Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_D03
(906 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1773|AAF48168.2| 816|Drosophila melanogaster CG2559-PA... 59 7e-09
X97770-1|CAA66371.1| 718|Drosophila melanogaster larval serum p... 59 9e-09
AY119005-1|AAM50865.1| 701|Drosophila melanogaster LP03332p pro... 59 9e-09
AY069748-1|AAL39893.1| 772|Drosophila melanogaster LP08717p pro... 59 9e-09
AF016033-1|AAB71666.1| 711|Drosophila melanogaster larval serum... 59 9e-09
AE014296-2095|AAF49958.1| 701|Drosophila melanogaster CG6806-PA... 59 9e-09
AE014296-2|AAF47324.1| 772|Drosophila melanogaster CG6821-PA pr... 59 9e-09
U63556-1|AAB58821.1| 789|Drosophila melanogaster larval serum p... 55 1e-07
BT024223-1|ABC86285.1| 789|Drosophila melanogaster LP18812p pro... 55 1e-07
AY069163-1|AAL39308.1| 789|Drosophila melanogaster GH19329p pro... 55 1e-07
AE014134-182|AAF51434.1| 789|Drosophila melanogaster CG4178-PA ... 55 1e-07
AY118687-1|AAM50547.1| 583|Drosophila melanogaster AT15352p pro... 35 0.13
AE014296-2359|AAF49758.2| 583|Drosophila melanogaster CG8100-PA... 33 0.71
AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA... 31 2.2
AE014296-3009|AAF49269.1| 575|Drosophila melanogaster CG7320-PA... 29 8.8
>AE014298-1773|AAF48168.2| 816|Drosophila melanogaster CG2559-PA
protein.
Length = 816
Score = 59.3 bits (137), Expect = 7e-09
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 163 AFVEKQKXLLSLFYNVNXXXYEAEYYKVAQDFNIEAXKDCYTNMKAY-ENFMMMYXV-GF 336
AF+ KQK L + Y V EY + + F + K+ YT+ Y E F +
Sbjct: 31 AFLMKQKFLFEIVYRVEDPLMFEEYIAMGKQFYFD--KEHYTHFDLYMEKFFEAHKAHAL 88
Query: 337 LPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYARVYMN 474
LPK F + ++A LF FYYAKD+E F +AR++ N
Sbjct: 89 LPKGEFFGALVKHHAKQARGLFNFFYYAKDWETFMTNVAFARMHFN 134
Score = 44.8 bits (101), Expect = 2e-04
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +2
Query: 479 GMFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVN----MEVKNXMDYVKMMDGCLDEK 643
GMF+YA +A+I R D VLPA +E +PQ+F N ME + DY M L EK
Sbjct: 136 GMFVYALTLAVIHRDDFHGLVLPAIHEIFPQFFFNSKFVMEAEK-FDYEMWMKTSLYEK 193
Score = 37.5 bits (83), Expect = 0.025
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 677 EQFVMYAXYSNSLTYPNNEXRIAYLTEDVGLXAYYYY 787
++F M YS L N E +++Y TED+G +Y+YY
Sbjct: 293 KKFYMPVDYSRDLYLYNEESKLSYFTEDLGWNSYWYY 329
>X97770-1|CAA66371.1| 718|Drosophila melanogaster larval serum
protein 2 protein.
