Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D07
(903 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 307 6e-84
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 307 6e-84
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 306 1e-83
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 306 1e-83
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 295 3e-80
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 295 3e-80
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 282 3e-76
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 147 8e-36
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 146 2e-35
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 145 4e-35
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 145 4e-35
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 143 1e-34
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 142 3e-34
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 142 3e-34
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 141 5e-34
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 138 6e-33
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 102 4e-22
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 101 5e-22
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 30 1.8
At5g16280.1 68418.m01901 expressed protein 29 4.2
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 29 5.6
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 29 5.6
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 29 5.6
At3g12730.1 68416.m01590 myb family transcription factor contain... 28 7.4
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 307 bits (754), Expect = 6e-84
Identities = 137/170 (80%), Positives = 151/170 (88%)
Frame = +3
Query: 177 HVGQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGKHVPRAVF 356
H+GQAG+Q+GNACW LYCLEHGIQPDGQMP+DK +GGG D+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVF 67
Query: 357 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 536
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 537 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQV
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV 177
Score = 85.4 bits (202), Expect = 5e-17
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLNV 903
LEH+D + ++DNEAIYDICRR+L IERPT TNLNR + Q++SS ASL+F G LNV
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNV 250
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 307 bits (754), Expect = 6e-84
Identities = 137/170 (80%), Positives = 151/170 (88%)
Frame = +3
Query: 177 HVGQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGKHVPRAVF 356
H+GQAG+Q+GNACW LYCLEHGIQPDGQMP+DK +GGG D+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVF 67
Query: 357 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 536
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 537 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQV
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV 177
Score = 85.4 bits (202), Expect = 5e-17
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLNV 903
LEH+D + ++DNEAIYDICRR+L IERPT TNLNR + Q++SS ASL+F G LNV
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNV 250
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 306 bits (751), Expect = 1e-83
Identities = 137/170 (80%), Positives = 150/170 (88%)
Frame = +3
Query: 177 HVGQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGKHVPRAVF 356
H+GQAG+Q+GNACW LYCLEHGIQPDGQMP DK +GGG D+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVF 67
Query: 357 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 536
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 537 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQV
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV 177
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/56 (66%), Positives = 47/56 (83%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLNV 903
LEH+D + ++DNEAIYDICRR+L+IERPT TNLNR + Q++SS ASL+F G LNV
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNV 250
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 306 bits (751), Expect = 1e-83
Identities = 137/170 (80%), Positives = 150/170 (88%)
Frame = +3
Query: 177 HVGQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGKHVPRAVF 356
H+GQAG+Q+GNACW LYCLEHGIQPDGQMP DK +GGG D+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVF 67
Query: 357 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 536
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 537 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQV
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV 177
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/56 (66%), Positives = 47/56 (83%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLNV 903
LEH+D + ++DNEAIYDICRR+L+IERPT TNLNR + Q++SS ASL+F G LNV
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNV 250
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 295 bits (724), Expect = 3e-80
Identities = 131/170 (77%), Positives = 147/170 (86%)
Frame = +3
Query: 177 HVGQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGKHVPRAVF 356
H+GQAG+Q+GN+CW LYCLEHGIQPDG MP+D +G D+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVF 67
Query: 357 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 536
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 537 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQV
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV 177
Score = 87.0 bits (206), Expect = 2e-17
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLNV 903
LEH+D A ++DNEAIYDICRR+LDIERPT TNLNR I QI+SS SL+F G +NV
Sbjct: 195 LEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINV 250
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 295 bits (724), Expect = 3e-80
Identities = 131/170 (77%), Positives = 147/170 (86%)
Frame = +3
Query: 177 HVGQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGKHVPRAVF 356
H+GQAG+Q+GN+CW LYCLEHGIQPDG MP+D +G D+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVF 67
Query: 357 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 536
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 537 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQV
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV 177
Score = 87.0 bits (206), Expect = 2e-17
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLNV 903
LEH+D A ++DNEAIYDICRR+LDIERPT TNLNR I QI+SS SL+F G +NV
Sbjct: 195 LEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINV 250
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 282 bits (691), Expect = 3e-76
Identities = 123/170 (72%), Positives = 145/170 (85%)
Frame = +3
Query: 177 HVGQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGKHVPRAVF 356
H+GQAG+Q+GN+CW LYCLEHGIQPDG MP+D +G D+FNTFFSET +G+HVPRAVF
Sbjct: 8 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVF 67
Query: 357 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 536
+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+R+RKLAD
Sbjct: 68 LDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLAD 127
Query: 537 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
CTGLQGFL+F+ LL+ERLSVD+GKKSKL F IYP+PQV
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQV 177
Score = 81.8 bits (193), Expect = 6e-16
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLNV 903
LEH+D ++DNEAIYDICRR+LDIERPT +NLNR I Q +SS SL+F G +NV
Sbjct: 195 LEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINV 250
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 147 bits (357), Expect = 8e-36
Identities = 66/177 (37%), Positives = 105/177 (59%), Gaps = 2/177 (1%)
Frame = +3
Query: 162 LHSLXHV--GQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGK 335
+ + H+ GQ G Q+G+ W + C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQ--LERVNVYYNEASCGR 58
Query: 336 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 515
+VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 516 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+V
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLN 900
+E++D ++DNEA+YDIC R L + P+ +LN I +S L+F G LN
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 247
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 146 bits (354), Expect = 2e-35
Identities = 66/177 (37%), Positives = 104/177 (58%), Gaps = 2/177 (1%)
Frame = +3
Query: 162 LHSLXHV--GQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGK 335
+ + HV GQ G Q+G+ W + C EHG+ P G+ D + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 336 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 515
+VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 516 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+V
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 176
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLN 900
+E++D ++DNEA+YDIC R L + P+ +LN I +S SL+F G LN
Sbjct: 194 VENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLN 248
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 145 bits (351), Expect = 4e-35
Identities = 66/177 (37%), Positives = 102/177 (57%), Gaps = 2/177 (1%)
Frame = +3
Query: 162 LHSLXHV--GQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGK 335
+ + H+ GQ G Q+G W + C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQ--LERINVYYNEASCGR 58
Query: 336 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 515
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 516 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+V
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLN 900
+E++D ++DNEA+YDIC R L + P+ +LN I +S L+F G LN
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 247
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 145 bits (351), Expect = 4e-35
Identities = 66/177 (37%), Positives = 102/177 (57%), Gaps = 2/177 (1%)
Frame = +3
Query: 162 LHSLXHV--GQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGK 335
+ + H+ GQ G Q+G W + C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQ--LERINVYYNEASCGR 58
Query: 336 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 515
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 516 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+V
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLN 900
+E++D ++DNEA+YDIC R L + P+ +LN I +S L+F G LN
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 247
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 143 bits (347), Expect = 1e-34
Identities = 66/177 (37%), Positives = 103/177 (58%), Gaps = 2/177 (1%)
Frame = +3
Query: 162 LHSLXHV--GQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGK 335
+ + H+ GQ G Q+G W + C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQ--LERINVYFNEASGGK 58
Query: 336 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 515
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 516 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
+RK A+ C LQGF + H LL+ ++ +Y + + F+++P+P+V
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKV 175
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLN 900
+E++D ++DNEA+YDIC R L + PT +LN I +S L+F G LN
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLN 247
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 142 bits (344), Expect = 3e-34
Identities = 65/177 (36%), Positives = 102/177 (57%), Gaps = 2/177 (1%)
Frame = +3
Query: 162 LHSLXHV--GQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGK 335
+ + H+ GQ G Q+G W + C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQ--LERVNVYYNEASCGR 58
Query: 336 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 515
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 516 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+V
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLN 900
+E++D ++DNEA+YDIC R L + P+ +LN I +S L+F G LN
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLN 247
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 142 bits (344), Expect = 3e-34
Identities = 65/177 (36%), Positives = 104/177 (58%), Gaps = 2/177 (1%)
Frame = +3
Query: 162 LHSLXHV--GQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGK 335
+ + H+ GQ G Q+G+ W + LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQ--LERVNVYYNEASCGR 58
Query: 336 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 515
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 516 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
+RK A+ C LQGF + H LL+ ++ +Y + + F+++P+P+V
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKV 175
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLN 900
+E++D ++DNEA+YDIC R L + P+ +LN I +S L+F G LN
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLN 247
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 141 bits (342), Expect = 5e-34
Identities = 64/177 (36%), Positives = 103/177 (58%), Gaps = 2/177 (1%)
Frame = +3
Query: 162 LHSLXHV--GQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGK 335
+ + H+ GQ G Q+G+ W + C EHGI G+ D + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTA-DLQLERINVYYNEASGGR 59
Query: 336 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 515
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 516 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+V
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 176
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLN 900
+E++D ++DNEA+YDIC R L + P+ +LN I +S SL+F G LN
Sbjct: 194 VENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLN 248
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 138 bits (333), Expect = 6e-33
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 2/177 (1%)
Frame = +3
Query: 162 LHSLXHV--GQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGK 335
+ + H+ GQ G Q+G W + C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQ--LERIDVYFNEASGGK 58
Query: 336 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 515
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 516 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 686
+RK A+ LQGF + H LL+ ++ +Y + + F+++P+P+V
Sbjct: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKV 175
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 736 LEHSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLN 900
+E++D ++DNEA+YDIC R L + PT +LN I +S L+F G LN
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLN 247
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 102 bits (244), Expect = 4e-22
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Frame = +3
Query: 180 VGQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGKHVPRAVFV 359
VGQ G Q+G W CLEHGI DG + GG D + FF + ++PRA+ +
Sbjct: 10 VGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLI 67
Query: 360 DLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLA 533
DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I + A
Sbjct: 68 DLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREA 126
Query: 534 DQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 674
D L+GF++ H L+E L+ Y KK ++++P
Sbjct: 127 DGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
Score = 35.9 bits (79), Expect = 0.037
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 742 HSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLN 900
++DC ++DN A+ I L + PT N + ++S+ +L++ G +N
Sbjct: 198 NADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMN 250
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 101 bits (243), Expect = 5e-22
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Frame = +3
Query: 180 VGQAGVQLGNACWXLYCLEHGIQPDGQMPTDKXIGGGXDSFNTFFSETGAGKHVPRAVFV 359
VGQ G Q+G W CLEHGI DG + GG D + FF + ++PRA+ +
Sbjct: 10 VGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLI 67
Query: 360 DLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLA 533
DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I + A
Sbjct: 68 DLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREA 126
Query: 534 DQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 674
D L+GF++ H L+E L+ Y KK ++++P
Sbjct: 127 DGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
Score = 36.3 bits (80), Expect = 0.028
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 742 HSDCAFMVDNEAIYDICRRNLDIERPTXTNLNRFIGQIVSSXXASLKFXGPLN 900
++DC ++DN A+ I L + PT N + ++S+ +L++ G +N
Sbjct: 198 NADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMN 250
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -2
Query: 593 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 414
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 413 QLSVCASADLINNSR---FKIDEDSTGYVLASSGLAEESVERIXSTPD 279
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At5g16280.1 68418.m01901 expressed protein
Length = 1265
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 111 FILHLSIVNKLKSKCVALHSLXHVG 185
F++ + IVN+ KS C +H L VG
Sbjct: 943 FLVRMDIVNRAKSDCFQIHQLSTVG 967
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 28.7 bits (61), Expect = 5.6
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +3
Query: 222 LYCLEHGIQP--DGQMPT-DKXIGGGXDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 389
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 390 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 518
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 28.7 bits (61), Expect = 5.6
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +3
Query: 222 LYCLEHGIQP--DGQMPT-DKXIGGGXDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 389
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 390 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 518
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 28.7 bits (61), Expect = 5.6
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +3
Query: 222 LYCLEHGIQP--DGQMPT-DKXIGGGXDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 389
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 390 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 518
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g12730.1 68416.m01590 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 235
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 625 SPLTTARSLNWSSPSTPRLRFHCRRRALQXYPHXPHNLEHSDCAFMVDNEAIYDICRRN 801
+P T R + + L+ H ++ L PH H+ HS C + ++ D+ RRN
Sbjct: 50 TPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEHSQNHSICIRDTNRASMLDL-RRN 107
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,104,301
Number of Sequences: 28952
Number of extensions: 370242
Number of successful extensions: 978
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2129873112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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