Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D06
         (885 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_57676| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.033
SB_20380| Best HMM Match : Lipase_GDSL (HMM E-Value=0.24)              29   3.8  

>SB_57676| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +3

Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
           KA KA++ V KG    + +K+R SV F RPK      +P  P+
Sbjct: 138 KAQKAKKAVQKGVRAAKTKKVRTSVKFHRPKTLSLRRNPKYPR 180


>SB_20380| Best HMM Match : Lipase_GDSL (HMM E-Value=0.24)
          Length = 416

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 590 CGNSSQNCQTQASSFQIEDCTEAQKDWD*GTKKSSETCY*ST*GSEEGCK 739
           CGN + NC  +A +   E  +    DW       +ETC      SEE C+
Sbjct: 129 CGNGTSNCNCEACTDFSEVISAELYDW----VPQNETCVVKNYSSEEACR 174


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,641,833
Number of Sequences: 59808
Number of extensions: 177337
Number of successful extensions: 410
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2526446612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)