Length = 718
Score = 58.8 bits (136), Expect = 9e-09
Identities = 34/110 (30%), Positives = 53/110 (48%)
Frame = +2
Query: 482 MFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVNMEVKNXMDYVKMMDGCLDEKICYXYG 661
+F+YA IA + R D VLPA YE +P + + + ++ KM +++ Y
Sbjct: 139 LFVYAVTIASLFRDDMQGVVLPAHYEIHPWSYFDSQALEWAEHYKMHGFHHVKQMDNIYN 198
Query: 662 IIXENEQFVMYAXYSNSLTYPNNEXRIAYLTEDVGLXAYYYYFXSXLPXW 811
++ Y+ SL Y ++ +AY EDVG A+YYYF P W
Sbjct: 199 VVIRTN----YSNVHGSLNYDHD---LAYYLEDVGFNAFYYYFNLDYPFW 241
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 283 YTNMKAYENFMMMYXVGFLPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYAR 462
Y + + E+F ++ ++ +S+ Y+K E L +LFY+AK++E F +AR
Sbjct: 73 YVHPEMLEHFFELWQHQPFTDDMVWSVMYDKHEEYVVGLVRLFYFAKNWETFQHVVYWAR 132
Query: 463 VYMN 474
++N
Sbjct: 133 QHVN 136
>AY119005-1|AAM50865.1| 701|Drosophila melanogaster LP03332p
protein.
Length = 701
Score = 58.8 bits (136), Expect = 9e-09
Identities = 34/110 (30%), Positives = 53/110 (48%)
Frame = +2
Query: 482 MFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVNMEVKNXMDYVKMMDGCLDEKICYXYG 661
+F+YA IA + R D VLPA YE +P + + + ++ KM +++ Y
Sbjct: 139 LFVYAVTIASLFRDDMQGVVLPAHYEIHPWSYFDSQALEWAEHYKMHGFHHVKQMDNIYN 198
Query: 662 IIXENEQFVMYAXYSNSLTYPNNEXRIAYLTEDVGLXAYYYYFXSXLPXW 811
++ Y+ SL Y ++ +AY EDVG A+YYYF P W
Sbjct: 199 VVIRTN----YSNVHGSLNYDHD---LAYYLEDVGFNAFYYYFNLDYPFW 241
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 283 YTNMKAYENFMMMYXVGFLPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYAR 462
Y + + E+F ++ ++ +S+ Y+K E L +LFY+AK++E F +AR
Sbjct: 73 YVHPEMLEHFFELWQHQPFTDDMVWSVMYDKHEEYVVGLVRLFYFAKNWETFQHVVYWAR 132
Query: 463 VYMN 474
++N
Sbjct: 133 QHVN 136
>AY069748-1|AAL39893.1| 772|Drosophila melanogaster LP08717p
protein.
Length = 772
Score = 58.8 bits (136), Expect = 9e-09
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +1
Query: 127 TVPXFKTXPVXAAFVEKQKXLLSLFYNVNXXXYEAEYYKVAQDFNIEAXKDCYTNMKAY- 303
+VP K F+EKQK L + + ++ E+ K+ Q + K Y Y
Sbjct: 18 SVPTQKVKIADKNFLEKQKFLFEIVHRIDEPLMFEEWIKMGQ--KLITDKAQYETFDFYM 75
Query: 304 ENFMMMYXVG-FLPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYARVYMN 474
E Y +G LPK F + ++A LF FYYAKD+E F + +AR+++N
Sbjct: 76 EKLWESYKLGALLPKGEFFGALVKTHHKQAYGLFNFFYYAKDWETFVRNVAWARIHVN 133
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 479 GMFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVN 583
GMF+YA +A+I + + +LP YE +PQYF N
Sbjct: 135 GMFVYALTLAVIHKPEFEGLILPQIYEIFPQYFFN 169
Score = 37.9 bits (84), Expect = 0.019
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 677 EQFVMYAXYSNSLTYPNNEXRIAYLTEDVGLXAYYYY 787
++F M Y+ + + N+E ++ Y TED+G AY+YY
Sbjct: 260 KKFYMPVDYTRDIDFFNDETKMTYFTEDLGWNAYWYY 296
>AF016033-1|AAB71666.1| 711|Drosophila melanogaster larval serum
protein 1 gamma protein.
