Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C21
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0674 - 21745321-21746223,21746229-21747608                       29   5.0  

>12_02_0674 - 21745321-21746223,21746229-21747608
          Length = 760

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
 Frame = +3

Query: 339 TTXLSLPLRGLRYPATVTCLSIARSTATPRALSMPTT---TLALSIITGXSTTCXDACDV 509
           T  LS P   +  P+T +   +  STAT +  S P T   + A S I     T   +   
Sbjct: 498 TGELSTPTSQI--PSTASTREL--STATGKIPSTPRTNPLSTATSKIPSTPRTSLLSSST 553

Query: 510 ELXPSTPXRXGXXXSTGWLPSXGCT 584
              PSTP       +TG +PS  CT
Sbjct: 554 SKIPSTPSTCELSTATGKIPSTTCT 578


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,234,045
Number of Sequences: 37544
Number of extensions: 241712
Number of successful extensions: 503
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)