Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_C21
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 32 0.64
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 32 0.64
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 2.0
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 4.5
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 32.7 bits (71), Expect = 0.37
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 297 FPNSCRPTLTPSRFTTXLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITG 476
F S PT T S T + R P T T ++TAT PTTT++ + T
Sbjct: 142 FVCSYDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTT 201
Query: 477 -XSTTCXDAC 503
TT AC
Sbjct: 202 VPPTTTPKAC 211
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 32.7 bits (71), Expect = 0.37
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 300 PNSCRPTLTPSRFTTXLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTT 452
P+ C+PT +P + +++ ++ P T +C+ + TP+ + TTT
Sbjct: 268 PSQCQPTCSPQCIQS-VTVSIQTTAQPTTASCIPACQPACTPQCVQAVTTT 317
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +3
Query: 306 SCRPTLTPSRFTTXLSLPLRGLRY--PATVTCLSIARSTATPRALSMPTTTLA-LSIITG 476
+C+P P LS G+ P T C+SI + P +++ TTT A L ++
Sbjct: 359 ACQPACQPQCVYQYLSSGSSGISTVPPVTKVCISICQPACDPGCVAIYTTTPAPLHCVSQ 418
Query: 477 XSTTCXDAC 503
C +C
Sbjct: 419 CQPACLPSC 427
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 330 SRFTTXLSL-PLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSI 467
S F LS P R R P + + +SI+ +T+TPR+ P+TT + +
Sbjct: 564 SSFPARLSTAPSRRSRIPLSTSRISISSTTSTPRSARSPSTTSRIRV 610
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 330 SRFTTXLSL-PLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSI 467
S F LS P R R P + + +SI+ +T+TPR+ P+TT + +
Sbjct: 564 SSFPARLSTAPSRRSRIPLSTSRISISSTTSTPRSARSPSTTSRIRV 610
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +3
Query: 315 PTLTPSRFTTXLSLPLRGLRYPATVTCLSIA--RSTATPRALSMPTTTLALSIITGXSTT 488
PT T + TT ++P P T T + +T TP + P TT + + T +TT
Sbjct: 203 PTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTT 262
Query: 489 CXDACDVELXPSTP 530
+TP
Sbjct: 263 TQTTTKPTTTTTTP 276
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +3
Query: 315 PTLTPSRFTTXLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGXSTT 488
PT T + TT + P P T T +T ++PTTT T +TT
Sbjct: 175 PTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTT 232
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = +3
Query: 318 TLTPSRFTTXLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGXSTTCXD 497
T T + FTT + L P+T T + ST++ + PTTTL S STT
Sbjct: 388 TTTSTTFTTTM-LTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTS-TASTSTTEPS 445
Query: 498 ACDVELXPST 527
V PST
Sbjct: 446 TSTVTTSPST 455
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = +3
Query: 318 TLTPSRFTTXLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGXSTTCXD 497
T T + FTT + L P+T T + ST++ + PTTTL S STT
Sbjct: 388 TTTSTTFTTTM-LTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTS-TASTSTTEPS 445
Query: 498 ACDVELXPST 527
V PST
Sbjct: 446 TSTVTTSPST 455
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 315 PTLTPSRFTTXLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGXSTT 488
PT T S T+ ++ P ++ T + +T TP ++ TTT +T +TT
Sbjct: 244 PTTTVSYSTSTITTPQEDDSEYSSTTSADVISTTTTPSIDAIETTTTGFDAVTTTTTT 301
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 300 PNSCRP-TLTPSRFTTXLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITG 476
PN +P T + ++ TT S R AT T L+ TP ++PTT+LAL T
Sbjct: 321 PNVTKPITRSTTKRTTTRSTTKRLTTTKAT-TVLTTTPVKVTPATTTLPTTSLALETTTT 379
Query: 477 XSTT 488
+ T
Sbjct: 380 ATRT 383
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 315 PTLTPSRFTTXLSLPLRGLRY-PATVTCLSIARSTATPRALSMPTTTLALSIITGXSTT 488
PT T + TT + P P T T + +T TP + TTT + T TT
Sbjct: 65 PTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTT 123
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 28.3 bits (60), Expect = 7.9
Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 3/117 (2%)
Frame = +3
Query: 255 SEPRXGTGXXAAAFFPNSCRPT-LTPSRFTTXLSLPLRGLRYPATVTCLSIARST-ATPR 428
S P T + P + + T TP+ TT S P P T T + +T TP
Sbjct: 160 STPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTT----PTTPTTMKSTPTTPTTPT 215
Query: 429 AL-SMPTTTLALSIITGXSTTCXDACDVELXPSTPXRXGXXXSTGWLPSXGCTHLAT 596
+ S PTT + + TT ++ P+TP ST P+ T +T
Sbjct: 216 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKST 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,840,804
Number of Sequences: 27780
Number of extensions: 179363
Number of successful extensions: 451
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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