Length = 711
Score = 58.8 bits (136), Expect = 9e-09
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +1
Query: 127 TVPXFKTXPVXAAFVEKQKXLLSLFYNVNXXXYEAEYYKVAQDFNIEAXKDCYTNMKAY- 303
+VP K F+EKQK L + + ++ E+ K+ Q + K Y Y
Sbjct: 18 SVPTQKVKIADKNFLEKQKFLFEIVHRIDEPLMFEEWIKMGQ--KLITDKAQYETFDFYM 75
Query: 304 ENFMMMYXVG-FLPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYARVYMN 474
E Y +G LPK F + ++A LF FYYAKD+E F + +AR+++N
Sbjct: 76 EKLWESYKLGALLPKGEFFGALVKTHHKQAYGLFNFFYYAKDWETFVRNVAWARIHVN 133
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 479 GMFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVN 583
GMF+YA +A+I + + +LP YE +PQYF N
Sbjct: 135 GMFVYALTLAVIHKPEFEGLILPQIYEIFPQYFFN 169
Score = 37.9 bits (84), Expect = 0.019
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 677 EQFVMYAXYSNSLTYPNNEXRIAYLTEDVGLXAYYYY 787
++F M Y+ + + N+E ++ Y TED+G AY+YY
Sbjct: 260 KKFYMPVDYTRDIDFFNDETKMTYFTEDLGWNAYWYY 296
>AE014296-2095|AAF49958.1| 701|Drosophila melanogaster CG6806-PA
protein.
Length = 701
Score = 58.8 bits (136), Expect = 9e-09
Identities = 34/110 (30%), Positives = 53/110 (48%)
Frame = +2
Query: 482 MFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVNMEVKNXMDYVKMMDGCLDEKICYXYG 661
+F+YA IA + R D VLPA YE +P + + + ++ KM +++ Y
Sbjct: 139 LFVYAVTIASLFRDDMQGVVLPAHYEIHPWSYFDSQALEWAEHYKMHGFHHVKQMDNIYN 198
Query: 662 IIXENEQFVMYAXYSNSLTYPNNEXRIAYLTEDVGLXAYYYYFXSXLPXW 811
++ Y+ SL Y ++ +AY EDVG A+YYYF P W
Sbjct: 199 VVIRTN----YSNVHGSLNYDHD---LAYYLEDVGFNAFYYYFNLDYPFW 241
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 283 YTNMKAYENFMMMYXVGFLPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYAR 462
Y + + E+F ++ ++ +S+ Y+K E L +LFY+AK++E F +AR
Sbjct: 73 YVHPEMLEHFFELWQHQPFTDDMVWSVMYDKHEEYVVGLVRLFYFAKNWETFQHVVYWAR 132
Query: 463 VYMN 474
++N
Sbjct: 133 QHVN 136
>AE014296-2|AAF47324.1| 772|Drosophila melanogaster CG6821-PA
protein.
Length = 772
Score = 58.8 bits (136), Expect = 9e-09
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +1
Query: 127 TVPXFKTXPVXAAFVEKQKXLLSLFYNVNXXXYEAEYYKVAQDFNIEAXKDCYTNMKAY- 303
+VP K F+EKQK L + + ++ E+ K+ Q + K Y Y
Sbjct: 18 SVPTQKVKIADKNFLEKQKFLFEIVHRIDEPLMFEEWIKMGQ--KLITDKAQYETFDFYM 75
Query: 304 ENFMMMYXVG-FLPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYARVYMN 474
E Y +G LPK F + ++A LF FYYAKD+E F + +AR+++N
Sbjct: 76 EKLWESYKLGALLPKGEFFGALVKTHHKQAYGLFNFFYYAKDWETFVRNVAWARIHVN 133
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 479 GMFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVN 583
GMF+YA +A+I + + +LP YE +PQYF N
Sbjct: 135 GMFVYALTLAVIHKPEFEGLILPQIYEIFPQYFFN 169
Score = 37.9 bits (84), Expect = 0.019
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 677 EQFVMYAXYSNSLTYPNNEXRIAYLTEDVGLXAYYYY 787
++F M Y+ + + N+E ++ Y TED+G AY+YY
Sbjct: 260 KKFYMPVDYTRDIDFFNDETKMTYFTEDLGWNAYWYY 296
>U63556-1|AAB58821.1| 789|Drosophila melanogaster larval serum
protein 1 beta subunitprotein.
