Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C17
         (893 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...   151   1e-38
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.71 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   2.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   8.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   8.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   8.7  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   8.7  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score =  151 bits (365), Expect = 1e-38
 Identities = 82/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
 Frame = +3

Query: 258 GSLARYLGIFSSHGVNLSHIESRSSTRRPGYEF--MVECEHGSGDFGAALEELKKNVGYL 431
           GSLAR L    +    ++H+ESR S ++ G +F  +V+ +         +  L+++    
Sbjct: 99  GSLARILKTIENFKGTVTHVESRPS-KKEGLQFDVLVKVDMTRQYLLQLIRNLRQSSALD 157

Query: 432 NIISRNYKDNRSAV--PWFPRRIRDLDRFANQILSYGAELDSDHPGFTDPVYRDRRKYFA 605
            +      DN  ++  PWFPR   DLD   + +  +  +LD +HPGF D  YR RRK+ A
Sbjct: 158 GVTL--LADNSVSIKDPWFPRHASDLDNCNHLMTKFEPDLDMNHPGFADKEYRARRKFIA 215

Query: 606 DIAYNYKHGEPLPYVEYTKEEVATWGVVFRKLTELYPTHACKEHNHVFPLLIENCGYRDD 785
           +IA+ Y++G+ +P V YT+ E  TW  VF  L +L P HAC E+   F  + E   +   
Sbjct: 216 EIAFAYRYGDAIPTVPYTETETETWTRVFNTLVDLVPKHACAEYRRNFKKMQEEKIFEPH 275

Query: 786 HIPQLEDVSNFLRDSTGFTLRXGAGXLSSRXFLAGL 893
            IPQL++VS FL+ +TGFTLR  AG L+SR FL+ L
Sbjct: 276 RIPQLQEVSEFLKKNTGFTLRPAAGLLTSRDFLSSL 311


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 93  TEKEMDITAKQIEQPTSGSPPDKP 164
           T+++  I  +Q +QP+SG+P  +P
Sbjct: 2   TQQKQPIITQQSQQPSSGAPGPQP 25


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -2

Query: 259 PASSGAAGEIRSQVDLVESRPSRM*LPPSINFGLSGGEPDV 137
           P SS    E ++++DL+E  P R     S    LSG E DV
Sbjct: 400 PESSSNLQE-KTKIDLLEIPPIRKISDCSTTSSLSGDESDV 439


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = -2

Query: 184 LPPSINFGLSGGEPDVGCSICFAVMSISFSVAGRGVCS 71
           +PP++   L+GG  ++G  +C + +S+   +    + S
Sbjct: 91  MPPAVLLQLTGGTWELGPMLCDSWVSLDILLCTASILS 128



 Score = 22.2 bits (45), Expect = 6.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 445 ETIKIIDPLFLGSHVVSAT*IASPTRSSHTVPNWTLITL 561
           +T      ++  +H VS+      TR+ + +PNWT + L
Sbjct: 4   QTANYYGDVYQWNHTVSSG--ERDTRTEYYLPNWTDLVL 40


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 414 KNVGYLNIISRNYKDNRSAVPWFPRRIRDLDR 509
           KN  YL++I RN       + W      DL++
Sbjct: 367 KNAKYLDVIERNSGATDKIIRWCTWSEGDLEK 398


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 414 KNVGYLNIISRNYKDNRSAVPWFPRRIRDLDR 509
           KN  YL++I RN       + W      DL++
Sbjct: 367 KNAKYLDVIERNSGATDKIIRWCTWSEGDLEK 398


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 414 KNVGYLNIISRNYKDNRSAVPWFPRRIRDLDR 509
           KN  YL++I RN       + W      DL++
Sbjct: 367 KNAKYLDVIERNSGATDKIIRWCTWSEGDLEK 398


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 624 KHGEPLPYVEYTKEEVATWGVVFRKL 701
           K   P P  +     +  W ++FRKL
Sbjct: 227 KQNRPTPAADIYSLGIVAWQMLFRKL 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,602
Number of Sequences: 438
Number of extensions: 7096
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)