Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C24
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.4  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   3.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   7.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 7/30 (23%), Positives = 13/30 (43%)
 Frame = +3

Query: 528 YYCHPTYEVSVYTIWSGQPWNRMFGXLTLI 617
           Y+    Y++  Y  W  + W+     L L+
Sbjct: 61  YFISNVYQILAYNFWKKKYWSEFLANLKLL 90


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 450 QTRRNPEWRMRTT 412
           QTRRNP +R RT+
Sbjct: 226 QTRRNPYYRPRTS 238


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 419 EQLLLEGGVPGIAD 378
           EQ+L EGG P + D
Sbjct: 837 EQILAEGGCPNLYD 850


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 531 YCHPTYEVSVYTIWSGQPWNRMFGXL 608
           YC   Y + V T +  + W R+   L
Sbjct: 76  YCFNYYVIVVTTFYKRRTWTRLLKNL 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,255
Number of Sequences: 336
Number of extensions: 3286
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)