Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D10
(907 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 1e-34
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 139 3e-33
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 130 2e-30
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 5e-19
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 9e-16
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12
SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39) 60 2e-09
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 6e-06
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07) 46 3e-05
SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07) 46 3e-05
SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40) 45 1e-04
SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40) 42 5e-04
SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 34 0.14
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 34 0.18
SB_23117| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_58505| Best HMM Match : VWA (HMM E-Value=8.8e-22) 29 6.8
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 144 bits (348), Expect = 1e-34
Identities = 64/100 (64%), Positives = 75/100 (75%)
Frame = +3
Query: 606 RTKGSVAHAGPSXTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKY 785
+ +G TTGALEGQHFR++G LVSLSEQNL+DCS +YGNNGC GGLMDNAF+Y
Sbjct: 131 KNQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCEGGLMDNAFQY 190
Query: 786 IKDXGGIDTEQTYPYEGVDDKCRYNPXNTGAEDVGFVDIP 905
IK+ GGIDTE++YPY D C YN GA+D GFVDIP
Sbjct: 191 IKENGGIDTEKSYPYLAKDGVCHYNKSAIGAKDTGFVDIP 230
Score = 77.0 bits (181), Expect = 2e-14
Identities = 37/81 (45%), Positives = 51/81 (62%)
Frame = +2
Query: 398 SYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDW 577
S+KL MN GDM E +T+ G K KH ++ +GA F+ PANVK+ + +DW
Sbjct: 69 SFKLAMNHLGDMTSLEISQTLLGL-KLKKHAES------QPKGATFLPPANVKVVDSIDW 121
Query: 578 RKHGAVTDIKDQGKCGSCWSF 640
R G VT +K+QG+CGSCW+F
Sbjct: 122 RSKGYVTPVKNQGQCGSCWAF 142
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 139 bits (336), Expect = 3e-33
Identities = 60/99 (60%), Positives = 75/99 (75%)
Frame = +3
Query: 606 RTKGSVAHAGPSXTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKY 785
+ +G TTG+LEGQ+F+++G LVSLSEQNL+DCS YGNNGC GGLMD AFKY
Sbjct: 349 KNQGQCGSCWAFSTTGSLEGQNFKKTGKLVSLSEQNLVDCSTAYGNNGCQGGLMDYAFKY 408
Query: 786 IKDXGGIDTEQTYPYEGVDDKCRYNPXNTGAEDVGFVDI 902
IK+ GGIDTE++YPYE +D+CR+ N GA D GFVD+
Sbjct: 409 IKENGGIDTEESYPYEARNDRCRFQKSNIGAVDTGFVDV 447
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = +2
Query: 398 SYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDW 577
S+ L MN GD+ EF G H N K GS F++P++V++P+ VDW
Sbjct: 287 SFTLAMNHLGDLTQDEFRYFYTGMRS---HYSNYTKKQGSA----FLAPSHVQVPDTVDW 339
Query: 578 RKHGAVTDIKDQGKCGSCWSF 640
RK G VT +K+QG+CGSCW+F
Sbjct: 340 RKEGYVTPVKNQGQCGSCWAF 360
Score = 34.3 bits (75), Expect = 0.14
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 244 FDLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHN 372
FD +++W A+KL H Y + E+ R I+ ++ I KHN
Sbjct: 240 FDEDEQQWQAWKLFHTKKYTTVTEEGARKAIWRDNLKKIQKHN 282
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 130 bits (314), Expect = 2e-30
Identities = 57/100 (57%), Positives = 70/100 (70%)
Frame = +3
Query: 606 RTKGSVAHAGPSXTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKY 785
+ +G TTG++EGQHFR++G LVSLSEQNLIDCS YGNNGC GGLMDNAF+Y
Sbjct: 59 KNQGQCGSCWAFSTTGSVEGQHFRKTGSLVSLSEQNLIDCSGSYGNNGCQGGLMDNAFRY 118
Query: 786 IKDXGGIDTEQTYPYEGVDDKCRYNPXNTGAEDVGFVDIP 905
I+ GGIDTE +YPY G C ++ + GA G+ DIP
Sbjct: 119 IESNGGIDTESSYPYLGQQGSCHFSSSHVGARVTGYQDIP 158
Score = 62.9 bits (146), Expect = 3e-10
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +2
Query: 407 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKH 586
+ MN GD+ EF G A HN K G A ++ P+NVK+P VDW +
Sbjct: 1 MAMNHLGDLTEDEFRYFYLGVR--AHHNST---KRG---WATYMPPSNVKIPSSVDWSQK 52
Query: 587 GAVTDIKDQGKCGSCWSF 640
G VT +K+QG+CGSCW+F
Sbjct: 53 GYVTGVKNQGQCGSCWAF 70
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 92.3 bits (219), Expect = 5e-19
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Frame = +3
Query: 645 TTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKYIK--DXGGIDTEQ 818
+TG+LEGQHFR++G LVSLSEQNL+DCS++YGNNGC GGLMD AFKYIK D +
Sbjct: 353 STGSLEGQHFRKTGKLVSLSEQNLVDCSKKYGNNGCEGGLMDYAFKYIKANDDNNLPFYA 412
Query: 819 TYPYEGVDD 845
Y Y +D
Sbjct: 413 MYRYIKAND 421
Score = 48.0 bits (109), Expect = 1e-05
Identities = 27/74 (36%), Positives = 39/74 (52%)
Frame = +2
Query: 398 SYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDW 577
SYKL MN + D+ EF + G+ + S G+ F+ +NV+LP +VDW
Sbjct: 220 SYKLDMNHFADLTVTEFKQRFMGYRAASN----------STGGSTFLPLSNVQLPAEVDW 269
Query: 578 RKHGAVTDIKDQGK 619
R G VT +K+Q K
Sbjct: 270 RDKGFVTAVKNQEK 283
Score = 44.8 bits (101), Expect = 1e-04
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 780 KYIKDXGGIDTEQTYPYEGVDDKCRYNPXNTGA 878
+YIK+ GIDTEQ+YPY D +C + P + GA
Sbjct: 450 RYIKNNDGIDTEQSYPYTARDGQCHFKPGSVGA 482
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 645 TTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKYIKDXGGIDTEQTY 824
TTG +EG F ++ YL LS+QNL+DCS GNN C+GG +++YI GGI TE++Y
Sbjct: 669 TTGTIEGTLFLKTKYLTRLSQQNLMDCSWGEGNNACDGGEDFRSYQYIMKSGGIATEESY 728
Query: 825 -PYEGVDDKCRYNPXNTGAEDVGFVDI 902
PY G D C GA G+V+I
Sbjct: 729 GPYLGADGYCHKKDAEIGATITGYVNI 755
Score = 48.0 bits (109), Expect = 1e-05
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +2
Query: 401 YKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWR 580
Y L MN GD E ++ + G T +N L K ++ N +P++++W
Sbjct: 597 YYLAMNHLGDRSDKE-LRVLRGRRYTKGYNGGLPYKPD-------MASIN-DVPDEMNWV 647
Query: 581 KHGAVTDIKDQGKCGSCWSF 640
GAVT +KDQ CGSCWSF
Sbjct: 648 IRGAVTPVKDQAVCGSCWSF 667
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 68.9 bits (161), Expect = 5e-12
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 651 GALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKYIKDXGGIDTEQTY-P 827
GALEG HF Q+G + LSEQ ++DC+ +GN GC GG A ++I GG+ TE++Y
Sbjct: 530 GALEGAHFIQTGLKLDLSEQQIVDCTWGFGNRGCKGGYPYRAMQWILKHGGLATEESYGR 589
Query: 828 YEGVDDKCRYNPXNTGA 878
Y + C + + GA
Sbjct: 590 YLAQEGYCHFKNTSIGA 606
Score = 48.0 bits (109), Expect = 1e-05
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2
Query: 551 VKLPEQVDWRKHGAVTDIKDQGKCGSCWSF 640
V LP VDWRK GAV +K QG CGSC++F
Sbjct: 497 VPLPPHVDWRKAGAVNSVKSQGICGSCYAF 526
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 461 NGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTD 601
N NK +H K ++ K K S ++P+Q+DWR +G TD
Sbjct: 1386 NRKNKKKEHKKRMHAK-------KKRSKRMFEVPDQLDWRNYGNKTD 1425
>SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39)
Length = 504
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +3
Query: 693 VSLSEQNLIDCSEQYGNNGCNGGLMDNAFKYIKDXGGIDTEQTYPYEGVDDKCRYN 860
V ++ L+DC + GC GGL NA+K I+ GG+++E YPY+G D KC++N
Sbjct: 265 VDWRDKELVDCDTI--DKGCEGGLPSNAYKQIEKLGGLESESDYPYKGADSKCKFN 318
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 50.0 bits (114), Expect = 3e-06
Identities = 27/67 (40%), Positives = 35/67 (52%)
Frame = +3
Query: 588 APSPTSRTKGSVAHAGPSXTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLM 767
A SP R +G GA+EG +F ++G L LS Q +IDCS GN GC GG
Sbjct: 323 AVSPV-RGQGICGSCYALAAVGAVEGAYFMKTGKLKELSAQQVIDCSWGSGNRGCKGGYY 381
Query: 768 DNAFKYI 788
+ A +I
Sbjct: 382 NKAMSWI 388
>SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +2
Query: 413 MNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGA 592
MN++ DM EF + A + RGA F++P N++LP +VDWR+ G
Sbjct: 1 MNEFADMCEEEFRNVYLRYRFNASSPQ---------RGATFMAPNNLELPTKVDWRQQGY 51
Query: 593 VTDIKDQGK 619
VT +K+QGK
Sbjct: 52 VTPVKNQGK 60
>SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 48.8 bits (111), Expect = 6e-06
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +3
Query: 672 FRQSGYLVSLSEQNLIDCS----EQY-GNNGCNGGLMDNAFKYIKDXGGIDTEQTYPYEG 836
F + G L++L+EQ L+DC+ E Y GNNGC GG AF ++K G T+ Y G
Sbjct: 33 FVKKGELLNLAEQQLLDCTWSTPEVYHGNNGCLGGWTWKAFSWVKKFGLATTKSYGHYRG 92
Query: 837 VDDKCRYNPXNTGA 878
+ C+ + GA
Sbjct: 93 QEGFCKTSNLTVGA 106
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +3
Query: 672 FRQSGYLVSLSEQNLIDCSEQ-----YGNNGCNGGLMDNAFKYIKDXGGIDTEQTYPYEG 836
F + G L++L+EQ L+DC+ +GNNGC GG AF ++K G T+ Y G
Sbjct: 182 FVKKGELLNLAEQQLLDCTWSTPGVYHGNNGCLGGWTWKAFSWVKKFGIATTKSYGHYRG 241
Query: 837 VDDKCRYNPXNTGA 878
+ C+ + GA
Sbjct: 242 QEGFCKTSNLTVGA 255
>SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07)
Length = 122
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Frame = +3
Query: 684 GYLVSLSEQNLIDCSEQ-----YGNNGCNGGLMDNAFKYIKDXGGIDTEQTYPYEGVDDK 848
G L++L+EQ L+DC+ +GNNGC GG AF ++K G T+ Y G +
Sbjct: 2 GELLNLAEQQLLDCTWSTPGVYHGNNGCLGGWTWKAFSWVKKFGLATTKSYGHYRGQEGF 61
Query: 849 CRYNPXNTGA 878
C+ + GA
Sbjct: 62 CKTSNLTVGA 71
>SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07)
Length = 122
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Frame = +3
Query: 684 GYLVSLSEQNLIDCSEQ-----YGNNGCNGGLMDNAFKYIKDXGGIDTEQTYPYEGVDDK 848
G L++L+EQ L+DC+ +GNNGC GG AF ++K G T+ Y G +
Sbjct: 2 GELLNLAEQQLLDCTWSTPGVYHGNNGCLGGWTWKAFSWVKKFGIATTKSYGHYRGQEGF 61
Query: 849 CRYNPXNTGA 878
C+ + GA
Sbjct: 62 CKTSNLTVGA 71
>SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40)
Length = 251
Score = 44.8 bits (101), Expect = 1e-04
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +3
Query: 690 LVSLSEQNLIDCSEQ-----YGNNGCNGGLMDNAFKYIKDXGGIDTEQTYPYEGVDDKCR 854
L++L+EQ L+DC+ +GNNGC GG AF ++K G T+ Y G + C+
Sbjct: 45 LLNLAEQQLLDCTWSTPGVYHGNNGCLGGWTWKAFSWVKKFGIATTKSYGHYRGQEGFCK 104
Query: 855 YNPXNTGA 878
+ GA
Sbjct: 105 TSNLTVGA 112
>SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +3
Query: 672 FRQSGYLVSLSEQNLIDCSEQ-----YGNNGCNGGLMDNAFKYIKDXGGIDTEQTYPYEG 836
F + G L++L+EQ L+DC+ +GNNGC GG AF ++K G T+ Y G
Sbjct: 58 FVKKGELLNLAEQQLLDCTWSTPGVYHGNNGCLGGWTWKAFSWVKKFGIATTKSYGHYRG 117
>SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40)
Length = 295
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +3
Query: 627 HAGPSXTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKYIKDXGGI 806
+ GP T L +G L SEQ L+DCS +GNNGC GG + + G+
Sbjct: 35 YTGPYLTQEILRS-FSSTTGKLKDFSEQQLLDCSWGFGNNGCRGGFSWRGLVWARKF-GV 92
Query: 807 DTEQTY 824
+ +TY
Sbjct: 93 TSSRTY 98
>SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1142
Score = 34.7 bits (76), Expect = 0.10
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 KEEWSAFKLQHRLNYESEVEDNFRMKIYAE----HKHIIAKHNQK-YEMGLXFLQAGHEQ 420
K+ W K + L+++ + E F+ E +K +I H QK +EM + FL++ HE+
Sbjct: 1027 KDAWKKKKEELDLSHQ-QAEHEFQAMQQVEFEKFYKQMIDLHRQKMFEMEMHFLESKHER 1085
Query: 421 VRRHAPPRVREDYERLQQNCQTQQESVHE 507
R H + ++ L + Q + + E
Sbjct: 1086 KRAHESEKWEIEFRHLNERHQLAKTQLKE 1114
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 34.3 bits (75), Expect = 0.14
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +2
Query: 392 SXSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPE-Q 568
S YKL +N + D+ EF + +K N + N + E +
Sbjct: 82 SLPYKLELNHFPDLTDDEFKSYKGALDDESKDVMNDH-------DDVIDDDVNDETQEDE 134
Query: 569 VDWRKHGAVTDIKDQGKCGSCWSF 640
D GAV K QG CGSCW+F
Sbjct: 135 EDEPSDGAVNPAKGQGTCGSCWAF 158
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 33.9 bits (74), Expect = 0.18
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 575 WRKHGAVTDIKDQGKCGSCWSF 640
W + +++DQG CGSCW+F
Sbjct: 95 WPHCPTIKEVRDQGACGSCWAF 116
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 699 LSEQNLIDCSEQYGNNGCNGGLMDNAFKYIKDXGGIDTEQTYPYEG 836
+S ++L+ C E G GCNGG ++A+ + K G + Q ++G
Sbjct: 138 ISAEDLLSCCETCGM-GCNGGYPESAWDHWKSKGLVTGGQYDSHKG 182
>SB_23117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 683 RLPGVALGAKPHRLLGAVREQRLQRGAHGQRLQVHQGXRGHRHRADL 823
R L A+ R L +Q+ +R H L V +G GH+HR D+
Sbjct: 5 RRTATTLMAELERCLLEDADQKGKRAVHLVHLNVLRGAHGHQHREDV 51
>SB_58505| Best HMM Match : VWA (HMM E-Value=8.8e-22)
Length = 410
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 684 GYLVSLSEQNLIDCSEQYGNNGC----NGGLMDNAFKYIKDXGGIDTEQTYPYEGVDDKC 851
GY +SLS I +++ G+ N + Y++ G DT ++Y EG ++C
Sbjct: 250 GYGISLSNLQTITANQRAGHTYAFQISNFDEFNKLATYLRGACGHDTYKSY--EGFAEEC 307
Query: 852 RYNPXNTGAEDVG 890
P N+G + G
Sbjct: 308 TKCPKNSGHQKTG 320
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 735 YGNNGCNGGLMDNAFKYIKDXGGIDTEQTYPYEGVDDKCRYNPXNTGA 878
Y +G +GG AF ++K G T+ Y G + C+ + GA
Sbjct: 330 YRRSGISGGWTWKAFSWVKKFGIATTKSYGHYRGQEGFCKTSNLTVGA 377
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,333,186
Number of Sequences: 59808
Number of extensions: 486424
Number of successful extensions: 1563
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1560
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2609867019
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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