Length = 789
Score = 55.2 bits (127), Expect = 1e-07
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 163 AFVEKQKXLLSLFYNVNXXXYEAEYYKVAQDFNIEAXKDCYTNMKAY-ENFMMMYXV-GF 336
AF+ KQK L + Y V ++ K + F E + YT+ Y + F Y
Sbjct: 31 AFLMKQKFLFEIVYRVEDPLMFEDHIKQGEKFYFE--ESYYTHYDMYMKKFFEAYKAHAL 88
Query: 337 LPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYARVYMN 474
LPK F ++A LF FYYAKD+E F +AR+++N
Sbjct: 89 LPKGEFFGALVMSHAKQARGLFNFFYYAKDWETFAANVAWARMHVN 134
Score = 42.7 bits (96), Expect = 7e-04
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 479 GMFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVN 583
GMF+YA +A+I R+D +LP+ YE +PQ+F N
Sbjct: 136 GMFVYALTMAVIHRNDFHGLMLPSIYEIFPQFFFN 170
Score = 38.3 bits (85), Expect = 0.014
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 677 EQFVMYAXYSNSLTYPNNEXRIAYLTEDVGLXAYYYY 787
++F M Y+ L N E +++Y TED+G AY+YY
Sbjct: 266 KKFYMPVDYNRDLNLYNKESKLSYFTEDLGWNAYWYY 302
>BT024223-1|ABC86285.1| 789|Drosophila melanogaster LP18812p
protein.
Length = 789
Score = 55.2 bits (127), Expect = 1e-07
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 163 AFVEKQKXLLSLFYNVNXXXYEAEYYKVAQDFNIEAXKDCYTNMKAY-ENFMMMYXV-GF 336
AF+ KQK L + Y V ++ K + F E + YT+ Y + F Y
Sbjct: 31 AFLMKQKFLFEIVYRVEDPLMFEDHIKQGEKFYFE--ESYYTHYDMYMKKFFEAYKAHAL 88
Query: 337 LPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYARVYMN 474
LPK F ++A LF FYYAKD+E F +AR+++N
Sbjct: 89 LPKGEFFGALVMSHAKQARGLFNFFYYAKDWETFAANVAWARMHVN 134
Score = 42.7 bits (96), Expect = 7e-04
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 479 GMFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVN 583
GMF+YA +A+I R+D +LP+ YE +PQ+F N
Sbjct: 136 GMFVYALTMAVIHRNDFHGLMLPSIYEIFPQFFFN 170
Score = 38.3 bits (85), Expect = 0.014
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 677 EQFVMYAXYSNSLTYPNNEXRIAYLTEDVGLXAYYYY 787
++F M Y+ L N E +++Y TED+G AY+YY
Sbjct: 266 KKFYMPVDYTRDLNLYNKESKLSYFTEDLGWNAYWYY 302
>AY069163-1|AAL39308.1| 789|Drosophila melanogaster GH19329p
protein.
Length = 789
Score = 55.2 bits (127), Expect = 1e-07
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 163 AFVEKQKXLLSLFYNVNXXXYEAEYYKVAQDFNIEAXKDCYTNMKAY-ENFMMMYXV-GF 336
AF+ KQK L + Y V ++ K + F E + YT+ Y + F Y
Sbjct: 31 AFLMKQKFLFEIVYRVEDPLMFEDHIKQGEKFYFE--ESYYTHYDMYMKKFFEAYKAHAL 88
Query: 337 LPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYARVYMN 474
LPK F ++A LF FYYAKD+E F +AR+++N
Sbjct: 89 LPKGEFFGALVMSHAKQARGLFNFFYYAKDWETFAANVAWARMHVN 134
Score = 42.7 bits (96), Expect = 7e-04
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 479 GMFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVN 583
GMF+YA +A+I R+D +LP+ YE +PQ+F N
Sbjct: 136 GMFVYALTMAVIHRNDFHGLMLPSIYEIFPQFFFN 170
Score = 38.3 bits (85), Expect = 0.014
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 677 EQFVMYAXYSNSLTYPNNEXRIAYLTEDVGLXAYYYY 787
++F M Y+ L N E +++Y TED+G AY+YY
Sbjct: 266 KKFYMPVDYTRDLNLYNKESKLSYFTEDLGWNAYWYY 302
>AE014134-182|AAF51434.1| 789|Drosophila melanogaster CG4178-PA
protein.
