Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D08
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0317 - 16328558-16328612,16328698-16328901,16329794-163300...   152   4e-37
01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419          152   4e-37
01_07_0219 + 42079095-42079399,42079584-42079728,42081695-420817...    31   0.96 
07_03_0100 + 13389899-13390219,13390723-13390841,13391220-133913...    28   9.0  

>11_04_0317 -
           16328558-16328612,16328698-16328901,16329794-16330065,
           16330152-16330220
          Length = 199

 Score =  152 bits (368), Expect = 4e-37
 Identities = 73/84 (86%), Positives = 80/84 (95%)
 Frame = +2

Query: 524 PXEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 703
           P ED+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGARE+AFRNIKTIAEC+ADELINA
Sbjct: 116 PREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 175

Query: 704 AKGSSNSYAIKKKDELERVAKSNR 775
           AKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 176 AKGSSNSYAIKKKDEIERVAKANR 199



 Score =  141 bits (342), Expect = 6e-34
 Identities = 68/91 (74%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
 Frame = +1

Query: 259 LSLQASISVK-AQYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVR 435
           +SL   ++V   ++A  LPH+AGRY+ KRFRKAQCPIVERLTNSLMMHGRNNGKK+MAVR
Sbjct: 27  ISLADYLAVNPTKHATYLPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKIMAVR 86

Query: 436 IVKHAFEIIHLLTGENPLQVLVTAIINSGPR 528
           IVKHA EIIHLLT  NP+QV+V AIINSGPR
Sbjct: 87  IVKHAMEIIHLLTDANPIQVIVDAIINSGPR 117


>01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419
          Length = 200

 Score =  152 bits (368), Expect = 4e-37
 Identities = 73/84 (86%), Positives = 80/84 (95%)
 Frame = +2

Query: 524 PXEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 703
           P ED+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGARE+AFRNIKTIAEC+ADELINA
Sbjct: 117 PREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 176

Query: 704 AKGSSNSYAIKKKDELERVAKSNR 775
           AKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 177 AKGSSNSYAIKKKDEIERVAKANR 200



 Score =  141 bits (341), Expect = 8e-34
 Identities = 67/91 (73%), Positives = 79/91 (86%), Gaps = 1/91 (1%)
 Frame = +1

Query: 259 LSLQASISVKA-QYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVR 435
           +SL   ++V + ++A  LPH+AGRY+ KRFRKAQCP+VERLTNSLMMHGRNNGKK+MAVR
Sbjct: 28  ISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERLTNSLMMHGRNNGKKIMAVR 87

Query: 436 IVKHAFEIIHLLTGENPLQVLVTAIINSGPR 528
           IVKHA EIIHLLT  NP+QV+V AIINSGPR
Sbjct: 88  IVKHAMEIIHLLTDANPIQVIVDAIINSGPR 118


>01_07_0219 +
           42079095-42079399,42079584-42079728,42081695-42081739,
           42082150-42082265,42082913-42083012,42083103-42083138,
           42083301-42083351,42083431-42083565
          Length = 310

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +2

Query: 566 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 724
           RR+AV  + +RR+  A WL   GAR A  R         A E++ +A G   S
Sbjct: 9   RREAVRAAHVRRIEAAAWL---GARRATRREDAAARCAAAGEVVGSAAGVGRS 58


>07_03_0100 +
           13389899-13390219,13390723-13390841,13391220-13391315,
           13391481-13391553,13392055-13392123
          Length = 225

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -3

Query: 654 LNAASRAPVHKSQIAWLTRRKGETSTA*RRTVPARP 547
           L+A+SR P  + +I    RR+G + +  RR+ P +P
Sbjct: 49  LHASSRVPAARHRIVCPCRRRGGSPSLTRRSSPEKP 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,814,287
Number of Sequences: 37544
Number of extensions: 342019
Number of successful extensions: 795
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)