BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP02_F_C24 (885 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_02_0994 - 13067254-13067379,13067483-13067521,13067824-130678... 32 0.70 03_06_0422 + 33818887-33819996 31 1.2 07_03_0954 - 22864240-22864403,22864821-22864935,22865421-22865462 30 2.1 06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247 30 2.1 07_03_1191 + 24690936-24691029,24691184-24691377 29 5.0 04_04_1030 - 30249160-30250403,30250787-30251666 29 5.0 09_01_0049 + 847576-847854 29 6.6 11_01_0662 - 5389746-5390548,5390727-5391368,5391624-5391659,539... 28 8.7 05_03_0041 - 7662094-7662138,7662269-7662340,7663144-7663179,766... 28 8.7 >03_02_0994 - 13067254-13067379,13067483-13067521,13067824-13067893, 13068025-13068116,13068237-13068319,13068590-13068633, 13068682-13068800,13068883-13068915,13069152-13069239, 13069364-13069413 Length = 247 Score = 31.9 bits (69), Expect = 0.70 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 Query: 115 VCRQTDRPCSQVCHLLQLCTGATTCSSTHPYTDGTCCPYTALC 243 VC T++P +QVC+ +C G CS+ + D C LC Sbjct: 51 VC-DTEQPVAQVCYNCGVCMGEYFCSACKFFDDDVRCRCCLLC 92 >03_06_0422 + 33818887-33819996 Length = 369 Score = 31.1 bits (67), Expect = 1.2 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = -2 Query: 503 ESEEQQERHHKTEQTHSLRQGETQNGV*EQLLLEGGVPGIADDEGAEDXSNTSSGTS 333 E ++ER + E+T SL + N E ++L+G D+ +D SNTSSG S Sbjct: 156 ERMRERERERRRERTESLILINSNN---EAIILQGT---FGPDDNQDDSSNTSSGVS 206 >07_03_0954 - 22864240-22864403,22864821-22864935,22865421-22865462 Length = 106 Score = 30.3 bits (65), Expect = 2.1 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 115 VCRQTDRPCSQVCHLLQLCTGATTCSSTHPYTDG 216 +CRQ + C CH++ LC G + S P T G Sbjct: 38 ICRQVEAGCFAHCHIV-LCKGEPSRSPFRPVTSG 70 >06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247 Length = 974 Score = 30.3 bits (65), Expect = 2.1 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 2/90 (2%) Frame = -2 Query: 551 LICRMAVVGFLKVNSLESEEQQERHHKTEQTHSLRQGETQNGV*EQLLLEGGVPGIADDE 372 L C + + + + ++ +T + Q T NG E L GG ++ + Sbjct: 331 LACIIVLKAIISCQTYSNDRSNNVEEQTSTGNCRAQINTSNGGAESLSSNGGAESVSSNG 390 Query: 371 GAEDXSNTSSG--TSYSHXRXTSTNEXGSR 288 GAE S+ + T+ + T T+ G++ Sbjct: 391 GAESVSSNARAQPTTTNGGEETKTSNAGAQ 420 >07_03_1191 + 24690936-24691029,24691184-24691377 Length = 95 Score = 29.1 bits (62), Expect = 5.0 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +1 Query: 115 VCRQTDRPCSQV-CHLLQLCTGATTCSSTHPYTDGTCC 225 VC++T+ C+Q CH + L G T S + D CC Sbjct: 38 VCQKTEYGCTQEKCHQMCLGDGRTVASQYCRHYDTQCC 75 >04_04_1030 - 30249160-30250403,30250787-30251666 Length = 707 Score = 29.1 bits (62), Expect = 5.0 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = -3 Query: 277 LVTDVVLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFI 98 +V D ++G +C+E R + Y CK + C EDG G R + SGG +I Sbjct: 238 MVLDWYIQGGNCKEASRSRQ------TYMCKENSYCYEVEDG-AGYRCNCSGGYTGNPYI 290 Query: 97 RC 92 C Sbjct: 291 GC 292 >09_01_0049 + 847576-847854 Length = 92 Score = 28.7 bits (61), Expect = 6.6 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = +1 Query: 190 SSTHPYTDGTCCPYTALCSAVLPXPHRSLRTLTLLPNSLVLVXRXW 327 +ST+ +D T C AV P P ++R +P + L+ R W Sbjct: 46 ASTYAASDSASSAPTDACMAVFPPPAPAIRARHSIPVAYRLLPRAW 91 >11_01_0662 - 5389746-5390548,5390727-5391368,5391624-5391659, 5392314-5392377 Length = 514 Score = 28.3 bits (60), Expect = 8.7 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -2 Query: 512 NSLESEEQQERHHKTEQTHSLRQ 444 NS+ E QE+ H E+TH LRQ Sbjct: 62 NSIFYSESQEQKHVKEETHRLRQ 84 >05_03_0041 - 7662094-7662138,7662269-7662340,7663144-7663179, 7663356-7663449,7663533-7663681,7664525-7664864, 7666417-7666748,7667348-7667821 Length = 513 Score = 28.3 bits (60), Expect = 8.7 Identities = 24/73 (32%), Positives = 33/73 (45%) Frame = -2 Query: 257 GRTALQRAV*GQQVPSVYGWVLLQVVAPVQSCRRWQTWLQGRSVWRQTAFCFYKVRRATT 78 G T QRA S++ V+LQ V +Q +W + V++ +FC Y RA Sbjct: 87 GLTPAQRAESWDNYCSLFS-VVLQGVVNMQLPNQWLWDMVDEFVYQFQSFCQY---RAKL 142 Query: 77 KNTEKEETGLWNQ 39 KN EE L Q Sbjct: 143 KNKTHEEIALLKQ 155 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,209,579 Number of Sequences: 37544 Number of extensions: 359245 Number of successful extensions: 1041 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1013 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1040 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2503236492 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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