Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D05
(879 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa... 352 8e-96
UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologu... 258 2e-67
UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n... 245 1e-63
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa... 244 3e-63
UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, wh... 158 2e-37
UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lambl... 125 1e-27
UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n... 101 2e-20
UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n... 91 3e-17
UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1; Tricho... 83 1e-14
UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPa... 69 1e-10
UniRef50_A2FWK7 Cluster: ATPase, AAA family protein; n=1; Tricho... 68 4e-10
UniRef50_A3CXI0 Cluster: AAA family ATPase, CDC48 subfamily; n=3... 55 3e-06
UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putativ... 53 8e-06
UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase, put... 53 8e-06
UniRef50_A3H629 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 52 2e-05
UniRef50_Q8THE2 Cluster: Cell division control protein 48; n=7; ... 51 4e-05
UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue, put... 50 8e-05
UniRef50_Q0W6B6 Cluster: Putative cell division cycle protein 48... 48 3e-04
UniRef50_Q5CJ12 Cluster: Putative uncharacterized protein; n=2; ... 47 7e-04
UniRef50_Q2RI39 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 46 0.001
UniRef50_Q58556 Cluster: Cell division cycle protein 48 homolog ... 46 0.002
UniRef50_Q74M89 Cluster: NEQ475; n=1; Nanoarchaeum equitans|Rep:... 45 0.003
UniRef50_A0RUY9 Cluster: AAA ATPase; n=2; Thermoprotei|Rep: AAA ... 44 0.004
UniRef50_Q9HPU1 Cluster: Cell division cycle protein; n=5; Eurya... 44 0.005
UniRef50_Q2FMV5 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 43 0.012
UniRef50_Q9UYZ7 Cluster: ATPase of the AAA+ family; n=12; Euryar... 42 0.016
UniRef50_A2SR43 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 42 0.021
UniRef50_A1HPK1 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 42 0.027
UniRef50_Q8PZP5 Cluster: Cell division control protein; n=4; Eur... 40 0.063
UniRef50_Q7QTA1 Cluster: GLP_15_26945_31573; n=3; root|Rep: GLP_... 38 0.34
UniRef50_A2QZY1 Cluster: Remark: Cdc48p of S. cerevisiae is more... 38 0.34
UniRef50_Q1GSQ3 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 38 0.44
UniRef50_Q8TY20 Cluster: ATPase of the AAA+ class; n=1; Methanop... 37 0.78
UniRef50_Q653E3 Cluster: Putative 26S protease regulatory subuni... 36 1.0
UniRef50_A5K794 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_A4YMQ0 Cluster: Putative Vesicle-fusing ATPase; n=1; Br... 36 1.4
UniRef50_A4YDZ5 Cluster: Vesicle-fusing ATPase; n=2; Sulfolobace... 36 1.8
UniRef50_P35998 Cluster: 26S protease regulatory subunit 7; n=13... 36 1.8
UniRef50_Q9AW43 Cluster: 26S proteasome AAA-ATPase subunit; n=1;... 35 2.4
UniRef50_Q7QYT8 Cluster: GLP_70_13103_11571; n=1; Giardia lambli... 35 3.1
UniRef50_Q6N2G6 Cluster: AAA ATPase; n=2; Rhodopseudomonas palus... 34 4.1
UniRef50_A7BC87 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q7RTI8 Cluster: Putative uncharacterized protein PY0000... 34 5.5
UniRef50_UPI0001555990 Cluster: PREDICTED: similar to spermatoge... 33 7.2
UniRef50_Q7R4L3 Cluster: GLP_49_27747_26542; n=1; Giardia lambli... 33 9.6
UniRef50_Q5V0R7 Cluster: Cell division cycle protein 48; n=1; Ha... 33 9.6
>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
sapiens (Human)
Length = 806
Score = 352 bits (865), Expect = 8e-96
Identities = 159/205 (77%), Positives = 182/205 (88%)
Frame = +3
Query: 225 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 404
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 405 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 584
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 585 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 764
F+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 765 NAVGYDDIGGCRKQLAQIKEMVELP 839
N VGYDDIGGCRKQLAQIKEMVELP
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELP 223
>UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologue,
putative; n=4; Plasmodium|Rep: Cell division cycle
protein 48 homologue, putative - Plasmodium chabaudi
Length = 250
Score = 258 bits (631), Expect = 2e-67
Identities = 114/200 (57%), Positives = 155/200 (77%), Gaps = 1/200 (0%)
Frame = +3
Query: 243 RLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRM 422
RLIVEEA +DDNSVVAL+ +ME+L FRGDT+L+KGK+R T+CI+L+D++ + KIR+
Sbjct: 26 RLIVEEATNDDNSVVALNTKRMEELNFFRGDTILIKGKKRHSTICIILNDNDLDEGKIRI 85
Query: 423 XXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLT-GNLFEVYLKPYFMEAY 599
D+V + CP + YGK++ +LPIDD++EGL LFE++LKPYF E+Y
Sbjct: 86 NKVARKNLRVCLGDIVYVKACPEIPYGKKIQVLPIDDTIEGLAKDTLFEIFLKPYFNESY 145
Query: 600 RPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGY 779
RP+ + D F+VRGG +VEFKVVE DP FCIV+PDTVI+ +G+PIKR++EE+ L+ +GY
Sbjct: 146 RPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEEK-LDEIGY 204
Query: 780 DDIGGCRKQLAQIKEMVELP 839
DDIGGC+KQLAQI+EM+ELP
Sbjct: 205 DDIGGCKKQLAQIREMIELP 224
>UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
valosin - Strongylocentrotus purpuratus
Length = 596
Score = 245 bits (599), Expect = 1e-63
Identities = 125/204 (61%), Positives = 151/204 (74%)
Frame = +3
Query: 228 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 407
K +PNRL+VEEA++DDNSVV+LSQAKM++LQLFRGDTV+LKGK+R++TVCIVLSDD D
Sbjct: 17 KAKPNRLVVEEAINDDNSVVSLSQAKMDELQLFRGDTVMLKGKKRRDTVCIVLSDDTVTD 76
Query: 408 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 587
+KIR+ V+ RV + D V L F+VYL+PYF
Sbjct: 77 DKIRVNRV--------------------VRSNLRVR---LGDIVRNL----FDVYLRPYF 109
Query: 588 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALN 767
EAYRP+ + D F +RGGMRAVEFKVVETDP P+CIV+PDTVIH +G+ IKRE+EEE LN
Sbjct: 110 QEAYRPVRKGDIFQIRGGMRAVEFKVVETDPGPYCIVSPDTVIHFEGDAIKREDEEENLN 169
Query: 768 AVGYDDIGGCRKQLAQIKEMVELP 839
+GYDDIGGCRKQLA IKEMVELP
Sbjct: 170 EIGYDDIGGCRKQLASIKEMVELP 193
>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
putative; n=2; Leishmania|Rep: Transitional endoplasmic
reticulum ATPase, putative - Leishmania infantum
Length = 690
Score = 244 bits (596), Expect = 3e-63
Identities = 109/187 (58%), Positives = 141/187 (75%)
Frame = +3
Query: 228 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 407
K + N+LIVEE +DDNSVV+L+ +ME+L +FRGDTVL+KGK+ + TVCI + DD CP
Sbjct: 11 KVKLNKLIVEEPYNDDNSVVSLNPKRMEELNIFRGDTVLVKGKKHRSTVCIAMEDDECPP 70
Query: 408 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 587
EKI+M D + I PC V YG RVH+LPIDD+VE LTG+LFE +LKPYF
Sbjct: 71 EKIKMNKVARRNIRIHLGDTIRIVPCKDVPYGNRVHLLPIDDTVENLTGDLFENFLKPYF 130
Query: 588 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALN 767
+E+YRP+ + D+F+ RG MR+VEFKVVE DP +CIV+PDT+IH +G+PI R E+EEAL+
Sbjct: 131 LESYRPVKKGDSFVCRGAMRSVEFKVVEVDPGDYCIVSPDTIIHSEGDPIHR-EDEEALD 189
Query: 768 AVGYDDI 788
VGYDDI
Sbjct: 190 GVGYDDI 196
>UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 772
Score = 158 bits (383), Expect = 2e-37
Identities = 86/212 (40%), Positives = 126/212 (59%), Gaps = 3/212 (1%)
Frame = +3
Query: 210 PRSSXRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLS 389
P++ NRL+V E+ +DDNSVV L Q K+ +L+LF+GD VLL+GK K+TV I +S
Sbjct: 7 PKNKIPAKMNNRLMVCESTADDNSVVQLCQDKLNELKLFKGDMVLLEGKNNKKTVAIAIS 66
Query: 390 DDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLT-GNLFE 566
+ E + M D ++I P S+ +VHILP DS+ G NL +
Sbjct: 67 NRQ-DKESVHMNSVIRKNLGIQIGDFITIQPTASLPQLTKVHILPFQDSISGTNEKNLTQ 125
Query: 567 VYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKRE 746
YL PYF++AYRP+ + D F+V+ + +EFK++ T+P +V P T+++ +G +KRE
Sbjct: 126 NYLIPYFLDAYRPVSKGDCFVVKMA-KEIEFKIIATEPEDMGVVGPITILYTEGGTVKRE 184
Query: 747 EE--EEALNAVGYDDIGGCRKQLAQIKEMVEL 836
E E+ N GY +IGG KQL IK +VEL
Sbjct: 185 IENKEQFDNQNGYANIGGMNKQLTIIKTIVEL 216
>UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_762_31096_33708 - Giardia lamblia
ATCC 50803
Length = 870
Score = 125 bits (302), Expect = 1e-27
Identities = 79/227 (34%), Positives = 112/227 (49%), Gaps = 27/227 (11%)
Frame = +3
Query: 240 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIR 419
NR IV + D+S + LS K+ L LF+GD V LKG+ K T +V S ++ +
Sbjct: 12 NRFIVNDNPGGDDSQIILSSEKVNVLDLFQGDYVRLKGRFGKTTHAMVQSREDVDKIVVL 71
Query: 420 MXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL----------------- 548
M D+V + P ++ Y KR+ ++P + +EGL
Sbjct: 72 MNKTMRANLGVNLGDIVILYPAQNLPYHKRIKVIPFEQDLEGLNIAGYTVKQGEDGKPAP 131
Query: 549 ------TGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGM----RAVEFKVVETDPSPFCIV 698
T +LF++ + PYF + RP+ +TF V R +EFKVV TDPSP CIV
Sbjct: 132 APFPGPTYDLFDICIAPYFKDKCRPVTEGNTFKVMTTSLPVNREIEFKVVLTDPSPACIV 191
Query: 699 APDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
I +GEPI R+E E VGY D+GG K+L I+E +ELP
Sbjct: 192 MDGGEIFYEGEPIDRDEHERENTKVGYSDLGGLGKELGMIREQIELP 238
>UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n=3;
Plasmodium (Vinckeia)|Rep: Cell division cycle ATPase,
putative - Plasmodium berghei
Length = 932
Score = 101 bits (243), Expect = 2e-20
Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 7/208 (3%)
Frame = +3
Query: 237 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEK 413
