Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D11
(887 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 126 1e-27
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 125 1e-27
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 122 2e-26
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 109 1e-22
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 105 2e-21
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 103 5e-21
UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 102 1e-20
UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 98 3e-19
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 94 5e-18
UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 90 6e-17
UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 90 8e-17
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 89 2e-16
UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 87 4e-16
UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 83 7e-15
UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 82 2e-14
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 81 5e-14
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 80 6e-14
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 79 1e-13
UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plas... 79 2e-13
UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 78 3e-13
UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 77 5e-13
UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 76 1e-12
UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S protea... 73 1e-11
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 73 1e-11
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 67 5e-10
UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7; ... 66 1e-09
UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 64 3e-09
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 59 2e-07
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 58 2e-07
UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 58 3e-07
UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 58 4e-07
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 57 7e-07
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 56 9e-07
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 56 2e-06
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 54 4e-06
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 54 4e-06
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 54 6e-06
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 51 3e-05
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 51 3e-05
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 50 6e-05
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 50 1e-04
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 49 2e-04
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 48 4e-04
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 47 7e-04
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 46 0.001
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 46 0.001
UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 45 0.003
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 44 0.004
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 44 0.004
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 44 0.007
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 44 0.007
UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 43 0.009
UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5; Thermopro... 43 0.009
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 43 0.012
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 43 0.012
UniRef50_Q6BG89 Cluster: Proteasome subunit beta type; n=3; Para... 41 0.037
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 41 0.037
UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 41 0.037
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 41 0.037
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 40 0.064
UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=... 40 0.11
UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 39 0.15
UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2; Ostr... 39 0.20
UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 39 0.20
UniRef50_A0RWA6 Cluster: 20S proteasome, alpha and beta subunit;... 38 0.26
UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 38 0.34
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 38 0.34
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 38 0.34
UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2; Ostr... 37 0.60
UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Ence... 36 1.0
UniRef50_Q5DAM2 Cluster: Proteasome subunit beta type; n=1; Schi... 36 1.4
UniRef50_Q7XY60 Cluster: Proteasome chain protein; n=1; Griffith... 36 1.8
UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lambli... 35 2.4
UniRef50_A5B031 Cluster: Putative uncharacterized protein; n=1; ... 35 3.2
UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Olig... 35 3.2
UniRef50_Q60KD2 Cluster: Putative uncharacterized protein CBG241... 34 5.6
UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2; ... 34 5.6
UniRef50_A3V8G4 Cluster: Putative glycosyltransferase; n=3; Rhod... 33 9.7
UniRef50_Q5KHQ5 Cluster: Expressed protein; n=6; Tremellomycetes... 33 9.7
UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precurso... 33 9.7
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 126 bits (303), Expect = 1e-27
Identities = 54/86 (62%), Positives = 69/86 (80%)
Frame = +1
Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558
T ++ RMQ YEH H ++MTT AVAQMLS +Y +RFFPYYVSN+LAG+D++GKG VYSY
Sbjct: 85 TGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSY 144
Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636
DPIGHC + +RAGG+A LQP+L+
Sbjct: 145 DPIGHCEKATYRAGGTAGTLLQPVLD 170
Score = 120 bits (290), Expect = 4e-26
Identities = 60/104 (57%), Positives = 73/104 (70%)
Frame = +3
Query: 144 ENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 323
E FP+Y VPG K F PY NGGSIVAIAGDD+AVI ADTRLS+G++I++R Q KLFKL
Sbjct: 7 EQFPDYQVPGMKHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKL 66
Query: 324 SESTVLGATGCWCDTLTLXASSTSEDADVRTRA*QIYDHSGSRT 455
S TVLG+ GCW DTL+L S ++ R Q Y+H+ RT
Sbjct: 67 SPQTVLGSAGCWADTLSLTGS-------IKVRM-QSYEHTHLRT 102
Score = 50.0 bits (114), Expect = 8e-05
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
D FISAAERDIYTGDS+ I IIT GI+ LR+D
Sbjct: 199 DTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 125 bits (302), Expect = 1e-27
Identities = 52/86 (60%), Positives = 73/86 (84%)
Frame = +1
Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558
T++++AR++MY+H +NK+MTT A+A MLST+LY +RFFPYYV N++ GLD +GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636
