Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D05
(879 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 303 9e-83
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 302 3e-82
08_02_0657 - 19749835-19751942,19753123-19753561 231 4e-61
09_06_0271 + 21959213-21960559 36 0.032
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 36 0.032
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 36 0.032
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 33 0.23
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 31 0.92
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 31 1.6
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 31 1.6
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 31 1.6
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 30 2.1
07_03_1644 - 28338535-28339103,28339512-28340326,28341104-283412... 29 4.9
06_01_0057 - 483710-484309 28 8.6
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 303 bits (745), Expect = 9e-83
Identities = 137/205 (66%), Positives = 167/205 (81%)
Frame = +3
Query: 225 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 404
RK PNRL+V+EA +DDNSV+ + ME+LQLFRGDTVLLKGK+RK+T+CIVL+DD C
Sbjct: 26 RKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFRGDTVLLKGKKRKDTICIVLADDTCE 85
Query: 405 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 584
+ KIRM DVVS+ CP VKYGKRVHILPIDD+VEG+TGNLF+ +LKPY
Sbjct: 86 EPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDAFLKPY 145
Query: 585 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 764
F+EAYRP+ + D F+VRGGMR+VEFKV+ETDP+ +CIVAPDT I CDGEPIKRE+EE L
Sbjct: 146 FLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYCIVAPDTEIFCDGEPIKREDEER-L 204
Query: 765 NAVGYDDIGGCRKQLAQIKEMVELP 839
+ VGYDD+GG RKQ+AQI+E+VELP
Sbjct: 205 DEVGYDDVGGVRKQMAQIRELVELP 229
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 302 bits (741), Expect = 3e-82
Identities = 138/205 (67%), Positives = 167/205 (81%)
Frame = +3
Query: 225 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 404
RK PNRL+V+EA +DDNSVVAL ME+LQLFRGDTVLLKGK+RK+T+CIVL+D+ C
Sbjct: 26 RKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLADETCE 85
Query: 405 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 584
+ KIRM DVVS+ C VKYGKRVHILPIDD+VEG+TGNLF+ +LKPY
Sbjct: 86 EPKIRMNKVVRKNLRVRLGDVVSVHQCQDVKYGKRVHILPIDDTVEGITGNLFDAFLKPY 145
Query: 585 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 764
F+EAYRP+ + D F+VRGGMR+VEFKV+ETDP+ +CIVAPDT I CDGEPIKRE+EE L
Sbjct: 146 FLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPTEYCIVAPDTEIFCDGEPIKREDEER-L 204
Query: 765 NAVGYDDIGGCRKQLAQIKEMVELP 839
+ VGYDD+GG RKQ+AQI+E+VELP
Sbjct: 205 DEVGYDDVGGVRKQMAQIRELVELP 229
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 231 bits (566), Expect = 4e-61
Identities = 111/210 (52%), Positives = 152/210 (72%), Gaps = 5/210 (2%)
Frame = +3
Query: 225 RKDRPNRLIVEEA---VSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDD 395
+K PNRL+ ++A V+ DNS V LS+A ME+L +FRGD V L+G+RR+E VC D+
Sbjct: 26 KKKSPNRLMADDAEGGVAVDNSTVTLSEATMEELGIFRGDLVTLRGRRRREAVCYAQKDE 85
Query: 396 NCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYL 575
+CPD ++R+ D+V++ PCP+++ KRV + P DDSVEG++G+LFE YL
Sbjct: 86 SCPDGRLRLSRGVRSNLHVRLGDLVTVKPCPTIRNAKRVQLRPFDDSVEGISGDLFEPYL 145
Query: 576 KPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP-SPFCIVAPDTVIHCD-GEPIKREE 749
KPYFM+A RP+ + D F+VRG M AVEFKV++T+P + IVA DT I CD G+P+KRE+
Sbjct: 146 KPYFMDALRPVKKGDRFLVRGHMHAVEFKVMDTEPNNEPVIVAGDTEIFCDEGDPVKRED 205
Query: 750 EEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
EE L+ GYDD+GG RKQLAQI+E+VELP
Sbjct: 206 EER-LDGPGYDDVGGVRKQLAQIRELVELP 234
>09_06_0271 + 21959213-21960559
Length = 448
Score = 36.3 bits (80), Expect = 0.032
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELP 839
V YDDIGGC Q +++E VELP
Sbjct: 187 VAYDDIGGCEAQKREVREAVELP 209
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 36.3 bits (80), Expect = 0.032
Identities = 14/34 (41%), Positives = 27/34 (79%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELPCVILHCSRLLE 872
V Y+D+GGC++Q+ +++E+VELP +LH + ++
Sbjct: 165 VTYNDVGGCKEQIEKMREVVELP--MLHPEKFVK 196
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 36.3 bits (80), Expect = 0.032
Identities = 14/34 (41%), Positives = 27/34 (79%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELPCVILHCSRLLE 872
V Y+D+GGC++Q+ +++E+VELP +LH + ++
Sbjct: 165 VTYNDVGGCKEQIEKMREVVELP--MLHPEKFVK 196
>03_05_0754 + 27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 575 EAVLHGGLPSDPS*RHLHGPRGHARRRVQSGRNRSITILHRG 700
E++ H L + S HLHG G RR + +GR R+I +L G
Sbjct: 1248 ESLPHETLQASSSAVHLHGHHGRLRRFLAAGRLRAIDVLGHG 1289
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELP 839
V Y DIGGC Q +I+E VELP
Sbjct: 112 VTYTDIGGCDIQKQEIREAVELP 134
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 687 FCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
F +++ ++ + +P+ + E Y DIGG Q+ +IKE VELP
Sbjct: 176 FQVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELP 226
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
YD IGG +Q+ +IKE++ELP
Sbjct: 187 YDMIGGLDQQIKEIKEVIELP 207
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
YD IGG +Q+ +IKE++ELP
Sbjct: 165 YDMIGGLDQQIKEIKEVIELP 185
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 711 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
++ + +P+ + E Y DIGG Q+ +IKE VELP
Sbjct: 206 ILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELP 248
>07_03_1644 -
28338535-28339103,28339512-28340326,28341104-28341205,
28342469-28342594,28342782-28343071
Length = 633
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 671 FDHFELDGAHAPADHEGVVTMDRTVSLHEVRLQVYFE 561
F+ L+ DHE V+ D+ VSL +V++ Y+E
Sbjct: 401 FEFIPLEDGLRLTDHEEVIENDKLVSLVDVKVGCYYE 437
>06_01_0057 - 483710-484309
Length = 199
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 220 PXARTDPTVSLSKKQSAMTTQS-WHFHRPKWSNFNSSVVTQSCSR 351
P ART P ++ + A S W F WS+ S V+T+ SR
Sbjct: 67 PAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSR 111
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,081,322
Number of Sequences: 37544
Number of extensions: 472129
Number of successful extensions: 1327
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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