Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D08
(911 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 169 2e-41
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 169 2e-41
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 169 2e-41
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 169 2e-41
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 165 1e-40
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 113 8e-25
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 2e-18
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.62
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 5.8
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 5.8
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 5.8
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 169 bits (410), Expect = 2e-41
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +2
Query: 524 PXEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 703
P EDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINA
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
Query: 704 AKGSSNSYAIKKKDELERVAKSNR 775
AKGSSNSYAIKKKDELERVAKSNR
Sbjct: 181 AKGSSNSYAIKKKDELERVAKSNR 204
Score = 161 bits (391), Expect = 3e-39
Identities = 77/90 (85%), Positives = 81/90 (90%)
Frame = +1
Query: 259 LSLQASISVKAQYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 438
+SLQ I+VK +YAK LPHSAGRYA FRKAQCPIVERLTNS+MMHGRNNGKKLM VRI
Sbjct: 33 ISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRI 92
Query: 439 VKHAFEIIHLLTGENPLQVLVTAIINSGPR 528
VKHAFEIIHLLTGENPLQVLV AIINSGPR
Sbjct: 93 VKHAFEIIHLLTGENPLQVLVNAIINSGPR 122
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 169 bits (410), Expect = 2e-41
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +2
Query: 524 PXEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 703
P EDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINA
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
Query: 704 AKGSSNSYAIKKKDELERVAKSNR 775
AKGSSNSYAIKKKDELERVAKSNR
Sbjct: 181 AKGSSNSYAIKKKDELERVAKSNR 204
Score = 165 bits (402), Expect = 1e-40
Identities = 79/90 (87%), Positives = 83/90 (92%)
Frame = +1
Query: 259 LSLQASISVKAQYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 438
+SLQ I+VK +YAK LPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRI
Sbjct: 33 ISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRI 92
Query: 439 VKHAFEIIHLLTGENPLQVLVTAIINSGPR 528
VKHAFEIIHLLTGENPLQVLV AIINSGPR
Sbjct: 93 VKHAFEIIHLLTGENPLQVLVNAIINSGPR 122
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 169 bits (410), Expect = 2e-41
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +2
Query: 524 PXEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 703
P EDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINA
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
Query: 704 AKGSSNSYAIKKKDELERVAKSNR 775
AKGSSNSYAIKKKDELERVAKSNR
Sbjct: 181 AKGSSNSYAIKKKDELERVAKSNR 204
Score = 165 bits (402), Expect = 1e-40
Identities = 79/90 (87%), Positives = 83/90 (92%)
Frame = +1
Query: 259 LSLQASISVKAQYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 438
+SLQ I+VK +YAK LPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRI
Sbjct: 33 ISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRI 92
Query: 439 VKHAFEIIHLLTGENPLQVLVTAIINSGPR 528
VKHAFEIIHLLTGENPLQVLV AIINSGPR
Sbjct: 93 VKHAFEIIHLLTGENPLQVLVNAIINSGPR 122
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 169 bits (410), Expect = 2e-41
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +2
Query: 524 PXEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 703
P EDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINA
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
Query: 704 AKGSSNSYAIKKKDELERVAKSNR 775
AKGSSNSYAIKKKDELERVAKSNR
Sbjct: 181 AKGSSNSYAIKKKDELERVAKSNR 204
Score = 165 bits (402), Expect = 1e-40
Identities = 79/90 (87%), Positives = 83/90 (92%)
Frame = +1
Query: 259 LSLQASISVKAQYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 438
+SLQ I+VK +YAK LPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRI
Sbjct: 33 ISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRI 92
Query: 439 VKHAFEIIHLLTGENPLQVLVTAIINSGPR 528
VKHAFEIIHLLTGENPLQVLV AIINSGPR
Sbjct: 93 VKHAFEIIHLLTGENPLQVLVNAIINSGPR 122
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 165 bits (402), Expect = 1e-40
Identities = 79/90 (87%), Positives = 83/90 (92%)
Frame = +1
Query: 259 LSLQASISVKAQYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 438
+SLQ I+VK +YAK LPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRI
Sbjct: 33 ISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRI 92
Query: 439 VKHAFEIIHLLTGENPLQVLVTAIINSGPR 528
VKHAFEIIHLLTGENPLQVLV AIINSGPR
Sbjct: 93 VKHAFEIIHLLTGENPLQVLVNAIINSGPR 122
Score = 165 bits (401), Expect = 2e-40
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +2
Query: 524 PXEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 703
P EDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINA
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
Query: 704 AKGSSNSYAIKKKDELERVAKSNR 775
AKGSSN YAIKK+DELERVAKSNR
Sbjct: 181 AKGSSNFYAIKKRDELERVAKSNR 204
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 113 bits (272), Expect = 8e-25
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +2
Query: 611 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 775
AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 55
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 2e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 352 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 507
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.62
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 415 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 323
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 5.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 415 CHCSDRASLESL*GAPRLGTGLYGNACVH 329
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 5.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 415 CHCSDRASLESL*GAPRLGTGLYGNACVH 329
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 5.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 415 CHCSDRASLESL*GAPRLGTGLYGNACVH 329
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,212,621
Number of Sequences: 237096
Number of extensions: 1815323
Number of successful extensions: 3319
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3311
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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