DP+G R +F+AGGSA+A LQPLL+
Sbjct: 153 DPVGSYQRDSFKAGGSASAMLQPLLD 178
Score = 86.6 bits (205), Expect = 7e-16
Identities = 39/69 (56%), Positives = 52/69 (75%)
Frame = +3
Query: 171 GAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGAT 350
G Q RF PY NGG+I+AIAG+D+A++ +DTRLS GFSI+TRD K +KL++ TV+G +
Sbjct: 24 GPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCS 83
Query: 351 GCWCDTLTL 377
G D LTL
Sbjct: 84 GFHGDCLTL 92
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
DVFISAAERD+YTGD++ I I+T GI+EE LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
Score = 33.1 bits (72), Expect = 9.7
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 590 SALVVPLLHSCNRSSNNQIGLKNMQNVTEAPLTREKAL 703
SA++ PLL +NQ+G KNMQNV PL+ ++A+
Sbjct: 170 SAMLQPLL-------DNQVGFKNMQNVEHVPLSLDRAM 200
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 122 bits (293), Expect = 2e-26
Identities = 50/86 (58%), Positives = 72/86 (83%)
Frame = +1
Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558
T++++AR++MY+H +NKSMT+ A+A MLST+LY +RFFPYYV N++ GLD +G+G VYS+
Sbjct: 90 TKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSF 149
Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636
DP+G R ++AGGSA+A LQPLL+
Sbjct: 150 DPVGSYQRDTYKAGGSASAMLQPLLD 175
Score = 89.8 bits (213), Expect = 8e-17
Identities = 38/86 (44%), Positives = 60/86 (69%)
Frame = +3
Query: 120 SYKMLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTR 299
S + N +Y G +H+F PYA NGG+++A+AG+D+A++ +DTRLS G+SI++R
Sbjct: 4 SAQACGANGRMKDYHYTGPVEHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSR 63
Query: 300 DQKKLFKLSESTVLGATGCWCDTLTL 377
D K +KL+++TV+G +G D LTL
Sbjct: 64 DSPKCYKLTDTTVIGCSGFHGDCLTL 89
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
DVFISAAERD+YTGD++ I IIT GI+EE LRKD
Sbjct: 202 DVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238
Score = 36.7 bits (81), Expect = 0.79
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +2
Query: 569 DTVRA--ITSALVVPLLHSCNRSSNNQIGLKNMQNVTEAPLTREKAL 703
DT +A SA++ PLL +NQIG KNM+NV + PL++EKA+
Sbjct: 158 DTYKAGGSASAMLQPLL-------DNQIGFKNMENVEQVPLSQEKAV 197
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 109 bits (261), Expect = 1e-22
Identities = 46/83 (55%), Positives = 62/83 (74%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
L AR +Y+H+HNK M+ PA+AQ+LS LYYKRFFPYY NVL GLDS+GKGCV++YD +
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 131
Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636
G R + A G+ +A + P+L+
Sbjct: 132 GSYERTGYSAQGTGSALIMPVLD 154
Score = 62.9 bits (146), Expect = 1e-08
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +3
Query: 198 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353
Y +NGG+ VAIAG DY V+ ADTRLS G++I TRD K+ +L++ L ++G
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSG 60
Score = 47.2 bits (107), Expect = 6e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
DVF SA ERDIYTGD + I++I G + E +LRKD
Sbjct: 185 DVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 105 bits (251), Expect = 2e-21
Identities = 43/85 (50%), Positives = 62/85 (72%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRFFPYY NVL GLD +GKGCV++YD
Sbjct: 72 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 131
Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636
+G R + A GS + + P L+
Sbjct: 132 AVGSYERVGYGAQGSGSTLIMPFLD 156
Score = 75.4 bits (177), Expect = 2e-12
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +3
Query: 177 KQH-RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353
KQH + PY +NGG+ VAIAG DY VI ADTR+STG+SI +RD K+ KL++ VL ++G
Sbjct: 3 KQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSG 62
Query: 354 CWCDTLTL 377
D L
Sbjct: 63 FQADVKAL 70
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 720 VFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
VF SA ERDIYTGD + I+I+ A GI+ E +LRKD
Sbjct: 188 VFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 103 bits (248), Expect = 5e-21
Identities = 43/89 (48%), Positives = 62/89 (69%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
++ R++ YEH HNK+M ++A+M+ TMLY KRFFPYYV N+L G++ DG G VYS+DP+
Sbjct: 90 VKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSFDPV 149
Query: 568 GHCARHNFRAGGSAAAQLQPLLEQSNWLK 654
G R RA G+A + +QP L+ + K
Sbjct: 150 GSYEREACRAAGAAQSLIQPFLDNQVYFK 178
Score = 73.7 bits (173), Expect = 6e-12
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = +3
Query: 147 NFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLS 326
++ ++A + H F PY+DNGGSI+AIAG D+++I DTR S G+SI TR +K+++L+
Sbjct: 10 SYQDHAAGPVQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLT 69
Query: 327 ESTVLGATGCWCD 365
+ VL G D
Sbjct: 70 DKVVLATNGFAAD 82
>UniRef50_A6R393 Cluster: Proteasome component C5; n=5;
Ascomycota|Rep: Proteasome component C5 - Ajellomyces
capsulatus NAm1
Length = 266
Score = 102 bits (244), Expect = 1e-20
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
L A ++MY+++H K M+ A AQ L+T+LY KRFFPYYV +LAG+D DGKG +YSYDP+
Sbjct: 108 LDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDEDGKGALYSYDPV 167
Query: 568 GHCARHNFRAGGSAAAQLQPLLE-QSNWLKEY 660
G R RA G+AA+ + P L+ Q N+ +Y
Sbjct: 168 GSYEREYCRAAGAAASLIMPFLDNQVNFKNQY 199
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +3
Query: 171 GAKQHR-FEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLG 344
G KQH F PY DNGGS + IAG DYA++ DTR +G++I TR KLFK+ E G
Sbjct: 27 GPKQHHGFNPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDECG 85
Score = 39.9 bits (89), Expect = 0.085
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
D F SA ER I GD + +++IT GIQE L+KD
Sbjct: 230 DAFTSAVERHIEVGDGLQVMVITREGIQEIYHPLKKD 266
>UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core
eudicotyledons|Rep: Proteasome subunit RC5 like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 97.9 bits (233), Expect = 3e-19
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRFFPYY NVL GLD +GKGCV++YD
Sbjct: 1 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 60
Query: 562 PIGHCARHNFRAGG 603
+G R + A G
Sbjct: 61 AVGSYERVGYGAQG 74
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 93.9 bits (223), Expect = 5e-18
Identities = 39/83 (46%), Positives = 58/83 (69%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
++ +++Y +++NK + + A+ + MLY KRFFPYYV ++AGLD +GKG VYSYDP+
Sbjct: 93 IKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDEEGKGAVYSYDPV 152
Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636
G R RAGGSAA+ + P L+
Sbjct: 153 GSYEREFCRAGGSAASLVMPFLD 175
Score = 44.4 bits (100), Expect = 0.004
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +3
Query: 180 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 359
+HRF PY GDD+A++ DTR +TG+SI +R Q K+F + ++ ++ A G
Sbjct: 34 EHRFNPYG----------GDDFALLAGDTRNTTGYSINSRYQPKVFDVGDNILVTANGFS 83
