Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D11
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0656 + 19267392-19267432,19267530-19267637,19269114-192691... 109 4e-24
08_02_1353 + 26335306-26335448,26336025-26336106,26336322-263364... 90 2e-18
06_03_0903 - 25816395-25816493,25816695-25816779,25817390-258174... 44 1e-04
02_01_0614 - 4599035-4599083,4599209-4599303,4599410-4599494,460... 44 2e-04
03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871 37 0.025
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 35 0.075
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 35 0.099
09_04_0728 - 19771975-19772093,19772131-19772224,19772322-197725... 33 0.23
02_04_0055 - 19290975-19292312 31 1.2
10_08_1038 - 22485394-22485960,22486712-22487197 30 2.1
11_04_0235 - 15209003-15211187,15212242-15212319,15212743-15213527 30 2.8
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527... 29 4.9
02_04_0641 - 24667637-24667753,24670088-24670324 29 4.9
09_06_0204 - 21559024-21559287,21559445-21559567,21559665-215597... 29 6.5
11_01_0807 - 7178278-7178548,7178629-7178756,7178847-7179815,718... 28 8.6
07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595 28 8.6
>09_04_0656 +
19267392-19267432,19267530-19267637,19269114-19269195,
19269637-19269766,19269882-19270024,19270198-19270284,
19270384-19270458
Length = 221
Score = 109 bits (261), Expect = 4e-24
Identities = 46/83 (55%), Positives = 62/83 (74%)
Frame = +1
Query: 388 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 567
L AR +Y+H+HNK M+ PA+AQ+LS LYYKRFFPYY NVL GLDS+GKGCV++YD +
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 131
Query: 568 GHCARHNFRAGGSAAAQLQPLLE 636
G R + A G+ +A + P+L+
Sbjct: 132 GSYERTGYSAQGTGSALIMPVLD 154
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +3
Query: 198 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353
Y +NGG+ VAIAG DY V+ ADTRLS G++I TRD K+ +L++ L ++G
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSG 60
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
DVF SA ERDIYTGD + I++I G + E +LRKD
Sbjct: 185 DVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>08_02_1353 +
26335306-26335448,26336025-26336106,26336322-26336451,
26336486-26336548,26336549-26336691,26336827-26336913,
26337014-26337088
Length = 240
Score = 90.2 bits (214), Expect = 2e-18
Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 21/106 (19%)
Frame = +1
Query: 382 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSD--------- 534
R L A+ +YEH HNK M+ PA+AQ+LS LYYKRFFPYY NVL GLDS+
Sbjct: 68 RNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEVAAHQYERM 127
Query: 535 ------------GKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLE 636
GKGCV++YD +G R + A G+ AA + P+L+
Sbjct: 128 ITTCENIFSSFAGKGCVFTYDAVGSYERTGYSAQGTGAALMMPVLD 173
Score = 71.3 bits (167), Expect = 9e-13
Identities = 33/72 (45%), Positives = 48/72 (66%)
Frame = +3
Query: 186 RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCD 365
RFE Y +NGG+ VA+AG DY V+ ADTRLS G+SI +RD K+ L++ VL ++G D
Sbjct: 3 RFEVYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGD 62
Query: 366 TLTLXASSTSED 401
L + T+++
Sbjct: 63 VKALQRNLTAKE 74
Score = 48.0 bits (109), Expect = 1e-05
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +3
Query: 717 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 827
DVF SA ERDIYTGD + I++I + G E ELRKD
Sbjct: 204 DVFASATERDIYTGDKLEIVVINSAGSHREFIELRKD 240
>06_03_0903 -
25816395-25816493,25816695-25816779,25817390-25817479,
25818566-25818673,25818771-25818952,25819032-25819216,
25820812-25820971
Length = 302
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +1
Query: 397 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 570
R ++Y+ + M A ++S +LY KRF PY+ V+AGL D + + + D IG
Sbjct: 183 RHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFICTMDCIG 240
Score = 37.1 bits (82), Expect = 0.019
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377
NG ++VA+ G + I +D RL D +++FK+ + +G +G D TL
Sbjct: 120 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTL 176
>02_01_0614 -
4599035-4599083,4599209-4599303,4599410-4599494,
4600107-4600196,4600772-4600879,4600983-4601197
Length = 213
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 397 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 570
R ++Y+ + M A A ++S +LY KRF PY+ V+AGL + + + + D IG
Sbjct: 79 RHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFICTMDCIG 136
Score = 37.1 bits (82), Expect = 0.019
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 207 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 377
NG ++VA+ G + I +D RL D +++FK+ + +G +G D TL
Sbjct: 16 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTL 72
>03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871
Length = 212
Score = 36.7 bits (81), Expect = 0.025
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 379 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYK-RFFPYYVSNVLAGLDSDGKGCVYS 555
T +Q + +Y+ +N ++T A A L R PYYV+ +LAG DSD +Y
Sbjct: 57 TEFIQKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYY 116
Query: 556 YDPI 567
D I
Sbjct: 117 IDYI 120
Score = 35.1 bits (77), Expect = 0.075
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 219 IVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 353
++ + G D+AV+ ADT ++ D+ K+ L ++GA+G
Sbjct: 4 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASG 48
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 35.1 bits (77), Expect = 0.075
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDT 368
G +IV + D V+ AD+R STG + R K+ +L+++ + +G DT
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAADT 77
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 34.7 bits (76), Expect = 0.099
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 210 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDT 368
G +IV + D V+ AD+R STG + R K+ +L+++ + +G DT
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADT 77
>09_04_0728 -
19771975-19772093,19772131-19772224,19772322-19772507,
19772596-19772767,19772854-19772983,19773060-19773136,
19774109-19774194,19774508-19774585,19775916-19776045,
19776379-19776423,19776508-19776618,19776801-19777057,
19777153-19777302,19777899-19778008,19778426-19778546
Length = 621
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/66 (25%), Positives = 39/66 (59%)
Frame = +3
Query: 168 PGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGA 347
PG ++ ++ PY G SI+A+ D ++ +DT S G ++ + +++ + + +++GA
Sbjct: 357 PGTQRTQY-PYV-TGSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHSLIGA 414
Query: 348 TGCWCD 365
+G + D
Sbjct: 415 SGEFSD 420
>02_04_0055 - 19290975-19292312
Length = 445
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 502 VSNVLAGL-DSDGKGCVYSYDPIGHCARHNFRAGGSAAA 615
VS AG+ D DG D I +C+ H +R G +AAA
Sbjct: 5 VSEAAAGVEDQDGGVAAAGMDGIQYCSEHPYRPGAAAAA 43
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 629 SGCSCAAAEPPARKLWRAQCPIGS*LYTHPLPSLS-KPANT 510
S SCAAA PP+ + R PIG L P L+ PANT
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIG--LARSPAHLLAPTPANT 134
>11_04_0235 - 15209003-15211187,15212242-15212319,15212743-15213527
Length = 1015
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 717 PSEEPRAFSLVKGASVTFCIFFKPI*LFEERLQLCSSGTTSAEVMART 574
P+E+ A +L G+ +F +P E L LCS G TS E + T
Sbjct: 943 PTEDAAALALAAGSLRPVPVFRRPKADQERTLDLCSMGQTSRESCSNT 990
>05_01_0588 +
5278013-5278153,5278641-5278782,5278923-5279019,
5279130-5279199,5279284-5279388,5279531-5279629,
5280062-5280152,5280238-5280311
Length = 272
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 198 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDT 368
+ G +IV + D V+GADTR + G + ++ +K+ ++ + G DT
Sbjct: 34 FLKTGTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADT 90
>02_04_0641 - 24667637-24667753,24670088-24670324
Length = 117
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 147 NFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGF 284
N P A+PGA R + +G I+GD YA +G D+ GF
Sbjct: 56 NTPAAALPGAGPLR---RSKSGTKSAKISGDIYADLGVDSEFEIGF 98
>09_06_0204 - 21559024-21559287,21559445-21559567,21559665-21559718,
21559800-21560721,21560803-21561212,21561284-21561408,
21561524-21561571,21561668-21561789,21562008-21562099,
21562242-21562429,21562582-21562696,21562780-21562863,
21562994-21563087,21563393-21563510,21563805-21563930,
21564002-21564074,21564209-21564296,21564674-21564744,
21564839-21564918,21565004-21565065,21565169-21565310,
21565410-21565510,21565600-21565644,21565725-21565789,
21566088-21566163,21566246-21566300,21566416-21566773
Length = 1366
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 20 SLLGNSLRLLQTICCMSLDSKYFEAIKTNFSIKIIQ--NVER*RELS*ICCAWCETA 184
S+L LR +CC S+ E +K + K+ + + E +E ICCA C+TA
Sbjct: 1044 SMLPGDLRT-DGMCCKSMKMSRCENVKVERNSKLAEFPSRESTQEKLFICCARCKTA 1099
>11_01_0807 -
7178278-7178548,7178629-7178756,7178847-7179815,
7180465-7180518,7180622-7180798,7180913-7181926,
7182038-7182101,7182247-7182563,7182797-7182847
Length = 1014
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 726 ISAAERDIYTGDSIYILIITAHG-IQEEKFELRKD 827
+S E ++ T ++YI++I+ HG ++ E EL +D
Sbjct: 104 VSDEEEEVTTDRNLYIVLISIHGLVRGENMELGRD 138
>07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595
Length = 904
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 588 LPRWWFRCCTAATAPRTIKLA*RIC 662
LPRWW CC T R ++C
Sbjct: 397 LPRWWCCCCFTVTGSRFTDYIYQLC 421
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,708,634
Number of Sequences: 37544
Number of extensions: 484906
Number of successful extensions: 1299
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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