Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C22
         (898 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47586| Best HMM Match : NAD_binding_3 (HMM E-Value=2)               35   0.10 
SB_36210| Best HMM Match : Peptidase_M43 (HMM E-Value=0)               29   3.9  

>SB_47586| Best HMM Match : NAD_binding_3 (HMM E-Value=2)
          Length = 295

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 26/92 (28%), Positives = 39/92 (42%)
 Frame = +1

Query: 487 KLXSVTPKTKPARKSPGSLPPCWKTTEFTXKIMSTEDKQYLKLDNTKGSSDDRIIYGDST 666
           +L  V P T P  + P    P W  + F   +M+  D   LK + T  SS   ++  DST
Sbjct: 112 RLLPVAPPTVPLPEMPAVPRPAWFLSIFLRDVMTRMD--VLKAEIT--SSFGAVLKMDST 167

Query: 667 ADTFKXHWYLEPSMYESXVXFFVYXREYNSVM 762
               K   +L  S +      F++ R Y+  M
Sbjct: 168 KKVLKKQQHLHFSSFYQFSYMFLFIRRYSCDM 199


>SB_36210| Best HMM Match : Peptidase_M43 (HMM E-Value=0)
          Length = 882

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 505 PKT-KPARKSPGSLPPCWKTTEFTXKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADT 675
           PK   P +K+P S P C+    F   I+ TE   ++      G SD  +I+ D T ++
Sbjct: 746 PKAWNPMQKAPRSCPNCYIELGFKEAIIPTELSIWVTWHPKNGISDIWLIFFDGTHES 803


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,058,199
Number of Sequences: 59808
Number of extensions: 355488
Number of successful extensions: 693
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2574115416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)