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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D11
         (887 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar...    90   4e-19
SPCC63.12c |||20S proteasome component beta 3|Schizosaccharomyce...    46   7e-06
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar...    34   0.024
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2...    28   1.5  
SPBC646.03 |||glutamyl-tRNA amidotransferase|Schizosaccharomyces...    28   2.0  
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar...    27   2.7  
SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|ch...    27   2.7  
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc...    27   4.7  
SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|ch...    27   4.7  
SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase Ggt2|Schizosacc...    26   6.2  
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po...    26   6.2  
SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces pombe...    26   8.2  

>SPAC22F8.06 |pam1||20S proteasome component beta
           6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 225

 Score = 89.8 bits (213), Expect = 4e-19
 Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
 Frame = +1

Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
           +Q R+ +Y   H + M+  + A M+ T+LY KRFFPYYV   +AG+D +GKG +YS+DP+
Sbjct: 72  IQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFDPV 131

Query: 568 GHCARHNFRAGGSAAAQLQPLLE-QSNWLKEY 660
           G   R   RAGGSAA  + P L+ Q N   +Y
Sbjct: 132 GSYEREWCRAGGSAANFITPFLDNQVNLHNQY 163



 Score = 66.9 bits (156), Expect = 4e-12
 Identities = 29/66 (43%), Positives = 44/66 (66%)
 Frame = +3

Query: 180 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 359
           Q +F+PY  NGG+ VAIAGD +A++  DTR   G++I TR Q ++ ++ +  V+GA+G  
Sbjct: 3   QSQFDPYVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFE 62

Query: 360 CDTLTL 377
            D L L
Sbjct: 63  ADALAL 68



 Score = 37.9 bits (84), Expect = 0.002
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +3

Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
           D F SA ER I  GDS+ + IIT  G++     L+KD
Sbjct: 189 DAFTSAGERHIEVGDSVLVKIITKEGVETRIIPLKKD 225


>SPCC63.12c |||20S proteasome component beta 3|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 204

 Score = 46.0 bits (104), Expect = 7e-06
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
 Frame = +1

Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 564
           L + ++ +Y+    + +     A ++S+ LY KRF PY+   V+AG+ +D    +  +D 
Sbjct: 66  LFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFICGFDS 125

Query: 565 IGHCA--RHNFRAGGSAAAQLQPLLE 636
           IG C     +F   G+A  QL  + E
Sbjct: 126 IG-CIDFAEDFIVSGTATEQLYGMCE 150



 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 23/57 (40%), Positives = 30/57 (52%)
 Frame = +3

Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377
           NGGS VA+AG +   I +D RL       T +  K+F + + T LG TG   D  TL
Sbjct: 7   NGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDVQTL 63


>SPAC23D3.07 |pup1||20S proteasome component beta
           2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 267

 Score = 34.3 bits (75), Expect = 0.024
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +3

Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDT 368
           G +IV +   D  V+GADTR + G  I  ++ KKL  +S +      G   DT
Sbjct: 35  GTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADT 87


>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 1217

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 418 RVRTSASSLVEDAXKVNVSHQQPVAPNTVLSDN 320
           R++TSA+ LVE   K   S+ + + PN   S N
Sbjct: 588 RIKTSANDLVETLMKCQPSYIRTIKPNQTKSPN 620


>SPBC646.03 |||glutamyl-tRNA amidotransferase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 471

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +3

Query: 135 SVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGD-DYAVIGADT 266
           S N  F     P  K   ++    +GG+  AIA D  YA +G+DT
Sbjct: 118 SENNLFGRTVNPVVKDSNYDVGGSSGGAAAAIAADICYASVGSDT 162


>SPAC6C3.06c |||P-type ATPase, calcium
           transporting|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1033

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 401 CRCTNTSITNL*PLRQSHRCSQLCCI 478
           CRCT T   N+  L Q  + + +CCI
Sbjct: 743 CRCTPTQKANMTRLIQEKKQASVCCI 768


>SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 775

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 18/90 (20%), Positives = 38/90 (42%)
 Frame = +3

Query: 69  HSIRSISKRLKLIFP*KSYKMLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYA 248
           H +++  K    +F     K + + +  P  A+P     +     D   +   I GDD  
Sbjct: 318 HLLKTAEKDNDFVFHDLVVKEVELPKISPLQALPPLPLEKLYGSQDGFETAKKIVGDDLF 377

Query: 249 VIGADTRLSTGFSIYTRDQKKLFKLSESTV 338
                + ++T  S+Y+ +  K+F+  ++ V
Sbjct: 378 KAFVPSAVTTASSLYSEETAKVFRAEQAEV 407


>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 226

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 20/77 (25%), Positives = 30/77 (38%)
 Frame = +1

Query: 385 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 564
           LL+  + MY  +     +    A + S M Y  +        ++AG D    G VYS   
Sbjct: 82  LLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNM-LSAGLIVAGYDEKTGGDVYSIPL 140

Query: 565 IGHCARHNFRAGGSAAA 615
            G   +     GGS +A
Sbjct: 141 GGSLHKQPLAIGGSGSA 157


>SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 678

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 610 AAQLQPLLEQSNWLKEYAECNRSS 681
           + QL+P+++  NWL+ + E + SS
Sbjct: 396 SVQLKPMMQYVNWLEAFYESHESS 419


>SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase
           Ggt2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 611

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 302 VSGIYGKSSAETSVCSDNGIIIAGDGYN 219
           V G  G  ++E  VCSD G+ +  DG N
Sbjct: 77  VRGRRGAVASEVPVCSDIGVSMLADGGN 104


>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 646

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 225 AIAGDDYAVIGADTRLSTGFSI 290
           AI GD Y+ IG++     GFSI
Sbjct: 321 AIVGDTYSTIGSNVEALPGFSI 342


>SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 377

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 22/77 (28%), Positives = 30/77 (38%)
 Frame = +1

Query: 406 MYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARH 585
           ++  E   S  TPAV    +  +      P  VS VL G+DS  +  V    P+    R 
Sbjct: 105 LFGREKQNSEATPAVQPPATCPMSNSNQKPAGVSEVLTGVDSKQQSYVPEGCPVATPKRG 164

Query: 586 NFRAGGSAAAQLQPLLE 636
            F   G+   Q Q   E
Sbjct: 165 WFNWFGNNDDQKQEAYE 181


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,497,791
Number of Sequences: 5004
Number of extensions: 72878
Number of successful extensions: 236
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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