Length = 789
Score = 55.2 bits (127), Expect = 1e-07
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 163 AFVEKQKXLLSLFYNVNXXXYEAEYYKVAQDFNIEAXKDCYTNMKAY-ENFMMMYXV-GF 336
AF+ KQK L + Y V ++ K + F E + YT+ Y + F Y
Sbjct: 31 AFLMKQKFLFEIVYRVEDPLMFEDHIKQGEKFYFE--ESYYTHYDMYMKKFFEAYKAHAL 88
Query: 337 LPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYARVYMN 474
LPK F ++A LF FYYAKD+E F +AR+++N
Sbjct: 89 LPKGEFFGALVMSHAKQARGLFNFFYYAKDWETFAANVAWARMHVN 134
Score = 42.7 bits (96), Expect = 7e-04
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 479 GMFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVN 583
GMF+YA +A+I R+D +LP+ YE +PQ+F N
Sbjct: 136 GMFVYALTMAVIHRNDFHGLMLPSIYEIFPQFFFN 170
Score = 38.3 bits (85), Expect = 0.014
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 677 EQFVMYAXYSNSLTYPNNEXRIAYLTEDVGLXAYYYY 787
++F M Y+ L N E +++Y TED+G AY+YY
Sbjct: 266 KKFYMPVDYTRDLNLYNKESKLSYFTEDLGWNAYWYY 302
>AY118687-1|AAM50547.1| 583|Drosophila melanogaster AT15352p
protein.
Length = 583
Score = 35.1 bits (77), Expect = 0.13
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 482 MFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVNMEV 592
+F+ A +A+ +R DT +PA YE PQ + MEV
Sbjct: 81 LFVNALQMAVEEREDTKDLRMPAMYEVLPQLYFEMEV 117
>AE014296-2359|AAF49758.2| 583|Drosophila melanogaster CG8100-PA
protein.
Length = 583
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 482 MFLYAYYIAIIQRSDTASFVLPAPYEAYPQYFVNMEV 592
+F+ A +A+ +R DT +PA YE PQ + EV
Sbjct: 81 LFVNALQMAVEEREDTKDLRMPAMYEVLPQLYFEKEV 117
>AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA
protein.
Length = 4496
Score = 31.1 bits (67), Expect = 2.2
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +3
Query: 234 VLQSRPGLQHRGXQGLLHKHESLRKFHDDVXGRIPSQEFGILDLLRKNEGRSXRAVQAVL 413
V + +P G + + + +++ D++ ++P +EF +++++ K E R+ + A
Sbjct: 4208 VFEMQPRDAGAGGGATVTREDKVKQIVDEIIEKLP-EEFNMVEIMNKVEERTPYVIVAFQ 4266
Query: 414 LCQRF*MFLQNSMLRQSLHE 473
C+R M S +++SL E
Sbjct: 4267 ECER--MNFLTSEMKRSLKE 4284
>AE014296-3009|AAF49269.1| 575|Drosophila melanogaster CG7320-PA
protein.
Length = 575
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = +1
Query: 337 LPKNLEFSIFYEKMREEAXALFKLFYYAKDFECFYKTACYARVYMN 474
L +N+ ++ Y + L++ FY A+D+ ++ +ARV+++
Sbjct: 14 LHRNVRYNPLYADHYRQMLGLYQFFYNARDWYTLWQNISWARVHVH 59
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,414,456
Number of Sequences: 53049
Number of extensions: 425906
Number of successful extensions: 884
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -