Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D11
         (887 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    24   1.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   1.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    24   1.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   7.4  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 278 SAETSVCSDNGIIIAGDGYNTTSV 207
           +AE   CS   I + GDGY   S+
Sbjct: 449 NAENGSCSGKTITVGGDGYADISL 472



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 592 GSYGAHSVR*GRNYIHIPY 536
           G+ G+ + R G+NY  +PY
Sbjct: 125 GTAGSQADRDGKNYPAVPY 143


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 278 SAETSVCSDNGIIIAGDGYNTTSV 207
           +AE   CS   I + GDGY   S+
Sbjct: 450 NAENGSCSGKTITVGGDGYADISL 473



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 592 GSYGAHSVR*GRNYIHIPY 536
           G+ G+ + R G+NY  +PY
Sbjct: 126 GTAGSQADRDGKNYPAVPY 144


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 278 SAETSVCSDNGIIIAGDGYNTTSV 207
           +AE   CS   I + GDGY   S+
Sbjct: 450 NAENGSCSGKTITVGGDGYADISL 473



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 592 GSYGAHSVR*GRNYIHIPY 536
           G+ G+ + R G+NY  +PY
Sbjct: 126 GTAGSQADRDGKNYPAVPY 144


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 671 LHSAYSLSQFDCSRSGCSCAAAE 603
           L S Y +S   CS +GCS   AE
Sbjct: 339 LGSLYHISFMACSSAGCSQKVAE 361



 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 60  QIVCKSLKEFPSSEAVXE 7
           Q+  K LKE P+SE + +
Sbjct: 479 QVAVKMLKESPTSEEIRQ 496


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 472 LYYKRFFPYYVSNVL 516
           +++KRF P YVS +L
Sbjct: 168 VFFKRFLPVYVSYLL 182


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 458 ICATAGVVIDLLCSC 414
           IC T GV+I + C C
Sbjct: 42  ICYTIGVIITIGCLC 56


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +1

Query: 163 LCLVRNSIVSSPTRTTEVVL*PSPAMIMP 249
           LC+V NS+      T   V  P  A I P
Sbjct: 306 LCVVNNSVGGESVETVLTVTAPLKAKIEP 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,382
Number of Sequences: 336
Number of extensions: 4460
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)