PN +VE + DN + +S+ KM++L + G TVLLKGK++KE V IV D+
Sbjct: 101 PNYCLVENIDENADNFDIYMSKEKMKELNINDGFTVLLKGKKKKEMVAIVREDNRLNKYS 160
Query: 414 IRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFE-VYLKPYFM 590
+ + +D++ I P ++K K V + P +D+V +T E L Y
Sbjct: 161 VSISFSIKRNLRLMHNDIIKIYPLSNIKNIKNVILSPFNDTVNNITKQEIEKEILNTYLK 220
Query: 591 EAYRPIHRDDTFMVRGGMRAVEFKVVE--TD---PSPFCIVAPDTVIHCDGEPIKREEEE 755
+Y+P+ D+T + + +E KV++ TD + + I+ + RE+ E
Sbjct: 221 NSYKPLSVDNTIYINYKNKRIELKVLKLITDDGQSEQHGCLTNTSHINLSETFLNREDYE 280
Query: 756 EALNAVGYDDIGGCRKQLAQIKEMVELP 839
E + + Y+D+GG +KQL +I+E++ELP
Sbjct: 281 ENTDDINYEDLGGMKKQLNKIRELIELP 308
>UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n=1;
Plasmodium vivax|Rep: Cell division cycle ATPase,
putative - Plasmodium vivax
Length = 1089
Score = 91.5 bits (217), Expect = 3e-17
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Frame = +3
Query: 237 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEK 413
P+ +VE DN + LS+AKME+L L G TVLLKGK++KE + I D
Sbjct: 270 PSYCLVENVDEQIDNCEIYLSKAKMEELNLSEGFTVLLKGKKKKEMLAIAKLDRRLQKHF 329
Query: 414 IRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLT-GNLFEVYLKPYFM 590
+ + +D++ I P V + V + P D+V GL+ L + L+PY
Sbjct: 330 VVISFAMKKNLRLMHNDIIKIFPLMKVHPLRTVVLSPFSDTVGGLSKAELEQEVLRPYLK 389
Query: 591 EAYRPIHRDDTFMVRGGMRAVEFKVV------------ETDP-----------SPFCIVA 701
++P+ + R VEF+VV E P + V
Sbjct: 390 GTFKPLCEGTNVYIPHKGRKVEFRVVKLVKEGEEAARKEEQPLRESRADVPTSQHYGYVG 449
Query: 702 PDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
+ +I D E + RE+ EE + + Y+D+GG +KQL +I+E++ELP
Sbjct: 450 DNAIITLDEEYLNREDYEEHTDDITYEDLGGMKKQLNKIRELIELP 495
>UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 1041
Score = 82.6 bits (195), Expect = 1e-14
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Frame = +3
Query: 237 PNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVL--SDDNCPDE 410
P+ V++ D +V +S KM QL G V +K + KE++ + L S + CP
Sbjct: 4 PSAFFVDQCQKDGFNVF-MSPEKMAQLSFREGQVVRIK-TQSKESILVKLYSSKEECPIA 61
Query: 411 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 590
I++ V + V V I + ++++G+ G++ ++ +
Sbjct: 62 NIQIPRAVRNNIHCFLGQTVVVEAAEKVAKADDVIISAVSETIDGIDGSIIDLLYASNYD 121
Query: 591 EAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNA 770
PI RD V R +EFKVV P I+ VI +PI RE +
Sbjct: 122 FVGMPIRRDQIIPVYALNRVIEFKVVNCSPEEEVIIQDKEVILYRNQPIHRENIN--FST 179
Query: 771 VGYDDIGGCRKQLAQIKEMVELP 839
V YD IGG KQ+ QI++++E P
Sbjct: 180 VSYDSIGGLHKQIDQIRKLIEFP 202
>UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPase;
n=1; Toxoplasma gondii|Rep: Transitional endoplasmic
reticulum ATPase - Toxoplasma gondii
Length = 792
Score = 69.3 bits (162), Expect = 1e-10
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 41/219 (18%)
Frame = +3
Query: 306 MEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPC 485
M LQ+ RGD VLL G+R++ETV I + D + + + D + + P
Sbjct: 1 MAALQVQRGDVVLLSGRRKRETVAIAMPDRSLEARHVVLHAHALKNIKLHAQDAIKVTPQ 60
Query: 486 PSVKYGKRVHILPIDDSV----EGLTGN-------------LFEVYLKPYFMEAYRPIHR 614
+ + +RV +LP D++ +G G E +F RP+
Sbjct: 61 RLLPHARRVFVLPFSDTLGDVRDGGAGRSEGRDRDAPGEKPSVEAVATKFFRHTSRPVKL 120
Query: 615 DDTFMV---------RGGMRAVEFKVVE-----TDPSPFCIVAPDTVIHCDGEPIKR--- 743
D F++ G VE KV++ D +V T + C+GEP+ R
Sbjct: 121 GDQFVLEFPVHAKGEHGATGKVEVKVMQIDTDGKDDQEVALVDDATELICEGEPLDRAVI 180
Query: 744 -------EEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
+ +A + + YDD+GG +K+L I+E+VELP
Sbjct: 181 FCVAPLPSAQFDASSMITYDDVGGLKKELNLIRELVELP 219
>UniRef50_A2FWK7 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 2005
Score = 67.7 bits (158), Expect = 4e-10
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Frame = +3
Query: 258 EAVSDDNSVVA-LSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXX 434
+ V D N + A +S M L + G V ++ ++ +T+ + D PD IR+
Sbjct: 9 DKVDDFNDLNAYISNKAMNALGISDGSVVSVRNQQNSQTLVAIQGCD-MPDNVIRLSRCH 67
Query: 435 XXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHR 614
+ V I+ + + V + PI D++ G++GN ++ + + P++
Sbjct: 68 RINIGSFLGETVKISKPIKSQKAEIVLVAPIADTINGISGNFCDLIQESSYKFNNFPVYP 127
Query: 615 DDTFMVRGGMRAVEFKVVETDPS-PFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIG 791
+ F V R VEF+V++ PS IV V +P+ R + + YDDIG
Sbjct: 128 NFIFPVYTMQRVVEFQVIKCSPSGAHVIVTSADVFSSRSQPVNRTGQPH-FEGITYDDIG 186
Query: 792 GCRKQLAQIKEMVELP 839
G L +++ +E P
Sbjct: 187 GIDSSLKKVRTSIERP 202
>UniRef50_A3CXI0 Cluster: AAA family ATPase, CDC48 subfamily; n=3;
Methanomicrobiales|Rep: AAA family ATPase, CDC48
subfamily - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 805
Score = 54.8 bits (126), Expect = 3e-06
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 7/205 (3%)
Frame = +3
Query: 246 LIVEEAVSDDNSV--VALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIR 419
L V+ A +D L M QL+L GD V ++GKRR ++ K+R
Sbjct: 6 LKVDSAYPEDQGAGKARLDPDTMLQLRLNPGDLVAIEGKRRTVAKVWRAMVNDWHQSKVR 65
Query: 420 MXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAY 599
+ D V I K V + P +D + L N V K
Sbjct: 66 IDNFTRLNTGASIGDRVKIRTLDEEAEAKLVVLAPPEDLPKQLPINYGSVVNKLIDF--- 122
Query: 600 RPIHRDDTFMVRGGM-----RAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 764
P+ ++D+ ++ G+ + V FK V +P I+ +T I +P E +
Sbjct: 123 -PVVKNDSVPIQAGLPFMQPQLVAFKAVVVEPENAVIITKNTKIEFSEKPAAGFE---GV 178
Query: 765 NAVGYDDIGGCRKQLAQIKEMVELP 839
+ Y+DIGG + +L +++E +ELP
Sbjct: 179 KRISYEDIGGLKGELQRVRETIELP 203
>UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putative;
n=1; Theileria parva|Rep: Cell division cycle protein
48, putative - Theileria parva
Length = 954
Score = 53.2 bits (122), Expect = 8e-06
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +3
Query: 693 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPCVILH 854
++ ++VI G + RE +++ VGYDDIGG KQL++I+E++ELP +LH
Sbjct: 336 LIVGESVIDSSGNYLTRENHDDSYGEVGYDDIGGMNKQLSKIRELIELP--LLH 387
Score = 48.8 bits (111), Expect = 2e-04
Identities = 29/97 (29%), Positives = 46/97 (47%)
Frame = +3
Query: 270 DDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXX 449
+ N V + +A+ +L + GD + +KG+RRK TVC V ++ ++
Sbjct: 154 NSNVNVRIGKAQANKLSVMPGDLLKVKGRRRKVTVCGVDVTESITKNEVSFHEDLRRNLR 213
Query: 450 XXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 560
DVV + +V K VHILP D++E L L
Sbjct: 214 LRLGDVVFMEKINTVPEAKFVHILPFKDTIEPLIKQL 250
>UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase,
putative; n=1; Babesia bovis|Rep: Cell division cycle
protein ATPase, putative - Babesia bovis
Length = 922
Score = 53.2 bits (122), Expect = 8e-06
Identities = 21/54 (38%), Positives = 39/54 (72%)
Frame = +3
Query: 693 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPCVILH 854
+++ ++V+ C G + RE+ + + +GYD+IGG KQL++I+E++ELP +LH
Sbjct: 332 LISGESVLDCSGPSLTREQHDASYGELGYDEIGGMDKQLSKIRELIELP--LLH 383
Score = 50.4 bits (115), Expect = 6e-05
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 237 PNRLIVEEAVSDDNSVVALSQAK--MEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDE 410
PN L V V D NS + + K +L + G+ V ++GK+R +TVC+V D N D
Sbjct: 133 PN-LFVLSGVFDGNSSIEIRMGKEPANKLGVAEGNLVRVRGKKRCDTVCVVGIDPNITDN 191
Query: 411 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 539
++ + DV+SI + K V ++P +DSV
Sbjct: 192 QVLIHSDTRRNLKLRTGDVMSIDLISDIPPAKLVKLMPFEDSV 234
>UniRef50_A3H629 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Caldivirga maquilingensis IC-167|Rep: AAA family ATPase,
CDC48 subfamily - Caldivirga maquilingensis IC-167
Length = 852
Score = 52.0 bits (119), Expect = 2e-05
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
Frame = +3
Query: 246 LIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRR--KETVCIVLSDDNCPDEK 413
L V EA S D +V + M ++ + GD V + G +R V SDD D
Sbjct: 10 LRVAEARSRDVGRGIVRVPMRLMRKIGIEPGDYVEISGNKRIAYAQVWPAYSDDEDKDI- 68
Query: 414 IRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFME 593
IRM D+V + +++ +RV + P+ + ++ + YLK ++
Sbjct: 69 IRMDGFIRQNIDVSLDDLVKVRKA-NLRPAQRVTVAPVGEEIK-----IDPDYLKKSYLV 122
Query: 594 AYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAV 773
+P+ R F + A++F + + P+P V +T + +P+ +E L V
Sbjct: 123 G-KPVWRGAIFELPYYTGALKFMITQVIPAPAAYVGTETEVTMQDKPV----QETNLPRV 177
Query: 774 GYDDIGGCRKQLAQIKEMVELP 839
++DIG + +I+E+VELP
Sbjct: 178 TWEDIGDLEEAKQKIRELVELP 199
>UniRef50_Q8THE2 Cluster: Cell division control protein 48; n=7;
cellular organisms|Rep: Cell division control protein 48
- Methanosarcina acetivorans
Length = 753
Score = 50.8 bits (116), Expect = 4e-05
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Frame = +3
Query: 246 LIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSD-DNCPDEKI 416
L V EA D + + M+++ L GD + + G R +T IV + + + +I
Sbjct: 7 LRVAEAYHKDVGRGIARIDTRLMQEMGLVSGDIIEISG--RSKTYAIVWPNVERGQENRI 64
Query: 417 RMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEA 596
R+ D V+I + K+ +RV + P L G + +E
Sbjct: 65 RIDGNLRSNAKVGIDDRVTIQKVQA-KHAQRVTLAP--SQPVRLVGGAHYILR---IIEG 118
Query: 597 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 776
RP+++ V + F V T P+ +V DT I + I EE + +
Sbjct: 119 -RPLNKGQQIRVETVNNPLTFVVASTRPAGPVVVTKDTEIVIKEKSI---EEIKTPEGIS 174
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
Y+DIGG R+++ ++EM+ELP
Sbjct: 175 YEDIGGLRREIQLVREMIELP 195
>UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue,
putative or transitional endoplasmic reticulum ATPase,
putative; n=1; Theileria annulata|Rep: Cell divison
cycle CDC48 homologue, putative or transitional
endoplasmic reticulum ATPase, putative - Theileria
annulata
Length = 905
Score = 50.0 bits (114), Expect = 8e-05
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +3
Query: 693 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPCVILH 854
++ ++VI G + RE+++ + VGYDDIGG KQL++I+E++ELP +LH
Sbjct: 312 LIVGESVIDSGGNYLSREDDD-SFGEVGYDDIGGMNKQLSKIRELIELP--LLH 362
Score = 46.8 bits (106), Expect = 7e-04
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +3
Query: 270 DDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXX 449
+ N V + + + +L L GD V ++G+RRK TVC V ++ ++
Sbjct: 129 NSNVNVKIGKEQANKLNLMTGDFVKVRGRRRKVTVCGVDVTESITKNEVSFHEDLRRNLR 188
Query: 450 XXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 560
D+V + ++ K VHILP D++E L L
Sbjct: 189 LRLGDIVFMDKINTIPEAKIVHILPFKDTIEPLIKQL 225
>UniRef50_Q0W6B6 Cluster: Putative cell division cycle protein 48;
n=1; uncultured methanogenic archaeon RC-I|Rep: Putative
cell division cycle protein 48 - Uncultured methanogenic
archaeon RC-I
Length = 942
Score = 48.0 bits (109), Expect = 3e-04
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 6/204 (2%)
Frame = +3
Query: 246 LIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEK-- 413
L V+EA D + + M QL + GD + ++GK T + P E+
Sbjct: 9 LRVQEAYHRDVGRGIARIDMETMRQLGMVSGDIIEIEGKGAIATAVVW---PGYPSEEGK 65
Query: 414 --IRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 587
I + D V + + K +R+ + P +TG E YL
Sbjct: 66 GVILIDGNIRSNARVGIDDRVKVRKIQAKK-AERITLAPTQPV--RITGG--EYYLLK-L 119
Query: 588 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALN 767
+E RPI + V + F V T P+ I T + +P++ E+ E+ +
Sbjct: 120 LEG-RPISKGQAIRVEMLGSPMTFVVTNTRPAGTVIADMSTEVTISEKPVEAEKAEKTPH 178
Query: 768 AVGYDDIGGCRKQLAQIKEMVELP 839
+ Y+DIGG R+++ ++EM+ELP
Sbjct: 179 -ISYEDIGGLRREIGLVREMIELP 201
>UniRef50_Q5CJ12 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 413
Score = 46.8 bits (106), Expect = 7e-04
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +3
Query: 504 KRVHILPIDDSV-EGLTGNLFEVYLKPYFME-AYRPIHRDDTFMVRGGMRAVEFKVVETD 677
KR+H++P D++ + + ++F+ YLKP+ + P ++F G V+FK++ TD
Sbjct: 202 KRIHVMPFSDTLPQTYSFDIFQDYLKPFLSRYTFHPFSEGESFTYNG----VQFKIIATD 257
Query: 678 PSPF-CIVAPDTVIHCDG 728
P+ + +T I+C G
Sbjct: 258 PAGVKARIGDNTTIYCQG 275
>UniRef50_Q2RI39 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Moorella thermoacetica ATCC 39073|Rep: AAA family
ATPase, CDC48 subfamily - Moorella thermoacetica (strain
ATCC 39073)
Length = 730
Score = 46.0 bits (104), Expect = 0.001
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 3/202 (1%)
Frame = +3
Query: 243 RLIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKI 416
+L V E + +D +V + M++L L D V + GKR + D CP I
Sbjct: 8 KLRVCEGMVEDARKGIVRVLTPVMDELGLKPNDVVAITGKRTTVARIMPAFQDGCPPGNI 67
Query: 417 RMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM-E 593
+M + V+++P + + V + P+ L G V+LK + +
Sbjct: 68 QMDGLQRQNAQVGIGEGVTLSPV-EWETARTVVLAPVLPGWT-LGGEHEIVHLKKHLIGR 125
Query: 594 AYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAV 773
A P + GG A F V P ++ DT + G E E V
Sbjct: 126 AVVPGDQVTIPQFSGGDEA--FTVEGAAPRGAVVITRDTAVRFKGG----EATEGRGQRV 179
Query: 774 GYDDIGGCRKQLAQIKEMVELP 839
Y+DIGG +++ +++E++ELP
Sbjct: 180 TYEDIGGLAREVQRVREIIELP 201
>UniRef50_Q58556 Cluster: Cell division cycle protein 48 homolog
MJ1156; n=64; cellular organisms|Rep: Cell division
cycle protein 48 homolog MJ1156 - Methanococcus
jannaschii
Length = 903
Score = 45.6 bits (103), Expect = 0.002
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 3/201 (1%)
Frame = +3
Query: 246 LIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSD-DNCPDEKI 416
L V EA D + + ME+L L GD + ++G + K + ++ I
Sbjct: 5 LKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGPKGKAYAIVYRGFLEDAGKGII 64
Query: 417 RMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEA 596
R+ D V + +K K+V + P G G FE ++K +
Sbjct: 65 RIDGYLRQNAGVAIGDRVKVKRV-EIKEAKKVVLAPTQPIRFG-PG--FEDFVKRKILGQ 120
Query: 597 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 776
T V G A+ F VV T P+ V T + EP+ E +E + V
Sbjct: 121 VLSKGSKVTIGVLG--TALTFVVVSTTPAGPVRVTDFTHVELKEEPVS-EIKETKVPDVT 177
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
Y+DIGG ++++ +++EM+ELP
Sbjct: 178 YEDIGGLKEEVKKVREMIELP 198
>UniRef50_Q74M89 Cluster: NEQ475; n=1; Nanoarchaeum equitans|Rep:
NEQ475 - Nanoarchaeum equitans
Length = 826
Score = 44.8 bits (101), Expect = 0.003
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 8/207 (3%)
Frame = +3
Query: 243 RLIVEEAVSDDNSV--VALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKI 416
+L V EA +D + V + +++L L GD + ++G R+ + VL ++ I
Sbjct: 10 KLKVAEAYQEDVYLGKVRVDYDVLDRLGLSPGDIIEIEGTRKTYAIADVLYPEDQGLGII 69
