Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_D06
         (885 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    49   1e-05
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    49   1e-05
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...    48   2e-05
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...    42   9e-04
BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p pro...    31   2.8  
AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA...    31   2.8  

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score = 48.8 bits (111), Expect = 1e-05
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = +3

Query: 711 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
           A K Q+K++KG  G R RKIR +VHFRRP   + P  P  P+
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPR 175



 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +1

Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
           P  L L  + KYP KS+P RNRMDAYNII
Sbjct: 162 PTTLKLPRSPKYPRKSVPTRNRMDAYNII 190


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score = 48.8 bits (111), Expect = 1e-05
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = +3

Query: 711 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
           A K Q+K++KG  G R RKIR +VHFRRP   + P  P  P+
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPR 183



 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +1

Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
           P  L L  + KYP KS+P RNRMDAYNII
Sbjct: 170 PTTLKLPRSPKYPRKSVPTRNRMDAYNII 198


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = +3

Query: 711 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
           A K Q+K++KG  G R RKIR +VHFRRP   + P  P  P+
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPR 183



 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +1

Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
           P  L L  + KYP KS+P RNRMDAYNII
Sbjct: 170 PTTLKLPRSPKYPRKSVPTRNRMDAYNII 198


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = +3

Query: 711 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKXFEPPXHP*IPK 836
           A K Q+K++K   G R RKIR +VHFRRP   + P  P  P+
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPR 175



 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +1

Query: 796 PRXLNLLXTXKYPXKSLPXRNRMDAYNII 882
           P  L L  + KYP KS+P RNRMDAYNII
Sbjct: 162 PTTLKLPRSPKYPRKSVPTRNRMDAYNII 190


>BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 749 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 657
           M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


>AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 749 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 657
           M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,674,904
Number of Sequences: 53049
Number of extensions: 268848
Number of successful extensions: 688
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)