Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D05
(879 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 352 1e-96
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 352 1e-96
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 352 1e-96
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 352 1e-96
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 349 8e-96
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 277 4e-74
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 127 5e-29
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 36 0.26
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 36 0.26
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 36 0.26
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 36 0.26
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 33 1.8
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 33 1.8
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 33 1.8
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 33 1.8
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 32 3.2
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 32 3.2
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 32 3.2
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 32 3.2
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 32 3.2
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 32 3.2
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 32 3.2
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 32 3.2
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 31 4.2
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 31 4.2
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 31 4.2
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 31 4.2
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 31 4.2
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 31 7.3
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 31 7.3
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 31 7.3
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 31 7.3
AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens ... 31 7.3
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 31 7.3
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 352 bits (865), Expect = 1e-96
Identities = 159/205 (77%), Positives = 182/205 (88%)
Frame = +3
Query: 225 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 404
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 405 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 584
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 585 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 764
F+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 765 NAVGYDDIGGCRKQLAQIKEMVELP 839
N VGYDDIGGCRKQLAQIKEMVELP
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELP 223
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 352 bits (865), Expect = 1e-96
Identities = 159/205 (77%), Positives = 182/205 (88%)
Frame = +3
Query: 225 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 404
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 405 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 584
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 585 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 764
F+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 765 NAVGYDDIGGCRKQLAQIKEMVELP 839
N VGYDDIGGCRKQLAQIKEMVELP
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELP 223
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 352 bits (865), Expect = 1e-96
Identities = 159/205 (77%), Positives = 182/205 (88%)
Frame = +3
Query: 225 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 404
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 405 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 584
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 585 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 764
F+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 765 NAVGYDDIGGCRKQLAQIKEMVELP 839
N VGYDDIGGCRKQLAQIKEMVELP
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELP 223
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 352 bits (865), Expect = 1e-96
Identities = 159/205 (77%), Positives = 182/205 (88%)
Frame = +3
Query: 225 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 404
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 405 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 584
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 585 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 764
F+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 765 NAVGYDDIGGCRKQLAQIKEMVELP 839
N VGYDDIGGCRKQLAQIKEMVELP
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELP 223
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 349 bits (858), Expect = 8e-96
Identities = 158/205 (77%), Positives = 181/205 (88%)
Frame = +3
Query: 225 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 404
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 405 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 584
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 585 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 764
F+EAYRPI + D F+VRGGMRAVEFKVVET PSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETHPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 765 NAVGYDDIGGCRKQLAQIKEMVELP 839
N VGYDDIGGCRKQLAQIKEMVELP
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELP 223
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 277 bits (679), Expect = 4e-74
Identities = 124/159 (77%), Positives = 137/159 (86%)
Frame = +3
Query: 363 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 542
+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62
Query: 543 GLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHC 722
G+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC
Sbjct: 63 GITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHC 122
Query: 723 DGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQIKEMVELP
Sbjct: 123 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELP 161
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 127 bits (307), Expect = 5e-29
Identities = 56/61 (91%), Positives = 60/61 (98%)
Frame = +3
Query: 657 FKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEL 836
FKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQIKEMVEL
Sbjct: 1 FKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVEL 60
Query: 837 P 839
P
Sbjct: 61 P 61
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELPCVILHCSRLL 869
V Y D+GGC++Q+ +++E+VE P +LH R +
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETP--LLHPERFV 202
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELPCVILHCSRLL 869
V Y D+GGC++Q+ +++E+VE P +LH R +
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETP--LLHPERFV 202
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELPCVILHCSRLL 869
V Y D+GGC++Q+ +++E+VE P +LH R +
Sbjct: 148 VTYSDVGGCKEQIEKLREVVETP--LLHPERFV 178
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELPCVILHCSRLL 869
V Y D+GGC++Q+ +++E+VE P +LH R +
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETP--LLHPERFV 202
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 738 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
K +E++ V YD IGG QL I+E++ELP
Sbjct: 338 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELP 371
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 738 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
K +E++ V YD IGG QL I+E++ELP
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELP 372
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 738 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
K +E++ V YD IGG QL I+E++ELP
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELP 372
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 738 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
K +E++ V YD IGG QL I+E++ELP
Sbjct: 339 KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELP 372
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 711 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
V+ D +P+ + E Y DIGG Q+ +IKE VELP
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 711 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
V+ D +P+ + E Y DIGG Q+ +IKE VELP
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 711 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
V+ D +P+ + E Y DIGG Q+ +IKE VELP
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 711 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
V+ D +P+ + E Y DIGG Q+ +IKE VELP
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 711 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
V+ D +P+ + E Y DIGG Q+ +IKE VELP
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 711 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
V+ D +P+ + E Y DIGG Q+ +IKE VELP
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 711 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
V+ D +P+ + E Y DIGG Q+ +IKE VELP
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 711 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
V+ D +P+ + E Y DIGG Q+ +IKE VELP
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 729 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
+P+ E V Y +IGG +Q+ +++E++ELP
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELP 152
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 729 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
+P+ E V Y +IGG +Q+ +++E++ELP
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELP 152
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 729 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
+P+ E V Y +IGG +Q+ +++E++ELP
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELP 152
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 729 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
+P+ E V Y +IGG +Q+ +++E++ELP
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELP 152
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 729 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
+P+ E V Y +IGG +Q+ +++E++ELP
Sbjct: 116 DPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELP 152
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 30.7 bits (66), Expect = 7.3
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
Y+ IGG KQ+ +IKE++ELP
Sbjct: 148 YEMIGGLDKQIKEIKEVIELP 168
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 30.7 bits (66), Expect = 7.3
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
Y+ IGG KQ+ +IKE++ELP
Sbjct: 148 YEMIGGLDKQIKEIKEVIELP 168
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 30.7 bits (66), Expect = 7.3
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
Y+ IGG KQ+ +IKE++ELP
Sbjct: 148 YEMIGGLDKQIKEIKEVIELP 168
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 30.7 bits (66), Expect = 7.3
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
Y+ IGG KQ+ +IKE++ELP
Sbjct: 148 YEMIGGLDKQIKEIKEVIELP 168
>AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens
clone 23598 mRNA, complete cds. ).
Length = 280
Score = 30.7 bits (66), Expect = 7.3
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
Y+ IGG KQ+ +IKE++ELP
Sbjct: 22 YEMIGGLDKQIKEIKEVIELP 42
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 30.7 bits (66), Expect = 7.3
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
Y+ IGG KQ+ +IKE++ELP
Sbjct: 144 YEMIGGLDKQIKEIKEVIELP 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,766,515
Number of Sequences: 237096
Number of extensions: 2524156
Number of successful extensions: 6136
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 5887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6136
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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