Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D05
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 302 2e-82
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 297 5e-81
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 297 5e-81
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 36 0.038
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 34 0.15
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 34 0.15
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 31 0.82
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 30 1.9
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 28 7.7
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 28 7.7
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 302 bits (741), Expect = 2e-82
Identities = 132/204 (64%), Positives = 171/204 (83%)
Frame = +3
Query: 228 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 407
K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE+V I++SD++CP+
Sbjct: 26 KVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAIIVSDESCPN 85
Query: 408 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 587
EK+RM DVVSI P P++ YG R+H+LPIDD++EGLTGNLF+V+LKPYF
Sbjct: 86 EKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKPYF 145
Query: 588 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALN 767
+EAYRP+H+ D F V+ MR VEFKVVET+P+P CIV+PDT+IH +G+PIKREEEEE++N
Sbjct: 146 LEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPIKREEEEESMN 205
Query: 768 AVGYDDIGGCRKQLAQIKEMVELP 839
+GYDD+GG RKQLAQIKEMVELP
Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELP 229
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 297 bits (730), Expect = 5e-81
Identities = 137/204 (67%), Positives = 170/204 (83%)
Frame = +3
Query: 228 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 407
K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+ETV IVL+ DNCP+
Sbjct: 26 KKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPN 85
Query: 408 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 587
+KI+M DVVSI+ ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF
Sbjct: 86 DKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYF 144
Query: 588 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALN 767
+AYRP+H+ D F V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN
Sbjct: 145 TDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALN 204
Query: 768 AVGYDDIGGCRKQLAQIKEMVELP 839
VGYDD+GG RKQLAQIKEMVELP
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELP 228
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 297 bits (730), Expect = 5e-81
Identities = 137/204 (67%), Positives = 170/204 (83%)
Frame = +3
Query: 228 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 407
K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+ETV IVL+ DNCP+
Sbjct: 26 KKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPN 85
Query: 408 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 587
+KI+M DVVSI+ ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF
Sbjct: 86 DKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYF 144
Query: 588 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALN 767
+AYRP+H+ D F V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN
Sbjct: 145 TDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALN 204
Query: 768 AVGYDDIGGCRKQLAQIKEMVELP 839
VGYDD+GG RKQLAQIKEMVELP
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELP 228
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 35.9 bits (79), Expect = 0.038
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
+DDIGGC Q+ ++KE VELP
Sbjct: 182 FDDIGGCESQIQELKESVELP 202
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELPCVILHCSR 863
V Y D+GGC+ Q+ +++E+VE P +LH R
Sbjct: 174 VTYSDVGGCKDQIEKLREVVETP--LLHPER 202
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 729 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPCV 845
+P+ + E + Y D+GG +Q+ +++E+VELP +
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLI 163
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 729 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPCV 845
+P+ + E + Y D+GG +Q+ +++E+VELP +
Sbjct: 133 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLI 171
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 31.5 bits (68), Expect = 0.82
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 711 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELP 839
V+ D +P+ + E Y D+GG +Q+ +IKE VELP
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELP 207
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
Y+ +GG KQ+ +IKE++ELP
Sbjct: 158 YEMVGGLDKQIKEIKEVIELP 178
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
Y DIGGC KQ+ ++ E V LP
Sbjct: 176 YSDIGGCDKQIQELIEAVVLP 196
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 672 TDPSPFCIVAPDTVIHCDGEPIKREEEEE--ALNAVGYD 782
++P+P VAP+ + E + E+EE A+ +GYD
Sbjct: 153 SNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYD 191
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
+D+IGGC + +A++K+ + LP
Sbjct: 79 WDEIGGCEELVAELKDRIILP 99
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 777 YDDIGGCRKQLAQIKEMVELP 839
+D+IGGC + +A++K+ + LP
Sbjct: 82 WDEIGGCEELVAELKDRIILP 102
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 771 VGYDDIGGCRKQLAQIKEMVELP 839
+ Y DIGG Q +++E VELP
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELP 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,445,853
Number of Sequences: 27780
Number of extensions: 402787
Number of successful extensions: 1076
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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