Query: 417 RMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEA 596
RM + V + P + K+V + P+ + + + L F+
Sbjct: 70 RMDGVIRKNAGVGVGEYVIVRKPPKPQIAKKVVLAPVKKEEQIIIDEYYLRNLLNGFVVT 129
Query: 597 ---YRPIHRDDT--FMVRGGMRAVEFKVVETDPSPF-CIVAPDTVIHCDGEPIKREEEEE 758
Y + D+ F+ ++ + FKVV T+P I+ DT+I IK +E
Sbjct: 130 KGDYVVVRFDNLGFFIDFLPLKEMWFKVVSTNPPKGPVIIGRDTIIE-----IKPGGVQE 184
Query: 759 ALNAVGYDDIGGCRKQLAQIKEMVELP 839
+ V Y+DIGG + + +++E+VELP
Sbjct: 185 -IPEVTYEDIGGMKDVIQKVRELVELP 210
>UniRef50_A0RUY9 Cluster: AAA ATPase; n=2; Thermoprotei|Rep: AAA
ATPase - Cenarchaeum symbiosum
Length = 724
Score = 44.4 bits (100), Expect = 0.004
Identities = 49/207 (23%), Positives = 83/207 (40%), Gaps = 2/207 (0%)
Frame = +3
Query: 225 RKDRPNRLIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDN 398
RKD P ++ V EA D + M++L++ GD + + G R V +D
Sbjct: 3 RKDGPLQMRVGEAKQRDVGKKRARIGPEAMDRLKVTPGDIIEIAGSRPSCAVVWPNDEDE 62
Query: 399 CPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLK 578
E +R+ +D V I + K K V + P SV F ++K
Sbjct: 63 RSPEVVRIDGQTRKNVGAAINDAVRIRRIQA-KAAKSVILAPASGSVT--VDKEFADFVK 119
Query: 579 PYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEE 758
P+ + D V +++FK+ +T P + T + I E E
Sbjct: 120 NRLKGL--PLSQGDEISVMILGNSIDFKIGKTTPRSVVRMDRSTSLS-----ILTEAPES 172
Query: 759 ALNAVGYDDIGGCRKQLAQIKEMVELP 839
V Y+++GG ++ ++E+VELP
Sbjct: 173 KKARVTYEEVGGLESEIRAMREIVELP 199
>UniRef50_Q9HPU1 Cluster: Cell division cycle protein; n=5;
Euryarchaeota|Rep: Cell division cycle protein -
Halobacterium salinarium (Halobacterium halobium)
Length = 759
Score = 44.0 bits (99), Expect = 0.005
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 14/200 (7%)
Frame = +3
Query: 282 VVALSQAKMEQLQLFRGDTVLLKGK----RRKETVCIVLSDDNCPDEKIRMXXXXXXXXX 449
+ A+ + M++L L GD V++ G+ R V +D+ D +R+
Sbjct: 17 LAAVDRDSMDELALENGDYVVIDGQGDHGRAVARVWPGYPEDD-GDGVVRIDGRLRKEAD 75
Query: 450 XXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYL--KPYFMEAYRPIHRDDT 623
D V++ P G LP + V G + L +P PI
Sbjct: 76 VGIDDQVTVEPADIKPAGGVTVALPQNLRVRGNIAPMVRDRLNGRPVTAGQTIPISFGFG 135
Query: 624 FMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKR--------EEEEEALNAVGY 779
M + + K+ ET+PS +V+ DT I P + E + V Y
Sbjct: 136 GMSTISGQQIPVKIAETEPSGTVVVSNDTEIQLSERPAEEIAPGAGEAAETGDPTPNVTY 195
Query: 780 DDIGGCRKQLAQIKEMVELP 839
+DIGG +L Q++EM+ELP
Sbjct: 196 EDIGGLDGELEQVREMIELP 215
>UniRef50_Q2FMV5 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Methanospirillum hungatei JF-1|Rep: AAA family ATPase,
CDC48 subfamily - Methanospirillum hungatei (strain JF-1
/ DSM 864)
Length = 801
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/80 (28%), Positives = 41/80 (51%)
Frame = +3
Query: 600 RPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGY 779
RP+ T + V F V +P +V T + + P + EE++ ++ Y
Sbjct: 122 RPVIEGQTVRIDLIGNTVTFIVSSLEPRGTGVVTFTTEVILNDTPYQTEEKKSEELSIHY 181
Query: 780 DDIGGCRKQLAQIKEMVELP 839
+DIGG ++++ I+EMVE+P
Sbjct: 182 EDIGGLSREISLIREMVEIP 201
>UniRef50_Q9UYZ7 Cluster: ATPase of the AAA+ family; n=12;
Euryarchaeota|Rep: ATPase of the AAA+ family -
Pyrococcus abyssi
Length = 840
Score = 42.3 bits (95), Expect = 0.016
Identities = 23/67 (34%), Positives = 37/67 (55%)
Frame = +3
Query: 639 GMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQI 818
G ++F VV T P + +T + + + E EE + V Y+DIGG ++ + +I
Sbjct: 167 GFGELKFMVVNTIPKGIVQITYNTEVEVLPQAV--EVREEKIPEVTYEDIGGLKEAIEKI 224
Query: 819 KEMVELP 839
+EMVELP
Sbjct: 225 REMVELP 231
>UniRef50_A2SR43 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Methanocorpusculum labreanum Z|Rep: AAA family ATPase,
CDC48 subfamily - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 826
Score = 41.9 bits (94), Expect = 0.021
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +3
Query: 651 VEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMV 830
+EFKV +P CI+ T + ++E + A+ Y+DIGG + +L +++EM+
Sbjct: 141 LEFKVSAIEPENACILNKMTEL-----VFNDDDEFDGTKAITYEDIGGLKGELKRVREMI 195
Query: 831 ELP 839
ELP
Sbjct: 196 ELP 198
>UniRef50_A1HPK1 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Thermosinus carboxydivorans Nor1|Rep: AAA family ATPase,
CDC48 subfamily - Thermosinus carboxydivorans Nor1
Length = 720
Score = 41.5 bits (93), Expect = 0.027
Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 2/198 (1%)
Frame = +3
Query: 252 VEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 425
V +A+ +D V + M +L L GD V ++G++ + I+M
Sbjct: 11 VADAMPEDVGQGYVRIDNDDMAKLGLIIGDIVEIQGRKTTVAKVVPCYSQFKKQNLIQME 70
Query: 426 XXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRP 605
+ V+I K + + P+D +++ + ++ +
Sbjct: 71 AIIRQNAGVGIDERVTIRKVAH-KVCNTLVLSPLDTTID--FSDAQDIRHLERLLNGLPV 127
Query: 606 IHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDD 785
I D + G RA F V+ T P ++ T I K + +E+ Y+D
Sbjct: 128 IIGDKIKVTLAGARAQYFTVIGTSPQGPVVINAATKITVT----KPDVQEDMSYCASYED 183
Query: 786 IGGCRKQLAQIKEMVELP 839
+GG K+L +I+EM+ELP
Sbjct: 184 VGGLDKELQRIREMIELP 201
>UniRef50_Q8PZP5 Cluster: Cell division control protein; n=4;
Euryarchaeota|Rep: Cell division control protein -
Methanosarcina mazei (Methanosarcina frisia)
Length = 792
Score = 40.3 bits (90), Expect = 0.063
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 18/217 (8%)
Frame = +3
Query: 243 RLIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKI 416
+L VE+A D ++ L + +LQL GD V ++GK+ K T + +D ++ I
Sbjct: 5 QLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKK-KTTAKVWRADRQDWEQGI 63
Query: 417 -RMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLT---GNLFEVYLKPY 584
R+ + V+I + + K + LP + G G +K +
Sbjct: 64 VRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLILALPESMTQGGPELQFGEHANEIIKRH 123
Query: 585 FMEAYRPIHRDDTFMVRGGM-----------RAVEFKVVETDPSPFCIVAPDTV-IHCDG 728
++ RP+ + D + M + + VETDP+ ++ +T I
Sbjct: 124 ILK--RPVFKGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLITETTNIELRK 181
Query: 729 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
+P++ E+ Y+DIGG ++ +++EM+E+P
Sbjct: 182 KPVQGYEKATR-GVTTYEDIGGLGDEIMRVREMIEMP 217
>UniRef50_Q7QTA1 Cluster: GLP_15_26945_31573; n=3; root|Rep:
GLP_15_26945_31573 - Giardia lamblia ATCC 50803
Length = 1542
Score = 37.9 bits (84), Expect = 0.34
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Frame = -1
Query: 543 PQLN-HQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSH-------QGNYRL 388
P +N + +++ G + S K+ +P HEG FS E+ H G Y
Sbjct: 1125 PHMNPYTISISGTRYEFSTKNDTYTVPFPLTVHEGRFSVPTKIEYFHPDRPTCKDGEYAW 1184
Query: 387 RARCKRFPCGVCP*ARLCHHGRVEVAP 307
R + F C +CP C G + P
Sbjct: 1185 RLQTGAFTCMICPTGYFCSEGVMNPCP 1211
>UniRef50_A2QZY1 Cluster: Remark: Cdc48p of S. cerevisiae is more
than twice the length of this protein; n=1; Aspergillus
niger|Rep: Remark: Cdc48p of S. cerevisiae is more than
twice the length of this protein - Aspergillus niger
Length = 302
Score = 37.9 bits (84), Expect = 0.34
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 534 SVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTV 713
+ E L+G L ++ PYF R I+ D + G +EFKV+ P + V T
Sbjct: 179 TTENLSGRLLHDFVNPYFTRCTRLINVHDHIFISSGACDIEFKVLSIKPLEYGFVTQKTN 238
Query: 714 IHCDG 728
I G
Sbjct: 239 IVLSG 243
>UniRef50_Q1GSQ3 Cluster: AAA family ATPase, CDC48 subfamily; n=15;
cellular organisms|Rep: AAA family ATPase, CDC48
subfamily - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 773
Score = 37.5 bits (83), Expect = 0.44
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +3
Query: 654 EFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVE 833
E +++ SP +V D + P +E + V YDD+GG + + Q++EMVE
Sbjct: 165 EVRLLVVSASPKGVVTIDENTEVELLPEYQEPHDARRTDVTYDDLGGLGETIDQLREMVE 224
Query: 834 LP 839
LP
Sbjct: 225 LP 226
>UniRef50_Q8TY20 Cluster: ATPase of the AAA+ class; n=1;
Methanopyrus kandleri|Rep: ATPase of the AAA+ class -
Methanopyrus kandleri
Length = 1249
Score = 36.7 bits (81), Expect = 0.78
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 663 VVETDPSPFCIVAPDTVIHCDGEPIKREEEEEA-LNAVGYDDIGGCRKQLAQIKEMVELP 839
VV +P ++ P+T I +P + + A + V YDDIGG +++ I+E VELP
Sbjct: 177 VVGIEPEDATVIGPETEIEV--KPYSEDLAKAAEIPDVTYDDIGGLDREIELIREYVELP 234
>UniRef50_Q653E3 Cluster: Putative 26S protease regulatory subunit
6B; n=2; Oryza sativa|Rep: Putative 26S protease
regulatory subunit 6B - Oryza sativa subsp. japonica
(Rice)
Length = 448
Score = 36.3 bits (80), Expect = 1.0
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELP 839
V YDDIGGC Q +++E VELP
Sbjct: 187 VAYDDIGGCEAQKREVREAVELP 209
>UniRef50_A5K794 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 615
Score = 36.3 bits (80), Expect = 1.0
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 504 KRVHILPIDDSVEGLTG-NLFEVYLKPYFMEAYRPI-HRDDTFMVRGGMRAVEFKVVETD 677
+ VHI+P+ D++ N+F Y+KPY Y + DTF +G V+FK++ D
Sbjct: 370 RNVHIVPLYDTLPTTYNYNIFADYIKPYIERHYLSLFSMHDTFFYKG----VQFKIMGID 425
Query: 678 P 680
P
Sbjct: 426 P 426
>UniRef50_A4YMQ0 Cluster: Putative Vesicle-fusing ATPase; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative Vesicle-fusing
ATPase - Bradyrhizobium sp. (strain ORS278)
Length = 714
Score = 35.9 bits (79), Expect = 1.4
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +3
Query: 639 GMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQI 818
G + +V T PS ++ +T + I E +A ++ Y+D+GG ++L ++
Sbjct: 142 GGNSTSCEVTATRPSGPVLITTETRLD-----ISAREVGDADRSITYEDLGGVDQELQRV 196
Query: 819 KEMVELP 839
+EMVELP
Sbjct: 197 REMVELP 203
>UniRef50_A4YDZ5 Cluster: Vesicle-fusing ATPase; n=2;
Sulfolobaceae|Rep: Vesicle-fusing ATPase -
Metallosphaera sedula DSM 5348
Length = 703
Score = 35.5 bits (78), Expect = 1.8
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 654 EFKVVETDP-SPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMV 830
EF VV +P + ++ +T I GE IK+ ++ L V +D+GG Q+ +KE++
Sbjct: 132 EFAVVSFEPRAEVGMIVGETEIEITGEIIKQTQKNIPL--VSLEDVGGLTDQIMSLKEII 189
Query: 831 ELPCVILHCSRL 866
++ V RL
Sbjct: 190 DIALVKPEVPRL 201
>UniRef50_P35998 Cluster: 26S protease regulatory subunit 7; n=130;
Eukaryota|Rep: 26S protease regulatory subunit 7 - Homo
sapiens (Human)
Length = 433
Score = 35.5 bits (78), Expect = 1.8
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELPCVILHCSRLL 869
V Y D+GGC++Q+ +++E+VE P +LH R +
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETP--LLHPERFV 202
>UniRef50_Q9AW43 Cluster: 26S proteasome AAA-ATPase subunit; n=1;
Guillardia theta|Rep: 26S proteasome AAA-ATPase subunit
- Guillardia theta (Cryptomonas phi)
Length = 395
Score = 35.1 bits (77), Expect = 2.4
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +3
Query: 666 VETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
V DPS I+ VI +PI E + + V +GG KQ+ QIKE++ELP
Sbjct: 102 VALDPSTLTIMK---VIKNKVDPIIEEMMKSSNKKVELYHVGGLEKQIKQIKELIELP 156
>UniRef50_Q7QYT8 Cluster: GLP_70_13103_11571; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_70_13103_11571 - Giardia lamblia
ATCC 50803
Length = 510
Score = 34.7 bits (76), Expect = 3.1
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELPCVILHCSR 863
Y DIGGC KQL I+E +ELP +LH R
Sbjct: 248 YRDIGGCAKQLKLIRESLELP--LLHPQR 274
>UniRef50_Q6N2G6 Cluster: AAA ATPase; n=2; Rhodopseudomonas
palustris|Rep: AAA ATPase - Rhodopseudomonas palustris
Length = 663
Score = 34.3 bits (75), Expect = 4.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELPCVILH 854
YDD+GG +++A ++EMVELP H
Sbjct: 124 YDDVGGLAREVALVREMVELPLRFPH 149
>UniRef50_A7BC87 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 514
Score = 34.3 bits (75), Expect = 4.1
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +3
Query: 729 EPIKREEEEEALNA----VGYDDIGGCRKQLAQIKEMVELP 839
E I RE+ E+ L V Y+DIGG Q+AQ+++ +E+P
Sbjct: 165 ERIVREDVEQLLTPEVPDVTYEDIGGLDDQIAQVRDSIEMP 205
>UniRef50_Q7RTI8 Cluster: Putative uncharacterized protein PY00003;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00003 - Plasmodium yoelii yoelii
Length = 628
Score = 33.9 bits (74), Expect = 5.5
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 510 VHILPIDDSVEGLTG-NLFEVYLKPYFMEAY-RPIHRDDTFMVRGGMRAVEFKVVETDP 680
VHI+P+ D++ NLF Y+KPY Y DTF RG V+FK++ +P
Sbjct: 372 VHIVPLYDTLPTTYNYNLFIDYIKPYIERHYLNTFSIYDTFFYRG----VQFKIMGVEP 426
>UniRef50_UPI0001555990 Cluster: PREDICTED: similar to
spermatogenesis associated 5; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to spermatogenesis
associated 5 - Ornithorhynchus anatinus
Length = 475
Score = 33.5 bits (73), Expect = 7.2
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELP 839
V YD IGG +QL +I+E+VELP
Sbjct: 184 VTYDSIGGLGRQLQEIRELVELP 206
>UniRef50_Q7R4L3 Cluster: GLP_49_27747_26542; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_49_27747_26542 - Giardia lamblia
ATCC 50803
Length = 401
Score = 33.1 bits (72), Expect = 9.6
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
YDDIGG KQ+ +++E++ELP
Sbjct: 142 YDDIGGLSKQVLELREILELP 162
>UniRef50_Q5V0R7 Cluster: Cell division cycle protein 48; n=1;
Haloarcula marismortui|Rep: Cell division cycle protein
48 - Haloarcula marismortui (Halobacterium marismortui)
Length = 695
Score = 33.1 bits (72), Expect = 9.6
Identities = 44/194 (22%), Positives = 74/194 (38%), Gaps = 4/194 (2%)
Frame = +3
Query: 261 AVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXX 440
+V + N +A+ +L L VL++ +R + V D+ P E R+
Sbjct: 10 SVDEANESIAVPTTVGTRLGLGGNGAVLIRKQRGQVQAATVRQADSVPAETARVGPQTAE 69
Query: 441 XXXXXXSDVVSI-APCPSVKYGKRVHILPIDD-SVEGLTGNLFEVYLKPYFMEAYRPIHR 614
D V++ A P+V + + P+ S+ G G + + RP+
Sbjct: 70 TLGLRDGDRVTVEAADPAV--ATHISVAPVPQLSIRGGEGLVRDAV-------GDRPLLD 120
Query: 615 DDTFMVR--GGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDI 788
DT V G V +VV T P+ + DTVI P R L+ + +
Sbjct: 121 GDTITVSLFDGSLTVPVRVVSTQPAGPVTLVDDTVIEITDGPAPR-RSNSGLDPLAETAV 179
Query: 789 GGCRKQLAQIKEMV 830
GG +A ++ V
Sbjct: 180 GGYADTVATLETAV 193
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 840,089,394
Number of Sequences: 1657284
Number of extensions: 16582141
Number of successful extensions: 44302
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 42572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44276
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -