Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C22
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0191 - 1289442-1289875,1290073-1290154,1291046-1291090,129...    30   2.9  

>02_01_0191 -
           1289442-1289875,1290073-1290154,1291046-1291090,
           1291274-1291357,1291428-1291631,1291735-1291894,
           1292042-1292292
          Length = 419

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
 Frame = +1

Query: 523 RKSPGSLPPCWKTTEFTXKIMSTEDKQYLKLDNTKGSS--DDRIIYGDS-----TADTFK 681
           R+ P + PP ++++         E + +   D  + S+  DD +IY  +     T  T K
Sbjct: 133 RRDPQTGPPQYQSSTIFENANPEEVRDFFGDDQFRMSNKWDDMLIYHKTLEECQTTGTMK 192

Query: 682 XHWYLEPSMYESXVXFFVYXREY 750
            HW  +    +    FF   REY
Sbjct: 193 VHWVRKVDYLDMIFPFFCSDREY 215


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,519,458
Number of Sequences: 37544
Number of extensions: 305305
Number of successful extensions: 593
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)