/75 (33%), Positives = 38/75 (50%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 RLL+A ++Y + K M+ A+A +L+ ML R PY ++ G D K +YS D Sbjct: 67 RLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDE--KPRLYSVD 124 Query: 562 PIGHCARHNFRAGGS 606 +G + A GS Sbjct: 125 MMGGITEDKYVAAGS 139 >UniRef50_Q6BG89 Cluster: Proteasome subunit beta type; n=3; Paramecium tetraurelia|Rep: Proteasome subunit beta type - Paramecium tetraurelia Length = 236 Score = 41.1 bits (92), Expect = 0.037 Identities = 19/67 (28%), Positives = 38/67 (56%) Frame = +3 Query: 165 VPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLG 344 + G +QH P GGS++A+ + ++G DT S G ++ KK+ ++S++T+ Sbjct: 7 ISGEQQHTTSPVV-TGGSVIALVYNGGVIVGTDTLCSYGSMAAFKNVKKIAQISKNTIYA 65 Query: 345 ATGCWCD 365 ++G + D Sbjct: 66 SSGEFSD 72 >UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 - Homo sapiens (Human) Length = 204 Score = 41.1 bits (92), Expect = 0.037 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 564 L+ ++ +YE + + + M++ LY K F PYY V+AGLD K S D Sbjct: 67 LKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPFSCSLDL 126 Query: 565 IGH-CARHNFRAGGSAAAQLQPLLEQSNW 648 IG +F GS A Q+ + E S W Sbjct: 127 IGFPMVTDDFVVNGSYAEQMYGMCE-SLW 154 >UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; Halorubrum|Rep: Proteasome endopeptidase complex - Halorubrum lacusprofundi ATCC 49239 Length = 243 Score = 41.1 bits (92), Expect = 0.037 Identities = 24/84 (28%), Positives = 39/84 (46%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567 L+A +YE K M+ A++ + +L F Y V +L G+D +G +YS D + Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGSH-IYSIDAL 164 Query: 568 GHCARHNFRAGGSAAAQLQPLLEQ 639 G + GS + +LEQ Sbjct: 165 GGTTEEEYTVTGSGSQYALGVLEQ 188 >UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9; Euryarchaeota|Rep: Proteasome subunit beta precursor - Methanococcus jannaschii Length = 224 Score = 41.1 bits (92), Expect = 0.037 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 RLL A ++Y+ +++ A A +LS +L+ R FP+ ++ G D ++S D Sbjct: 63 RLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLD 122 Query: 562 PIGHC-ARHNFRAGGSAAAQLQPLLE 636 P+G F A GS + +LE Sbjct: 123 PLGGMNEEKTFTATGSGSPIAYGVLE 148 >UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Trypanosomatidae|Rep: Proteasome subunit beta type-3 - Trypanosoma brucei brucei Length = 205 Score = 40.3 bits (90), Expect = 0.064 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = +1 Query: 397 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDPIG- 570 R +MY+ + + A A ++S+MLY RF P++V V+ +D G+ + + D IG Sbjct: 70 RTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCATDLIGA 129 Query: 571 HCARHNFRAGGSAAAQLQPLLE 636 C ++ G+ A L + E Sbjct: 130 PCEPEDYVCAGTCAESLHGMCE 151 >UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=3; Piroplasmida|Rep: Proteasome beta 2 subunit, putative - Babesia bovis Length = 218 Score = 39.5 bits (88), Expect = 0.11 Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Frame = +1 Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYS 555 +++++A + ++++++K ++T A A + L Y R PY V ++AG+D DG ++ Sbjct: 59 SKMIKATLDYHKYKNSKELSTNAAAHFVRLELAEYLRQSPYQVDMLIAGIDQDGPK-LFW 117 Query: 556 YDPIGHCARHNFRAGGSAAAQLQPLLEQ 639 D + C + + G L+ LL++ Sbjct: 118 IDYLASCTQADTAVHGYGGFLLRGLLDK 145 >UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome endopeptidase complex - Candidatus Nitrosopumilus maritimus SCM1 Length = 198 Score = 39.1 bits (87), Expect = 0.15 Identities = 21/83 (25%), Positives = 42/83 (50%) Frame = +1 Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567 + A ++ + E + + VA+M+S M+Y +R+FP ++ G+ K +Y+ DP+ Sbjct: 66 IAALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPL 123 Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636 G + A G+ A +L+ Sbjct: 124 GSVLPDEYAAVGTGAEMALGVLD 146 >UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2; Ostreococcus|Rep: Proteasome subunit beta type - Ostreococcus tauri Length = 265 Score = 38.7 bits (86), Expect = 0.20 Identities = 23/70 (32%), Positives = 35/70 (50%) Frame = +3 Query: 174 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353 A HR P A +I+A+ D V+GAD+R STG + R K+ + E+ + +G Sbjct: 37 ATTHRAPPRARAQTTIMAVKYADGVVLGADSRTSTGTYVANRASDKITPICENVWMCRSG 96 Query: 354 CWCDTLTLXA 383 DT + A Sbjct: 97 SAADTQNVAA 106 >UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit; n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha and beta subunit - Cenarchaeum symbiosum Length = 193 Score = 38.7 bits (86), Expect = 0.20 Identities = 19/64 (29%), Positives = 35/64 (54%) Frame = +1 Query: 445 AVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQ 624 +VA+M+S M+Y +RFFP ++ G+ G+ +Y+ D +G + A G+ A Sbjct: 81 SVAKMMSNMMYERRFFPLLTQVIVGGV--VGEPAIYTLDSLGSVLPDEYAAVGTGAEMAL 138 Query: 625 PLLE 636 +L+ Sbjct: 139 GVLD 142 >UniRef50_A0RWA6 Cluster: 20S proteasome, alpha and beta subunit; n=4; Thermoprotei|Rep: 20S proteasome, alpha and beta subunit - Cenarchaeum symbiosum Length = 245 Score = 38.3 bits (85), Expect = 0.26 Identities = 21/84 (25%), Positives = 37/84 (44%) Frame = +1 Query: 391 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 570 Q+ MY+ +A Y P+ V+ ++ G+D GKG ++ DP G Sbjct: 96 QSNRMMYDESVEVEAVAKHLADQCQQFTQYAGVRPFGVALIIGGVDDGGKGQLFLTDPSG 155 Query: 571 HCARHNFRAGGSAAAQLQPLLEQS 642 ++ A G+ + Q+ LE+S Sbjct: 156 TYISYDAIAIGAGSEQVTEFLEKS 179 >UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar to proteasome subunit RC10-II - Ornithorhynchus anatinus Length = 181 Score = 37.9 bits (84), Expect = 0.34 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = +3 Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLXAS 386 NGG+++A+ G + I AD R + T D +K+F + + +G G D T+ Sbjct: 31 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVPPR 90 Query: 387 S 389 S Sbjct: 91 S 91 >UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryptosporidium|Rep: Proteasome subunit beta type - Cryptosporidium parvum Iowa II Length = 279 Score = 37.9 bits (84), Expect = 0.34 Identities = 18/52 (34%), Positives = 30/52 (57%) Frame = +3 Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCD 365 G +IV +A +D V+GADTR + G + +D +K+ +LS++ G D Sbjct: 41 GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAGAGTAAD 92 >UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; Staphylothermus marinus F1|Rep: 20S proteasome, A and B subunits - Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) Length = 213 Score = 37.9 bits (84), Expect = 0.34 Identities = 26/95 (27%), Positives = 42/95 (44%) Frame = +1 Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561 R L+ + YE + + + +A++LS +LY + P V+ G D G +Y D Sbjct: 74 RALRMEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQ-IYVLD 132 Query: 562 PIGHCARHNFRAGGSAAAQLQPLLEQSNWLKEYAE 666 P+G + A GS ++E KEY E Sbjct: 133 PVGSLIEDKYVALGSGGPIALGIIE-----KEYRE 162 >UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2; Ostreococcus|Rep: Proteasome subunit beta type - Ostreococcus lucimarinus CCE9901 Length = 246 Score = 37.1 bits (82), Expect = 0.60 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +3 Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377 G +IVA V+GAD+R+STG + R K+ L++ T++ +G DT L Sbjct: 17 GTTIVACEYAGGVVLGADSRVSTGIYVSNRASDKMCALNDRTIMCRSGSAADTEAL 72 >UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Encephalitozoon cuniculi|Rep: Proteasome subunit beta type - Encephalitozoon cuniculi Length = 203 Score = 36.3 bits (80), Expect = 1.0 Identities = 19/53 (35%), Positives = 31/53 (58%) Frame = +3 Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDT 368 G +I+AI DD +IGAD+R S G + +R KL ++++ + +G DT Sbjct: 10 GTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADT 62 >UniRef50_Q5DAM2 Cluster: Proteasome subunit beta type; n=1; Schistosoma japonicum|Rep: Proteasome subunit beta type - Schistosoma japonicum (Blood fluke) Length = 248 Score = 35.9 bits (79), Expect = 1.4 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +3 Query: 177 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353 K H P G S++ I D V+ AD +S G D +++FK++ESTV+ +G Sbjct: 20 KHHTMTPIC-TGTSVIGIKYKDGVVLAADLLVSYGSLAKYMDFERMFKVNESTVMCCSG 77 >UniRef50_Q7XY60 Cluster: Proteasome chain protein; n=1; Griffithsia japonica|Rep: Proteasome chain protein - Griffithsia japonica (Red alga) Length = 187 Score = 35.5 bits (78), Expect = 1.8 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +3 Query: 213 GSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353 GSI+A+ G DY +I AD + + D K+ +L E + A G Sbjct: 3 GSIIALQGADYVLIAADVSCARSIVVMKDDMDKIRQLDEGKLFAAAG 49 >UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lamblia ATCC 50803|Rep: GLP_81_66910_67563 - Giardia lamblia ATCC 50803 Length = 217 Score = 35.1 bits (77), Expect = 2.4 Identities = 16/48 (33%), Positives = 30/48 (62%) Frame = +3 Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353 GG++VA+A D ++ ADT L+ G + T + +++ + T++G TG Sbjct: 7 GGTVVAVAHKDGVLMAADTVLNYGSTRRTDNYERIIPVGTHTLIGFTG 54 >UniRef50_A5B031 Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape) Length = 108 Score = 34.7 bits (76), Expect = 3.2 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +3 Query: 177 KQHRFEPYADNGGSIVAIAGDDYAVIGAD 263 +Q + Y +NGGS VAIAG DY VI A+ Sbjct: 38 QQANWSSYNNNGGSCVAIAGADYCVITAE 66 >UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Oligohymenophorea|Rep: Proteasome subunit beta type - Tetrahymena thermophila SB210 Length = 227 Score = 34.7 bits (76), Expect = 3.2 Identities = 21/56 (37%), Positives = 30/56 (53%) Frame = +3 Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377 G SI+A+ D ++GAD+R ++G I R Q K+ L E +G DT TL Sbjct: 25 GTSIMALVYDGGVLVGADSRTTSGSYIADRAQDKVDYLHERIYCLRSGSAADTQTL 80 >UniRef50_Q60KD2 Cluster: Putative uncharacterized protein CBG24113; n=2; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG24113 - Caenorhabditis briggsae Length = 388 Score = 33.9 bits (74), Expect = 5.6 Identities = 16/55 (29%), Positives = 36/55 (65%) Frame = -1 Query: 293 IYGKSSAETSVCSDNGIIIAGDGYNTTSVVRVGLETMLFRTRHSIFRKVLVNAQH 129 +YG+S+ + S GI++ D Y+T+ VVR E ++ +++ ++ +K+L++ Q+ Sbjct: 283 LYGESAIDDSTIE--GILLVADMYDTSIVVRKCEEFLMEKSKKNLKKKLLLSTQY 335 >UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2; Theileria|Rep: Putative uncharacterized protein - Theileria annulata Length = 204 Score = 33.9 bits (74), Expect = 5.6 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = +1 Query: 400 MQMYEHE--HNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGC 546 ++ Y HE KS T P+ S + ++ P Y+SN++A +SD KGC Sbjct: 40 IKFYNHETKERKSKTKPSF-NFGSLNIRFQTKLPEYLSNIIAYAESDNKGC 89 >UniRef50_A3V8G4 Cluster: Putative glycosyltransferase; n=3; Rhodobacterales|Rep: Putative glycosyltransferase - Loktanella vestfoldensis SKA53 Length = 225 Score = 33.1 bits (72), Expect = 9.7 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = +1 Query: 526 DSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQ 624 DS CVY D G+ ARHN R G S AQ++ Sbjct: 147 DSYDHACVYLRDIAGYGARHNVRPGVSGLAQVE 179 >UniRef50_Q5KHQ5 Cluster: Expressed protein; n=6; Tremellomycetes|Rep: Expressed protein - Cryptococcus neoformans (Filobasidiella neoformans) Length = 580 Score = 33.1 bits (72), Expect = 9.7 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 3/93 (3%) Frame = -1 Query: 683 KELLLHSAYSLSQFDCSRSGCSCAAAEPPARKLWRAQC---PIGS*LYTHPLPSLSKPAN 513 KE+ S +Q D +R G + A + P+R WRA P+ P SL+ N Sbjct: 362 KEIPYELPSSATQLDFARCGKAYARSSEPSRSSWRAHLDHQPLLQKTIIQPCSSLNTEEN 421 Query: 512 TLDT*YGKNRL*YNIVESICATAGVVIDLLCSC 414 D K R N+ E+ C+ G+ + + C Sbjct: 422 QTD----KYRKTSNMTETSCSKLGIELFVGVPC 450 >UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precursor; n=14; Magnoliophyta|Rep: Proteasome subunit beta type-6 precursor - Arabidopsis thaliana (Mouse-ear cress) Length = 233 Score = 33.1 bits (72), Expect = 9.7 Identities = 15/53 (28%), Positives = 30/53 (56%) Frame = +3 Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDT 368 G +I+ + + V+GAD+R STG + R K+ +L+++ + +G D+ Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADS 64 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 831,889,523 Number of Sequences: 1657284 Number of extensions: 16841719 Number of successful extensions: 47874 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 45576 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 47856 length of database: 575,637,011 effective HSP length: 100 effective length of database: 409,908,611 effective search space used: 79932179145 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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