SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C16
         (912 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.        33   1.1  
BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger ...    33   1.1  
BC112305-1|AAI12306.1|  300|Homo sapiens hydroxysteroid (17-beta...    33   1.9  
BC112303-1|AAI12304.1|  300|Homo sapiens hydroxysteroid (17-beta...    33   1.9  
AY358575-1|AAQ88938.1|  300|Homo sapiens NIIL497 protein.              33   1.9  
AY268355-1|AAP42289.1|  300|Homo sapiens short-chain dehydrogena...    33   1.9  
AY186250-1|AAO72314.1|  264|Homo sapiens 17-beta hydroxysteroid ...    33   1.9  
AY186249-1|AAO72313.1|  300|Homo sapiens 17-beta hydroxysteroid ...    33   1.9  
AB073347-1|BAD38632.1|  300|Homo sapiens putative protein produc...    33   1.9  
U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.                    31   7.7  
U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome ...    31   7.7  
BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrom...    31   7.7  
BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.          31   7.7  
AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrom...    31   7.7  

>Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.
          Length = 639

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 854 PPPPPGXXXFXFXXPPPPP 910
           PPPPPG     +  PPPPP
Sbjct: 586 PPPPPGSAGMMYAPPPPPP 604


>BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger
           protein 162 protein.
          Length = 265

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 854 PPPPPGXXXFXFXXPPPPP 910
           PPPPPG     +  PPPPP
Sbjct: 212 PPPPPGSAGMMYAPPPPPP 230


>BC112305-1|AAI12306.1|  300|Homo sapiens hydroxysteroid (17-beta)
           dehydrogenase 13 protein.
          Length = 300

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -1

Query: 258 HSSVRTHIPPCLMQSSSLNGVCVSKGLLHTVTAISKTMTKTHCISFIFNFLGVGTAPCVR 79
           H  +   IP C   SS    V   +GL   + A+ KT  KT C+  +F   G    P  R
Sbjct: 176 HEGIPYLIPYC---SSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR 232

Query: 78  L*WLTKYTPKILR 40
           L W    T +++R
Sbjct: 233 L-WPVLETDEVVR 244


>BC112303-1|AAI12304.1|  300|Homo sapiens hydroxysteroid (17-beta)
           dehydrogenase 13 protein.
          Length = 300

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -1

Query: 258 HSSVRTHIPPCLMQSSSLNGVCVSKGLLHTVTAISKTMTKTHCISFIFNFLGVGTAPCVR 79
           H  +   IP C   SS    V   +GL   + A+ KT  KT C+  +F   G    P  R
Sbjct: 176 HEGIPYLIPYC---SSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR 232

Query: 78  L*WLTKYTPKILR 40
           L W    T +++R
Sbjct: 233 L-WPVLETDEVVR 244


>AY358575-1|AAQ88938.1|  300|Homo sapiens NIIL497 protein.
          Length = 300

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -1

Query: 258 HSSVRTHIPPCLMQSSSLNGVCVSKGLLHTVTAISKTMTKTHCISFIFNFLGVGTAPCVR 79
           H  +   IP C   SS    V   +GL   + A+ KT  KT C+  +F   G    P  R
Sbjct: 176 HEGIPYLIPYC---SSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR 232

Query: 78  L*WLTKYTPKILR 40
           L W    T +++R
Sbjct: 233 L-WPVLETDEVVR 244


>AY268355-1|AAP42289.1|  300|Homo sapiens short-chain
           dehydrogenase/reductase 9 protein.
          Length = 300

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -1

Query: 258 HSSVRTHIPPCLMQSSSLNGVCVSKGLLHTVTAISKTMTKTHCISFIFNFLGVGTAPCVR 79
           H  +   IP C   SS    V   +GL   + A+ KT  KT C+  +F   G    P  R
Sbjct: 176 HEGIPYLIPYC---SSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR 232

Query: 78  L*WLTKYTPKILR 40
           L W    T +++R
Sbjct: 233 L-WPVLETDEVVR 244


>AY186250-1|AAO72314.1|  264|Homo sapiens 17-beta hydroxysteroid
           dehydrogenase isoform 1 protein.
          Length = 264

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -1

Query: 258 HSSVRTHIPPCLMQSSSLNGVCVSKGLLHTVTAISKTMTKTHCISFIFNFLGVGTAPCVR 79
           H  +   IP C   SS    V   +GL   + A+ KT  KT C+  +F   G    P  R
Sbjct: 140 HEGIPYLIPYC---SSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR 196

Query: 78  L*WLTKYTPKILR 40
           L W    T +++R
Sbjct: 197 L-WPVLETDEVVR 208


>AY186249-1|AAO72313.1|  300|Homo sapiens 17-beta hydroxysteroid
           dehydrogenase protein.
          Length = 300

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -1

Query: 258 HSSVRTHIPPCLMQSSSLNGVCVSKGLLHTVTAISKTMTKTHCISFIFNFLGVGTAPCVR 79
           H  +   IP C   SS    V   +GL   + A+ KT  KT C+  +F   G    P  R
Sbjct: 176 HEGIPYLIPYC---SSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR 232

Query: 78  L*WLTKYTPKILR 40
           L W    T +++R
Sbjct: 233 L-WPVLETDEVVR 244


>AB073347-1|BAD38632.1|  300|Homo sapiens putative protein product
           of HMFN0376 protein.
          Length = 300

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -1

Query: 258 HSSVRTHIPPCLMQSSSLNGVCVSKGLLHTVTAISKTMTKTHCISFIFNFLGVGTAPCVR 79
           H  +   IP C   SS    V   +GL   + A+ KT  KT C+  +F   G    P  R
Sbjct: 176 HEGIPYLIPYC---SSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR 232

Query: 78  L*WLTKYTPKILR 40
           L W    T +++R
Sbjct: 233 L-WPVLETDEVVR 244


>U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 854 PPPPPGXXXFXFXXPPPPP 910
           PPPPPG        PPPPP
Sbjct: 382 PPPPPGAGGPPMPPPPPPP 400


>U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           protein protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 854 PPPPPGXXXFXFXXPPPPP 910
           PPPPPG        PPPPP
Sbjct: 382 PPPPPGAGGPPMPPPPPPP 400


>BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           (eczema-thrombocytopenia) protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 854 PPPPPGXXXFXFXXPPPPP 910
           PPPPPG        PPPPP
Sbjct: 382 PPPPPGAGGPPMPPPPPPP 400


>BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.
          Length = 514

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 854 PPPPPGXXXFXFXXPPPPP 910
           PPPPPG        PPPPP
Sbjct: 394 PPPPPGAGGPPMPPPPPPP 412


>AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrome
           protein protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 854 PPPPPGXXXFXFXXPPPPP 910
           PPPPPG        PPPPP
Sbjct: 382 PPPPPGAGGPPMPPPPPPP 400


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,836,595
Number of Sequences: 237096
Number of extensions: 2147452
Number of successful extensions: 10549
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8434
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -