Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D06
(885 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 83 7e-15
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ... 69 2e-10
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus... 66 8e-10
UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular o... 44 0.007
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka... 42 0.028
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037... 40 0.11
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/... 38 0.34
UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;... 37 0.79
UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostel... 36 1.8
UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117... 35 2.4
UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|R... 33 7.3
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 33 7.3
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 83.4 bits (197), Expect = 7e-15
Identities = 41/68 (60%), Positives = 45/68 (66%)
Frame = +3
Query: 633 SKLKIAXXXXXXXXXXXXXXXXPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEP 812
+KLKIA PV KALK Q+KVVKGEHGKRVRKIR SVHFRRPK FEP
Sbjct: 129 AKLKIAPKPKKTGIKGQKKVVKPVVKALKIQKKVVKGEHGKRVRKIRTSVHFRRPKTFEP 188
Query: 813 PXHP*IPK 836
P +P P+
Sbjct: 189 PRNPKYPR 196
Score = 41.1 bits (92), Expect = 0.036
Identities = 21/44 (47%), Positives = 23/44 (52%)
Frame = +1
Query: 751 GREYGKFATLCISADPRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
G+ K T P+ KYP KSLP RNRMDAYNII
Sbjct: 168 GKRVRKIRTSVHFRRPKTFEPPRNPKYPRKSLPKRNRMDAYNII 211
>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ribosomal protein L23Ae - Nasonia vitripennis
Length = 247
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +3
Query: 699 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
PV KALKAQ+K++KG G RVRKIR SVHF RPK F PP +P P+
Sbjct: 108 PVQKALKAQKKILKGVQGSRVRKIRTSVHFHRPKTFRPPRNPKYPR 153
Score = 35.5 bits (78), Expect = 1.8
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +1
Query: 826 KYPXKSLPXRNRMDAYNII 882
KYP KS+P RNRMDA NII
Sbjct: 150 KYPRKSVPNRNRMDAVNII 168
>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
cervinus|Rep: Ribosomal protein L23Ae - Dascillus
cervinus
Length = 212
Score = 66.5 bits (155), Expect = 8e-10
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +3
Query: 699 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
PV KAL Q+KV+KG G R RKIRNSVHF RPK F PP +P P+
Sbjct: 141 PVQKALNVQKKVIKGPFGTRARKIRNSVHFHRPKTFRPPRNPKYPR 186
Score = 36.7 bits (81), Expect = 0.79
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 826 KYPXKSLPXRNRMDAYNII 882
KYP KS+P R+RMDAYNII
Sbjct: 183 KYPRKSVPTRSRMDAYNII 201
>UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular
organisms|Rep: Ribosomal protein L23a - Taenia asiatica
(Asian tapeworm)
Length = 204
Score = 43.6 bits (98), Expect = 0.007
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 702 VTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP 824
V +ALKAQ+ + G H K +K+ ++ FRRPK + PP P
Sbjct: 66 VARALKAQKAINIGAHTKGKKKVMKNIRFRRPKTYRPPRCP 106
>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
(Human)
Length = 156
Score = 41.5 bits (93), Expect = 0.028
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
KALKA++ V+KG H + +KIR S FRRPK P P+
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPR 62
Score = 34.3 bits (75), Expect = 4.2
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L KYP KS P RN++D Y II
Sbjct: 49 PKTLRLRRQPKYPRKSAPRRNKLDHYAII 77
>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000339037 - Homo sapiens (Human)
Length = 156
Score = 39.5 bits (88), Expect = 0.11
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IP 833
KALKA++ V+KG H + +KI S FRRPK + P P
Sbjct: 20 KALKAKKAVLKGVHNHKKKKIHTSPTFRRPKTLQLRRQPKYP 61
Score = 34.3 bits (75), Expect = 4.2
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L KYP KS P RN++D Y II
Sbjct: 49 PKTLQLRRQPKYPWKSTPRRNKLDHYAII 77
>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 142
Score = 37.9 bits (84), Expect = 0.34
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 699 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPK 800
P KA A++ VVKG +GK+ K+R S FR PK
Sbjct: 3 PSAKATAAKKAVVKGTNGKKALKVRTSATFRLPK 36
>UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 109
Score = 36.7 bits (81), Expect = 0.79
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 711 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP 824
ALK ++ ++G H R RKI V FRRPK ++ P
Sbjct: 43 ALKTKKAALRGTHATRKRKIHTKVTFRRPKTYKAARVP 80
>UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L23a -
Dictyostelium discoideum AX4
Length = 169
Score = 35.5 bits (78), Expect = 1.8
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
KA A V KG K RK+R SV FRRP P P P+
Sbjct: 33 KAKAAASAVKKGVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPR 75
>UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117;
n=5; Eutheria|Rep: Uncharacterized protein
ENSP00000332117 - Homo sapiens (Human)
Length = 156
Score = 35.1 bits (77), Expect = 2.4
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IP 833
KALKA++ +KG H +K R S+ F+RPK P P
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYP 61
>UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|Rep:
Ribosomal protein L23 - Spinacia oleracea (Spinach)
Length = 155
Score = 33.5 bits (73), Expect = 7.3
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +3
Query: 699 PVTKALKAQRKVVKGEH---GKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
P +ALKA + V G + K +KIR V F RPK F+ +P P+
Sbjct: 13 PKAQALKAAKAVKSGSNILKKKASKKIRTKVTFHRPKTFKKERNPKYPR 61
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 33.5 bits (73), Expect = 7.3
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRV--RKIRNSVHFRRPKXFEPPXHP*IPK 836
+ALKAQ+ ++ HG RV +KIR +VHF RPK P P+
Sbjct: 6 QALKAQKAIL---HGTRVEAKKIRTNVHFFRPKTLVHKKAPLYPR 47
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,167,216
Number of Sequences: 1657284
Number of extensions: 5655781
Number of successful extensions: 13933
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13929
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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