Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D06
(885 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 42 0.002
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 42 0.002
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 42 0.002
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 42 0.002
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 42 0.004
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 42 0.004
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 42 0.004
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 42 0.004
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 42 0.004
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 42 0.004
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 42 0.004
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 35 0.34
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 30 9.7
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 30 9.7
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPK---XFEPPXHP 824
KALKA++ V+KG HG + +KIR S F+RPK + PP +P
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYP 61
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L +YP K+ P RN++D Y II
Sbjct: 49 PKTLRLWRPPRYPRKTTPRRNKLDHYAII 77
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPK---XFEPPXHP 824
KALKA++ V+KG HG + +KIR S F+RPK + PP +P
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYP 61
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L +YP K+ P RN++D Y II
Sbjct: 49 PKTLRLWRPPRYPRKTTPRRNKLDHYAII 77
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPK---XFEPPXHP 824
KALKA++ V+KG HG + +KIR S F+RPK + PP +P
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYP 61
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L +YP K+ P RN++D Y II
Sbjct: 49 PKTLRLWRPPRYPRKTTPRRNKLDHYAII 77
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPK---XFEPPXHP 824
KALKA++ V+KG HG + +KIR S F+RPK + PP +P
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYP 61
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L +YP K+ P RN++D Y II
Sbjct: 49 PKTLRLWRPPRYPRKTTPRRNKLDHYAII 77
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 41.5 bits (93), Expect = 0.004
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
KALKA++ V+KG H + +KIR S FRRPK P P+
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPR 62
Score = 34.3 bits (75), Expect = 0.60
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L KYP KS P RN++D Y II
Sbjct: 49 PKTLRLRRQPKYPRKSAPRRNKLDHYAII 77
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 41.5 bits (93), Expect = 0.004
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
KALKA++ V+KG H + +KIR S FRRPK P P+
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPR 62
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNIIN 885
P+ L L KYP KS P RN++D Y IIN
Sbjct: 49 PKTLRLRRQPKYPRKSAPRRNKLDHYAIIN 78
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 41.5 bits (93), Expect = 0.004
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
KALKA++ V+KG H + +KIR S FRRPK P P+
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPR 62
Score = 34.3 bits (75), Expect = 0.60
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L KYP KS P RN++D Y II
Sbjct: 49 PKTLRLRRQPKYPRKSAPRRNKLDHYAII 77
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 41.5 bits (93), Expect = 0.004
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
KALKA++ V+KG H + +KIR S FRRPK P P+
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPR 53
Score = 34.3 bits (75), Expect = 0.60
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L KYP KS P RN++D Y II
Sbjct: 40 PKTLRLRRQPKYPRKSAPRRNKLDHYAII 68
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 41.5 bits (93), Expect = 0.004
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
KALKA++ V+KG H + +KIR S FRRPK P P+
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPR 62
Score = 34.3 bits (75), Expect = 0.60
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L KYP KS P RN++D Y II
Sbjct: 49 PKTLRLRRQPKYPRKSAPRRNKLDHYAII 77
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 41.5 bits (93), Expect = 0.004
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
KALKA++ V+KG H + +KIR S FRRPK P P+
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPR 62
Score = 34.3 bits (75), Expect = 0.60
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L KYP KS P RN++D Y II
Sbjct: 49 PKTLRLRRQPKYPRKSAPRRNKLDHYAII 77
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 41.5 bits (93), Expect = 0.004
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
KALKA++ V+KG H + +KIR S FRRPK P P+
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPR 62
Score = 34.3 bits (75), Expect = 0.60
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L KYP KS P RN++D Y II
Sbjct: 49 PKTLRLRRQPKYPRKSAPRRNKLDHYAII 77
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 35.1 bits (77), Expect = 0.34
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 708 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IP 833
KALKA++ +KG H +K R S+ F+RPK P P
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYP 61
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L +YP KS P RN++ Y II
Sbjct: 8 PKTLRLRRQPRYPQKSTPRRNKLGHYAII 36
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
P+ L L +YP KS P RN++ Y II
Sbjct: 8 PKTLRLRRQPRYPRKSTPRRNKLGHYAII 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,958,491
Number of Sequences: 237096
Number of extensions: 947898
Number of successful extensions: 1738
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -