Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C23
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008           31   1.6  
05_01_0142 - 940421-940701,941262-941574                               28   8.8  

>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
          Length = 580

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
 Frame = +2

Query: 176 DSGXGYEPIDXRPYXVNPPKDYXPNGNGYXPI---DNGAXYVXRPXGRPYFKPTPFPGAR 346
           +    Y P    P  V PP  Y P  +G  P     N + Y   P GRP   P P  GA 
Sbjct: 389 EEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYGAG 447

Query: 347 G 349
           G
Sbjct: 448 G 448


>05_01_0142 - 940421-940701,941262-941574
          Length = 197

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +1

Query: 793 PXGYPXXXGXXPQXXXTXXPPPGPXP 870
           P GYP   G  P       PPPG  P
Sbjct: 37  PQGYPPPPGAYPPPPGAYPPPPGAYP 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,357,682
Number of Sequences: 37544
Number of extensions: 189641
Number of successful extensions: 249
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)