Query: 360 CD 365
D
Sbjct: 84 AD 85
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
D F SA ER I+ GD + ILI+T G+++E F L++D
Sbjct: 202 DAFSSATERHIHVGDGLEILIVTKEGVRKEFFPLKRD 238
>UniRef50_P23724 Cluster: Proteasome component C5; n=23;
Fungi/Metazoa group|Rep: Proteasome component C5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 241
Score = 90.2 bits (214), Expect = 6e-17
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Frame = +1
Query: 400 MQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHC 576
++ Y +HN K ++ + A+ + +LY KRFFPYYV ++AGLD DGKG VYS+DP+G
Sbjct: 91 VKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSY 150
Query: 577 ARHNFRAGGSAAAQLQPLLE-QSNWLKEY 660
R RAGG+AA+ + P L+ Q N+ +Y
Sbjct: 151 EREQCRAGGAAASLIMPFLDNQVNFKNQY 179
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +3
Query: 180 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 359
+H+F PY DNGG+I+ IAG+D+AV+ DTR T +SI +R + K+F ++ V+ A G
Sbjct: 18 EHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFA 77
Query: 360 CD 365
D
Sbjct: 78 AD 79
Score = 41.9 bits (94), Expect = 0.021
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
D F SA ER I GD + ILI+T G+++E +EL++D
Sbjct: 205 DSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241
>UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 236
Score = 89.8 bits (213), Expect = 8e-17
Identities = 38/83 (45%), Positives = 57/83 (68%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
L++ ++ +E EH K M+TPA+AQ LS LYYKRFFPYY N++AG+D G+G +++YD +
Sbjct: 90 LKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEQGEGWIWTYDAV 149
Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636
G R + + GS + PLL+
Sbjct: 150 GSHERVKYSSQGSGNQLVIPLLD 172
Score = 70.5 bits (165), Expect = 5e-11
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +3
Query: 186 RFEPYADNGGSIVAIAGDDYAVIGADTRLST-GFSIYTRDQKKLFKLSESTVLGATGCWC 362
RFE Y DNGG+++A+AG DY VI DTR+S G+ I TR K+F+L++ VL +G
Sbjct: 22 RFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQA 81
Query: 363 DTLTL 377
DT+ L
Sbjct: 82 DTIAL 86
Score = 42.7 bits (96), Expect = 0.012
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
D SA ERDIYTGD I+++ +G+ EKFEL+ D
Sbjct: 200 DSITSAGERDIYTGDFADIVVVDKNGVHWEKFELKLD 236
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 88.6 bits (210), Expect = 2e-16
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
+ L A++++YE EHNK+ + A+AQ+LS +LY KRFFPYY +L+GLD GKG VY YD
Sbjct: 101 KTLLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDEQGKGVVYGYD 160
Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636
+G +H F A GS + + +L+
Sbjct: 161 AVGSFDQHKFVALGSGGSLITSILD 185
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/65 (46%), Positives = 40/65 (61%)
Frame = +3
Query: 171 GAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGAT 350
G +H F PY +NGGS VA+AGDD+ VI ADTRLS + I +R K +L+ +L +
Sbjct: 31 GKIEHSFNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACS 90
Query: 351 GCWCD 365
G D
Sbjct: 91 GMLAD 95
Score = 38.7 bits (86), Expect = 0.20
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
D SA+ERD++TGDS +++I + GI LR+D
Sbjct: 210 DSITSASERDVHTGDSAEVIVIDSSGISVSSLRLRED 246
>UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type-1 -
Caenorhabditis elegans
Length = 258
Score = 87.4 bits (207), Expect = 4e-16
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
++LQ+R+ Y ++ M+ A++LS LYY+RFFPYY +LAG+D GKG V+SYD
Sbjct: 109 KVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFSYD 168
Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636
PIG R + A G+A + P L+
Sbjct: 169 PIGCIERLGYSASGAAEPMIIPFLD 193
Score = 53.6 bits (123), Expect = 6e-06
Identities = 24/68 (35%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +3
Query: 177 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLS-TGFSIYTRDQKKLFKLSESTVLGATG 353
++ R+ PY+ GGS AI+G+++A++ +DTR++ +I TRD +K+ L+++ +L +G
Sbjct: 40 ERQRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSG 99
Query: 354 CWCDTLTL 377
+ D L L
Sbjct: 100 FYGDVLQL 107
>UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 215
Score = 83.4 bits (197), Expect = 7e-15
Identities = 36/83 (43%), Positives = 56/83 (67%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
L A + MY+++H K++ A AQ +STMLY KRFFPY + ++AG+D+DG+G +Y YDP
Sbjct: 77 LDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDADGQGAIYYYDPA 136
Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636
G + + A G A++ + P L+
Sbjct: 137 GCIEKRSHCAAGEASSLMLPFLD 159
Score = 56.0 bits (129), Expect = 1e-06
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = +3
Query: 174 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSES 332
AK+ RF PY NGG+ + ++G D+A++ DTR + G++I TR + K+F + ++
Sbjct: 2 AKETRFYPYTSNGGATLGVSGPDFAILAGDTRSTAGYNINTRYEPKVFTIQDA 54
Score = 37.1 bits (82), Expect = 0.60
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
D + A ER I GD + +L++T G+ E+ +L+KD
Sbjct: 179 DAYTGATERHIEVGDHLQMLVVTREGVSEQLVDLKKD 215
>UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type-1 -
Trypanosoma brucei brucei
Length = 258
Score = 82.2 bits (194), Expect = 2e-14
Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 382 RLLQARMQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558
++L+ R+Q Y++ + K +T A+A++ STMLY +RFFPYY N++ G+D G G YSY
Sbjct: 110 QMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCYSY 169
Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636
DP+G + GSA++ ++PLL+
Sbjct: 170 DPVGSTEPFRYGTCGSASSFVEPLLD 195
Score = 73.3 bits (172), Expect = 7e-12
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Frame = +3
Query: 171 GAKQH--RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTR-DQKKLFKLSESTVL 341
GAK H + PY DNGG+I AIAG +Y V+GADTRL+ F I+TR D KLFKL++ L
Sbjct: 37 GAKGHPQHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFL 96
Query: 342 GATGCWCDTLTL 377
++G D L L
Sbjct: 97 ASSGMQADRLQL 108
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
+ F AAERDI+TGD++ IITA G+ E FELRKD
Sbjct: 222 NAFTGAAERDIFTGDTVCFHIITADGVGTEMFELRKD 258
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 80.6 bits (190), Expect = 5e-14
Identities = 33/84 (39%), Positives = 57/84 (67%)
Frame = +1
Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 564
+L+ ++++Y + HN+ T A+AQ+LST+LY +RFFPYY N+L G+D GKG V YD
Sbjct: 73 VLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGKGVVCGYDA 132
Query: 565 IGHCARHNFRAGGSAAAQLQPLLE 636
+G+ + A G++++ + +L+
Sbjct: 133 VGNYNYEKYTAQGTSSSLVISVLD 156
Score = 72.1 bits (169), Expect = 2e-11
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +3
Query: 180 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 359
+ RF PY +NGG+++A ++YAVI ADTRLS + I+TR KLFKL++ +LG +G
Sbjct: 5 EERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGTSGMQ 64
Query: 360 CDTLTL 377
D L L
Sbjct: 65 ADMLAL 70
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 80.2 bits (189), Expect = 6e-14
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = +1
Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558
++ L AR+ MY++ + K A+A +LS LYYKRFFPYY N+LAG D G+G V +Y
Sbjct: 99 SKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDDKGEGLVINY 158
Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLEQ 639
D +G + GS A + P+ +Q
Sbjct: 159 DAVGSGDFKKYAVLGSGAQLITPVFDQ 185
Score = 61.3 bits (142), Expect = 3e-08
Identities = 26/68 (38%), Positives = 42/68 (61%)
Frame = +3
Query: 174 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353
AK++ F PY N G++ AIA D+ ++ D R+S G+SI +RD KL +L+++ L +G
Sbjct: 31 AKRNEFNPYVFNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSG 90
Query: 354 CWCDTLTL 377
+ D L
Sbjct: 91 MYADFAAL 98
Score = 37.5 bits (83), Expect = 0.45
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQE-EKFELRKD 827
D F SA ERDIYTGD + I+I+ E + F LRKD
Sbjct: 210 DCFESATERDIYTGDQLEIVILRKDKAPEYQLFPLRKD 247
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 79.4 bits (187), Expect = 1e-13
Identities = 40/99 (40%), Positives = 58/99 (58%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
+ LQ R+Q+YE ++ +T VA +LS LY +RFFPYY N+LAGLD + G VY YD
Sbjct: 93 KFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDENNHGVVYGYD 152
Query: 562 PIGHCARHNFRAGGSAAAQLQPLLEQSNWLKEYAECNRS 678
IG + + GS + +L+ N LK Y + N++
Sbjct: 153 AIGSYDQMTYGVQGSGQELVVAVLD--NQLKGYNKINKT 189
Score = 56.4 bits (130), Expect = 9e-07
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +3
Query: 177 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGC 356
K ++ PY DN G+++A+ ++ DTRLS G++I +RD KL +L++ VL G
Sbjct: 25 KSDQWSPYHDNSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQ 84
Query: 357 WCDTLTL 377
+ D + L
Sbjct: 85 YADFIAL 91
Score = 43.6 bits (98), Expect = 0.007
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
D F AAERDI+TGD++ ILIITA G + LRKD
Sbjct: 203 DCFSCAAERDIHTGDNVEILIITAAGTERIVKPLRKD 239
>UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium berghei
Length = 267
Score = 78.6 bits (185), Expect = 2e-13
Identities = 33/86 (38%), Positives = 56/86 (65%)
Frame = +1
Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558
+++LQ ++Q++ EH+ + +A++L LY +RFFPYY N+LAG+D +GKG +YSY
Sbjct: 120 SKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYSY 179
Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636
D IG + GS ++ + P+L+
Sbjct: 180 DAIGSYYQSTHACTGSGSSLILPILD 205
Score = 70.5 bits (165), Expect = 5e-11
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +3
Query: 126 KMLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQ 305
K NE E+A P R+ PY DNGG+++ + G++Y ++ DTRLS +SIYTR+
Sbjct: 14 KKTEENEAAIEHARPSK---RWNPYIDNGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNC 70
Query: 306 KKLFKLSESTVLGATGCWCDTLTL 377
K+ K+++ ++G++G D TL
Sbjct: 71 PKISKITDKCIIGSSGMQSDIKTL 94
Score = 36.3 bits (80), Expect = 1.0
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
D SA ERDIYTGD I II GI +L++D
Sbjct: 231 DAMTSATERDIYTGDKAEIYIIDNLGINTTLLDLKQD 267
>UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 226
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +1
Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558
T ++A ++ Y++E+ K M+T +VAQ+LS LY RFFPYY ++LAG++S GK Y+Y
Sbjct: 84 TDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNY 143
Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636
D +G + GS PLL+
Sbjct: 144 DAVGSFEERKYSCSGSGEELAYPLLD 169
Score = 56.8 bits (131), Expect = 7e-07
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 141 NENFPEYAVPGAK-QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLF 317
N+ F + V AK + ++ PY DN G+ V I G+D+ VI +DTR+S + I TR+ K++
Sbjct: 4 NKMFTQQPVREAKNKDQWSPYEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIY 63
Query: 318 KLSESTVLGATGCWCD 365
L+ V +G D
Sbjct: 64 PLTSKCVFTGSGMRAD 79
Score = 39.9 bits (89), Expect = 0.085
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
DV SA ERDI+TGD++ I+I+ ++GI++E + D
Sbjct: 190 DVMTSACERDIHTGDNVEIVILNSNGIRKEVHFMASD 226
>UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 254
Score = 77.4 bits (182), Expect = 5e-13
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Frame = +1
Query: 352 AAGVTH*PXTRLLQ-ARMQMYEH--EHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAG 522
AA H RLL+ +++ E+ + K + ++LS M+YY+R FP+Y S+++AG
Sbjct: 99 AASGMHADVQRLLKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAG 158
Query: 523 LDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLEQSNWLKEYAECNR 675
+DS+G+G VYSYD IG R + + G+ A + P+L+++ K AE R
Sbjct: 159 IDSEGRGAVYSYDVIGSTLRTRYGSAGTGNAMICPILDEAILSKNEAEITR 209
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/78 (42%), Positives = 50/78 (64%)
Frame = +3
Query: 144 ENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 323
+ PE + K F+PY DNGG+I+AIAG D+A+I DTRLS G++I +R+ +K+F +
Sbjct: 33 KKMPEVSNAPLKDPDFDPYIDNGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPV 92
Query: 324 SESTVLGATGCWCDTLTL 377
++ V A+G D L
Sbjct: 93 TDKIVYAASGMHADVQRL 110
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +3
Query: 723 FISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
F S AERDIYTGDS+ + I+A GIQE FELRKD
Sbjct: 220 FRSCAERDIYTGDSVVAMCISADGIQERTFELRKD 254
>UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 224
Score = 75.8 bits (178), Expect = 1e-12
Identities = 31/78 (39%), Positives = 53/78 (67%)
Frame = +1
Query: 409 YEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHN 588
YE++H M+ +VA+ +S LY KRFFPYY++ ++ G++S+GKG +Y YDP+G +
Sbjct: 86 YENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGINSEGKGKLYGYDPVGTIEDLH 145
Query: 589 FRAGGSAAAQLQPLLEQS 642
+ + GS ++ PLL+ +
Sbjct: 146 YDSNGSGSSLAAPLLDSA 163
Score = 64.9 bits (151), Expect = 3e-09
Identities = 27/59 (45%), Positives = 43/59 (72%)
Frame = +3
Query: 177 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353
K+ ++ PY +GG+ + I GDDY VIGADTRLS +SI +R + ++FK++ + ++ ATG
Sbjct: 9 KKGQWSPYEMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATG 67
Score = 37.9 bits (84), Expect = 0.34
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFEL 818
D S ERDIYTGD++ + + T G +E+F L
Sbjct: 188 DAICSVTERDIYTGDALQLCVFTKDGFAQEEFPL 221
>UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S
proteasome beta 6 subunit; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 20S proteasome
beta 6 subunit - Strongylocentrotus purpuratus
Length = 165
Score = 72.9 bits (171), Expect = 1e-11
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +3
Query: 141 NENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFK 320
+E P Y +Q RF PY NGG+I+A+AGDDYA+I +DTRLS GFSI+TRD K ++
Sbjct: 8 HETVPSYHP--VEQQRFNPYTFNGGTIMAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYR 65
Query: 321 L 323
L
Sbjct: 66 L 66
Score = 54.8 bits (126), Expect = 3e-06
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
DVFISAAERDIYTGD I + ++T G +EE+F LR+D
Sbjct: 129 DVFISAAERDIYTGDGIVLHVLTKDGCKEERFPLRRD 165
Score = 53.6 bits (123), Expect = 6e-06
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 7/48 (14%)
Frame = +1
Query: 535 GKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLE-------QSNWLKE 657
GKGCVYS+DP+G R +RA GS++A LQPLL+ Q W+KE
Sbjct: 69 GKGCVYSFDPVGSYERETYRAAGSSSALLQPLLDNQIGGKNQEGWVKE 116
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 72.5 bits (170), Expect = 1e-11
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +3
Query: 186 RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCD 365
R+ PY DNGG+++ + G DY ++ ADTRLS +SIYTR K+ KL++ ++G++G D
Sbjct: 30 RWNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSD 89
Query: 366 TLTL 377
TL
Sbjct: 90 IKTL 93
Score = 70.1 bits (164), Expect = 7e-11
Identities = 31/84 (36%), Positives = 51/84 (60%)
Frame = +1
Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 564
LL+ +++++ EH +A++L +LY +RFFPYY N+LAG+ +D KG +Y+YD
Sbjct: 96 LLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDSKGVLYNYDA 155
Query: 565 IGHCARHNFRAGGSAAAQLQPLLE 636
IG GS +A + P+L+
Sbjct: 156 IGSYCEATHSCVGSGSALILPILD 179
Score = 40.3 bits (90), Expect = 0.064
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
D SA ERDIYTGDS I II G+ EL++D
Sbjct: 205 DAITSATERDIYTGDSTEIYIIDQMGVNTTSLELKQD 241
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 67.3 bits (157), Expect = 5e-10
Identities = 37/92 (40%), Positives = 56/92 (60%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
R+++A M++YE + N S VA++LS +LY +R FPYY V+ GLD +G +YS D
Sbjct: 62 RIVEAEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSH-LYSLD 120
Query: 562 PIGHCARHNFRAGGSAAAQLQPLLEQSNWLKE 657
PIG ++ A GS QL + +SN+ K+
Sbjct: 121 PIGAIIEDDYVALGS-GTQLAISIVESNYKKD 151
>UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7;
n=1; Candida albicans|Rep: Putative uncharacterized
protein PRE7 - Candida albicans (Yeast)
Length = 127
Score = 66.1 bits (154), Expect = 1e-09
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = +3
Query: 180 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 359
+HRF PY+DNGG+++ IAG+D+AV+ DTR G+SI +R + K+ + + ++ A G
Sbjct: 22 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDDILMTANGFA 81
Query: 360 CDTLTL 377
D + L
Sbjct: 82 ADGVAL 87
>UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 290
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Frame = +1
Query: 403 QMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAR 582
++ ++E + S+ + A +LS +LY KRFFPYY VL+G + GK VYSYDPIG
Sbjct: 151 EIRQYEVDDSINIHSAANLLSKILYSKRFFPYYSFCVLSGFEK-GKPYVYSYDPIGSFGS 209
Query: 583 HNFRAGGSAAAQLQPLL----EQSNW 648
GS + +QPLL ++ NW
Sbjct: 210 VTCVCSGSGRSMIQPLLDSFIDKKNW 235
Score = 51.6 bits (118), Expect = 3e-05
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +3
Query: 180 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 359
+ RF+PY DN G+ + + D+ V+ DTR S+ I +R+ K+F++ + + G TG +
Sbjct: 80 KERFDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTG-TGFY 138
Query: 360 CDT 368
DT
Sbjct: 139 ADT 141
Score = 33.9 bits (74), Expect = 5.6
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 723 FISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
F SAAERD+ T D++ + ++ + + E F LR+D
Sbjct: 256 FNSAAERDVKTKDNLEVCVMRENQVMRETFPLRRD 290
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 58.8 bits (136), Expect = 2e-07
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
L+ + MYE N+ M+ A ++ST LY KRF PYY V+AGLD DGK + S D I
Sbjct: 66 LRFKHDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDKDGKPYITSMDLI 125
Query: 568 G 570
G
Sbjct: 126 G 126
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
R+++ +M++ E K T VA+ LS++LY +FFP+ V ++ G+D G+ +Y D
Sbjct: 62 RIVEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDPGGEPKLYVLD 121
Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636
P+G ++ A G+ A LLE
Sbjct: 122 PLGSIIEEDYVAAGTGATTAFGLLE 146
>UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome
subunit beta-type; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to proteasome subunit
beta-type - Strongylocentrotus purpuratus
Length = 104
Score = 58.0 bits (134), Expect = 3e-07
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +1
Query: 433 MTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGK 540
M T A+A MLST+LYY+RFFPYY N+LAGLD +G+
Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGE 36
Score = 54.8 bits (126), Expect = 3e-06
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
DVFISAAERDIYTGD I + ++T G +EE+F LR+D
Sbjct: 68 DVFISAAERDIYTGDGIVLHVLTKDGCKEERFPLRRD 104
>UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 239
Score = 57.6 bits (133), Expect = 4e-07
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +3
Query: 138 VNENFPEYAVPGAKQHR-FEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKL 314
+N N Y + +R F+PY +NGG ++AI G+ + V+ +DTR+S G+SI +R ++
Sbjct: 12 LNFNIKTYNLNFKSLNRNFDPYQNNGGLVLAITGNKFCVMASDTRISMGYSIPSRLNLRI 71
Query: 315 FKLSESTVLGATGCWCD 365
K+S +LG++G D
Sbjct: 72 LKISNLCLLGSSGMISD 88
Score = 50.4 bits (115), Expect = 6e-05
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +1
Query: 421 HNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAG 600
+N + + + S++LY +RFFP+Y N+L G++ GK Y+YD IG ++
Sbjct: 107 NNTELNLNGIVYLTSSLLYSRRFFPFYTFNILTGINELGKASNYTYDAIGSFDCNHASTV 166
Query: 601 GSAAAQLQPLLE 636
G+ + Q +++
Sbjct: 167 GNCQSSAQCIMD 178
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 56.8 bits (131), Expect = 7e-07
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 564
LQ R MYE N+++ + MLS +LY +RF PY+V V+AG+D + K V D
Sbjct: 67 LQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMDL 126
Query: 565 IG-HCARHNFRAGGSAAAQL----QPLLEQSNWLKEYAEC 669
IG C ++F G+ Q+ + L E++ KE EC
Sbjct: 127 IGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFEC 166
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 397 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG-H 573
++ MY+ +K M+ ++ M+ +MLY +RF P++V +V+AGLD+D + +D +G
Sbjct: 86 KVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDTDSSPYITCFDLVGAP 145
Query: 574 CARHNFRAGGSAAAQLQPLLE 636
C +F G+ + QL + E
Sbjct: 146 CTPTDFVVAGTCSEQLYGVCE 166
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 55.6 bits (128), Expect = 2e-06
Identities = 25/86 (29%), Positives = 51/86 (59%)
Frame = +1
Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558
+++L+A ++ Y + ++ AVA++L+T+LY +++P+ ++ GL++DG +Y
Sbjct: 64 SKILRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKLYVM 123
Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636
DP+G ++ A GS A +LE
Sbjct: 124 DPLGSLIEDDYAAIGSGAPIAIGILE 149
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 54.4 bits (125), Expect = 4e-06
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
R+++ +YE + T A+A + S +L R+FPY V ++ G+DS+GK +YS D
Sbjct: 68 RIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSID 126
Query: 562 PIGHCARH-NFRAGGSAAAQLQPLLE 636
PIG + A GS + +LE
Sbjct: 127 PIGGAIEEKDIVATGSGSLTAYGVLE 152
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 54.4 bits (125), Expect = 4e-06
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
R ++ + +Y + ++ + A A+M+S+ LY RF PY++S ++AG ++DGK + + D
Sbjct: 67 RQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMD 126
Query: 562 PIGHCARH--NFRAGGSAAAQLQPLLE 636
IG C NF+ G+A+ L L E
Sbjct: 127 TIG-CLDDCTNFQIAGTASDFLLGLCE 152
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 53.6 bits (123), Expect = 6e-06
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
+LL R++++ ++M V ++S++LY KRF PY+ V+AGLD D + ++D
Sbjct: 67 QLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDKDHNPFLCAFD 126
Query: 562 PIGHCAR-HNFRAGGSAAAQLQPLLEQSNW 648
IG ++ +F G+++ QL + E S W
Sbjct: 127 FIGAMSKAQDFVVSGTSSEQLFGVCE-SFW 155
Score = 35.5 bits (78), Expect = 1.8
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 207 NGGSIVAIAGDDYAVIGADTRLST-GFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377
NG +IVA+AGD I +DTR ++K F+L++ T +G G D T+
Sbjct: 8 NGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQTM 65
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 51.2 bits (117), Expect = 3e-05
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Frame = +1
Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558
T L++ + +Y + + A++ M +++LY KRF PY+V ++AGLD++ + Y
Sbjct: 64 TNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFIAGY 123
Query: 559 DPIGHCA-RHNFRAGGSAAAQL--------QPLLEQSNWLKEYAECNRSSFD 687
D IG + F G+A QL +P LE ++ ++C S D
Sbjct: 124 DLIGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGID 175
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
R ++ ++ EH + M ++ M+S +LY KR PY + ++AGL SDGK + D
Sbjct: 66 RKIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTSDGKPYISGMD 125
Query: 562 PIGHCAR-HNFRAGGSAAAQLQPLLE 636
IG A +F A G+A L + E
Sbjct: 126 CIGSIASPGDFVAVGTADKNLMGICE 151
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 50.4 bits (115), Expect = 6e-05
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +1
Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLY--YKRFFPYYVSNVLAGLDSDGKGCVYSY 558
L++A ++YE HN+ ++ A+A M+S +L+ K F PY V ++ G + D +Y+
Sbjct: 68 LMRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDDDP-ALYNL 126
Query: 559 DPIGHCARHNFRAGGSAAAQLQPLLE 636
DP G ++ A GS + +LE
Sbjct: 127 DPSGSIIEEDYTATGSGSPTAYGVLE 152
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 49.6 bits (113), Expect = 1e-04
Identities = 21/77 (27%), Positives = 45/77 (58%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
++L+ + YE E + +T ++A++LS +++ +RF P++ ++ G+D +G + D
Sbjct: 65 KILKLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGIDEEGPHLIV-MD 123
Query: 562 PIGHCARHNFRAGGSAA 612
P+G N+ A G+ A
Sbjct: 124 PLGSLIEDNYAALGTGA 140
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +1
Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 558
TR++ ++ YE K ++ A A++LS +LY + P+ + G+D G +Y
Sbjct: 60 TRIMNVEIKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQ-LYVL 118
Query: 559 DPIGHCARHNFRAGGSAA 612
DPIG N+ A GS A
Sbjct: 119 DPIGSLIEDNYAAVGSGA 136
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 47.6 bits (108), Expect = 4e-04
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 564
L+ R+ +YE + + + + M++ +LY KRF PYY V+AGLD K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 565 IG-HCARHNFRAGGSAAAQLQPLLEQSNW 648
IG +F G+ A Q+ + E S W
Sbjct: 127 IGCPMVTDDFVVSGTCAEQMYGMCE-SLW 154
Score = 37.5 bits (83), Expect = 0.45
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377
NGG+++A+ G + I AD R + T D +K+F + + +G G D T+
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 63
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 46.8 bits (106), Expect = 7e-04
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Frame = +1
Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAG------LDSDGKG- 543
LL+ R+ +YE M A MLS++LY RF PY+V+ ++ G LD +GK
Sbjct: 68 LLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDDEGKKV 127
Query: 544 CVY-----SYDPIG-HCARHNFRAGGSAAAQLQPLLEQSNWLKE 657
C + +YD IG C +F G + QL + E S ++K+
Sbjct: 128 CSFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCE-SLYIKD 170
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 46.4 bits (105), Expect = 0.001
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +1
Query: 469 MLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 570
MLY KRF PYY+S ++AG+D +G V SYD IG
Sbjct: 96 MLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYIG 129
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +3
Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377
+GG++V +AG I AD R + + + K+F++++ + G G + D T+
Sbjct: 9 SGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTM 65
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
R+L+A + Y+ + MTT A+A +LS +L ++FPY V ++ G + + + D
Sbjct: 63 RILEAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTIANLD 120
Query: 562 PIGHCARHNFRAGGSAAAQLQPLLEQ 639
P+G ++ A GS +LE+
Sbjct: 121 PLGGLIFDDYTATGSGTPFAIAILEE 146
>UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7;
Halobacteriaceae|Rep: Proteasome, subunit alpha -
Halobacterium salinarium (Halobacterium halobium)
Length = 255
Score = 44.8 bits (101), Expect = 0.003
Identities = 30/86 (34%), Positives = 42/86 (48%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
R L+A +YE + M+ A++ M S +L FF V +L G+D DG G V+S D
Sbjct: 118 RSLRAEANLYEARRGEYMSIDALSTMASNLLRGGPFFR--VVPILGGVDDDG-GHVFSLD 174
Query: 562 PIGHCARHNFRAGGSAAAQLQPLLEQ 639
P G + A GS +LEQ
Sbjct: 175 PAGSSMSDTYTAQGSGMPYALGVLEQ 200
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 44.4 bits (100), Expect = 0.004
Identities = 23/85 (27%), Positives = 44/85 (51%)
Frame = +1
Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 564
+L+ +++YE + + VA +LS +L+ +FFPY V ++ G D+ + +Y+ D
Sbjct: 83 VLREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYDTQPR--LYTLDL 140
Query: 565 IGHCARHNFRAGGSAAAQLQPLLEQ 639
G + A GS + +LE+
Sbjct: 141 FGSITEDKYTATGSGSPIAYGVLEE 165
Score = 35.1 bits (77), Expect = 2.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377
+G + V + D+ ++ AD R + GF I +R KK+ LS + +G D L
Sbjct: 24 SGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQIL 80
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +1
Query: 397 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 570
R ++Y+ + M A ++S +LY KRF PY+ V+AGL D + + + D IG
Sbjct: 70 RHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFICTMDCIG 127
Score = 37.1 bits (82), Expect = 0.60
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377
NG ++VA+ G + I +D RL D +++FK+ + +G +G D TL
Sbjct: 7 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTL 63
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 43.6 bits (98), Expect = 0.007
Identities = 24/85 (28%), Positives = 44/85 (51%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
++++A + +Y+ +N ++ A A + + +L R P YV +L G+D D K +YS D
Sbjct: 65 KIIEAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMDGD-KPSLYSLD 120
Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636
P G + + GS + +LE
Sbjct: 121 PAGGMIEDTYISTGSGSIVAYGVLE 145
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 43.6 bits (98), Expect = 0.007
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +3
Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377
GG++VA+AGD+ I +D R+ + DQKK+ K+++ +G G D T+
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTV 63
Score = 42.3 bits (95), Expect = 0.016
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 397 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG-H 573
R +YE N+++ +++M+S + Y RF Y+ ++AGLD K + D IG
Sbjct: 70 RKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCV 129
Query: 574 CARHNFRAGGSAAAQLQPLLE 636
A +F A G+ L + E
Sbjct: 130 SAPRDFVAVGTGQEYLLGVCE 150
>UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 200
Score = 43.2 bits (97), Expect = 0.009
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 564
+L+ + + + K M + ++ST+LY KRF PY + ++AG +GK + + D
Sbjct: 63 ILEYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTENGKPFLGTVDC 122
Query: 565 IGHCAR-HNFRAGGSAAAQLQPLLE 636
IG + N+ G+ + PL++
Sbjct: 123 IGAISYISNYACIGNLCENIFPLIQ 147
>UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome beta subunit -
Pyrobaculum aerophilum
Length = 202
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/83 (25%), Positives = 41/83 (49%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
L R Y+ E+ + + A+ +S +L+Y R + Y V +++ G+D + +Y D +
Sbjct: 60 LTLRAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMVDWL 119
Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636
G + + A GS + + LE
Sbjct: 120 GTVTKEKYIATGSGSPYAKGALE 142
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 42.7 bits (96), Expect = 0.012
Identities = 24/85 (28%), Positives = 44/85 (51%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
R ++A +++Y + +M AVA +LS ML ++ PY V ++ G+D+ V+S D
Sbjct: 65 RYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPH--VFSID 122
Query: 562 PIGHCARHNFRAGGSAAAQLQPLLE 636
G + + GS + + +LE
Sbjct: 123 AAGGSVEDIYASTGSGSPFVYGVLE 147
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 42.7 bits (96), Expect = 0.012
Identities = 25/75 (33%), Positives = 38/75 (50%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
RLL+A ++Y + K M+ A+A +L+ ML R PY ++ G D K +YS D
Sbjct: 67 RLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDE--KPRLYSVD 124
Query: 562 PIGHCARHNFRAGGS 606
+G + A GS
Sbjct: 125 MMGGITEDKYVAAGS 139
>UniRef50_Q6BG89 Cluster: Proteasome subunit beta type; n=3;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 236
Score = 41.1 bits (92), Expect = 0.037
Identities = 19/67 (28%), Positives = 38/67 (56%)
Frame = +3
Query: 165 VPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLG 344
+ G +QH P GGS++A+ + ++G DT S G ++ KK+ ++S++T+
Sbjct: 7 ISGEQQHTTSPVV-TGGSVIALVYNGGVIVGTDTLCSYGSMAAFKNVKKIAQISKNTIYA 65
Query: 345 ATGCWCD 365
++G + D
Sbjct: 66 SSGEFSD 72
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 41.1 bits (92), Expect = 0.037
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 564
L+ ++ +YE + + + M++ LY K F PYY V+AGLD K S D
Sbjct: 67 LKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPFSCSLDL 126
Query: 565 IGH-CARHNFRAGGSAAAQLQPLLEQSNW 648
IG +F GS A Q+ + E S W
Sbjct: 127 IGFPMVTDDFVVNGSYAEQMYGMCE-SLW 154
>UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum|Rep: Proteasome endopeptidase complex -
Halorubrum lacusprofundi ATCC 49239
Length = 243
Score = 41.1 bits (92), Expect = 0.037
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
L+A +YE K M+ A++ + +L F Y V +L G+D +G +YS D +
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGSH-IYSIDAL 164
Query: 568 GHCARHNFRAGGSAAAQLQPLLEQ 639
G + GS + +LEQ
Sbjct: 165 GGTTEEEYTVTGSGSQYALGVLEQ 188
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 41.1 bits (92), Expect = 0.037
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
RLL A ++Y+ +++ A A +LS +L+ R FP+ ++ G D ++S D
Sbjct: 63 RLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLD 122
Query: 562 PIGHC-ARHNFRAGGSAAAQLQPLLE 636
P+G F A GS + +LE
Sbjct: 123 PLGGMNEEKTFTATGSGSPIAYGVLE 148
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 40.3 bits (90), Expect = 0.064
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 397 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDPIG- 570
R +MY+ + + A A ++S+MLY RF P++V V+ +D G+ + + D IG
Sbjct: 70 RTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCATDLIGA 129
Query: 571 HCARHNFRAGGSAAAQLQPLLE 636
C ++ G+ A L + E
Sbjct: 130 PCEPEDYVCAGTCAESLHGMCE 151
>UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beta 2 subunit, putative -
Babesia bovis
Length = 218
Score = 39.5 bits (88), Expect = 0.11
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +1
Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYS 555
+++++A + ++++++K ++T A A + L Y R PY V ++AG+D DG ++
Sbjct: 59 SKMIKATLDYHKYKNSKELSTNAAAHFVRLELAEYLRQSPYQVDMLIAGIDQDGPK-LFW 117
Query: 556 YDPIGHCARHNFRAGGSAAAQLQPLLEQ 639
D + C + + G L+ LL++
Sbjct: 118 IDYLASCTQADTAVHGYGGFLLRGLLDK 145
>UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 198
Score = 39.1 bits (87), Expect = 0.15
Identities = 21/83 (25%), Positives = 42/83 (50%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
+ A ++ + E + + VA+M+S M+Y +R+FP ++ G+ K +Y+ DP+
Sbjct: 66 IAALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPL 123
Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636
G + A G+ A +L+
Sbjct: 124 GSVLPDEYAAVGTGAEMALGVLD 146
>UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 265
Score = 38.7 bits (86), Expect = 0.20
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +3
Query: 174 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353
A HR P A +I+A+ D V+GAD+R STG + R K+ + E+ + +G
Sbjct: 37 ATTHRAPPRARAQTTIMAVKYADGVVLGADSRTSTGTYVANRASDKITPICENVWMCRSG 96
Query: 354 CWCDTLTLXA 383
DT + A
Sbjct: 97 SAADTQNVAA 106
>UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 193
Score = 38.7 bits (86), Expect = 0.20
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +1
Query: 445 AVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQ 624
+VA+M+S M+Y +RFFP ++ G+ G+ +Y+ D +G + A G+ A
Sbjct: 81 SVAKMMSNMMYERRFFPLLTQVIVGGV--VGEPAIYTLDSLGSVLPDEYAAVGTGAEMAL 138
Query: 625 PLLE 636
+L+
Sbjct: 139 GVLD 142
>UniRef50_A0RWA6 Cluster: 20S proteasome, alpha and beta subunit;
n=4; Thermoprotei|Rep: 20S proteasome, alpha and beta
subunit - Cenarchaeum symbiosum
Length = 245
Score = 38.3 bits (85), Expect = 0.26
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +1
Query: 391 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 570
Q+ MY+ +A Y P+ V+ ++ G+D GKG ++ DP G
Sbjct: 96 QSNRMMYDESVEVEAVAKHLADQCQQFTQYAGVRPFGVALIIGGVDDGGKGQLFLTDPSG 155
Query: 571 HCARHNFRAGGSAAAQLQPLLEQS 642
++ A G+ + Q+ LE+S
Sbjct: 156 TYISYDAIAIGAGSEQVTEFLEKS 179
>UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome
subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar
to proteasome subunit RC10-II - Ornithorhynchus anatinus
Length = 181
Score = 37.9 bits (84), Expect = 0.34
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLXAS 386
NGG+++A+ G + I AD R + T D +K+F + + +G G D T+
Sbjct: 31 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVPPR 90
Query: 387 S 389
S
Sbjct: 91 S 91
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 37.9 bits (84), Expect = 0.34
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCD 365
G +IV +A +D V+GADTR + G + +D +K+ +LS++ G D
Sbjct: 41 GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAGAGTAAD 92
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 37.9 bits (84), Expect = 0.34
Identities = 26/95 (27%), Positives = 42/95 (44%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 561
R L+ + YE + + + +A++LS +LY + P V+ G D G +Y D
Sbjct: 74 RALRMEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQ-IYVLD 132
Query: 562 PIGHCARHNFRAGGSAAAQLQPLLEQSNWLKEYAE 666
P+G + A GS ++E KEY E
Sbjct: 133 PVGSLIEDKYVALGSGGPIALGIIE-----KEYRE 162
>UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus lucimarinus CCE9901
Length = 246
Score = 37.1 bits (82), Expect = 0.60
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377
G +IVA V+GAD+R+STG + R K+ L++ T++ +G DT L
Sbjct: 17 GTTIVACEYAGGVVLGADSRVSTGIYVSNRASDKMCALNDRTIMCRSGSAADTEAL 72
>UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 203
Score = 36.3 bits (80), Expect = 1.0
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDT 368
G +I+AI DD +IGAD+R S G + +R KL ++++ + +G DT
Sbjct: 10 GTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADT 62
>UniRef50_Q5DAM2 Cluster: Proteasome subunit beta type; n=1;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 248
Score = 35.9 bits (79), Expect = 1.4
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 177 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353
K H P G S++ I D V+ AD +S G D +++FK++ESTV+ +G
Sbjct: 20 KHHTMTPIC-TGTSVIGIKYKDGVVLAADLLVSYGSLAKYMDFERMFKVNESTVMCCSG 77
>UniRef50_Q7XY60 Cluster: Proteasome chain protein; n=1; Griffithsia
japonica|Rep: Proteasome chain protein - Griffithsia
japonica (Red alga)
Length = 187
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 213 GSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353
GSI+A+ G DY +I AD + + D K+ +L E + A G
Sbjct: 3 GSIIALQGADYVLIAADVSCARSIVVMKDDMDKIRQLDEGKLFAAAG 49
>UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_66910_67563 - Giardia lamblia
ATCC 50803
Length = 217
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +3
Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353
GG++VA+A D ++ ADT L+ G + T + +++ + T++G TG
Sbjct: 7 GGTVVAVAHKDGVLMAADTVLNYGSTRRTDNYERIIPVGTHTLIGFTG 54
>UniRef50_A5B031 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 108
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 177 KQHRFEPYADNGGSIVAIAGDDYAVIGAD 263
+Q + Y +NGGS VAIAG DY VI A+
Sbjct: 38 QQANWSSYNNNGGSCVAIAGADYCVITAE 66
>UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Tetrahymena thermophila SB210
Length = 227
Score = 34.7 bits (76), Expect = 3.2
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +3
Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377
G SI+A+ D ++GAD+R ++G I R Q K+ L E +G DT TL
Sbjct: 25 GTSIMALVYDGGVLVGADSRTTSGSYIADRAQDKVDYLHERIYCLRSGSAADTQTL 80
>UniRef50_Q60KD2 Cluster: Putative uncharacterized protein CBG24113;
n=2; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24113 - Caenorhabditis
briggsae
Length = 388
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/55 (29%), Positives = 36/55 (65%)
Frame = -1
Query: 293 IYGKSSAETSVCSDNGIIIAGDGYNTTSVVRVGLETMLFRTRHSIFRKVLVNAQH 129
+YG+S+ + S GI++ D Y+T+ VVR E ++ +++ ++ +K+L++ Q+
Sbjct: 283 LYGESAIDDSTIE--GILLVADMYDTSIVVRKCEEFLMEKSKKNLKKKLLLSTQY 335
>UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 204
Score = 33.9 bits (74), Expect = 5.6
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 400 MQMYEHE--HNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGC 546
++ Y HE KS T P+ S + ++ P Y+SN++A +SD KGC
Sbjct: 40 IKFYNHETKERKSKTKPSF-NFGSLNIRFQTKLPEYLSNIIAYAESDNKGC 89
>UniRef50_A3V8G4 Cluster: Putative glycosyltransferase; n=3;
Rhodobacterales|Rep: Putative glycosyltransferase -
Loktanella vestfoldensis SKA53
Length = 225
Score = 33.1 bits (72), Expect = 9.7
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 526 DSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQ 624
DS CVY D G+ ARHN R G S AQ++
Sbjct: 147 DSYDHACVYLRDIAGYGARHNVRPGVSGLAQVE 179
>UniRef50_Q5KHQ5 Cluster: Expressed protein; n=6;
Tremellomycetes|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 580
Score = 33.1 bits (72), Expect = 9.7
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = -1
Query: 683 KELLLHSAYSLSQFDCSRSGCSCAAAEPPARKLWRAQC---PIGS*LYTHPLPSLSKPAN 513
KE+ S +Q D +R G + A + P+R WRA P+ P SL+ N
Sbjct: 362 KEIPYELPSSATQLDFARCGKAYARSSEPSRSSWRAHLDHQPLLQKTIIQPCSSLNTEEN 421
Query: 512 TLDT*YGKNRL*YNIVESICATAGVVIDLLCSC 414
D K R N+ E+ C+ G+ + + C
Sbjct: 422 QTD----KYRKTSNMTETSCSKLGIELFVGVPC 450
>UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precursor;
n=14; Magnoliophyta|Rep: Proteasome subunit beta type-6
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 233
Score = 33.1 bits (72), Expect = 9.7
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDT 368
G +I+ + + V+GAD+R STG + R K+ +L+++ + +G D+
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADS 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,889,523
Number of Sequences: 1657284
Number of extensions: 16841719
Number of successful extensions: 47874
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 45576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47856
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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