Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_C16
(912 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 30 2.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPPG PPPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPP 731
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPP F PPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 805 PXPGGGXXXXXXXXXXPPPXPXXXXXXXXGPPXPPP 912
P P G PPP P GPP PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPPG PPPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPP 731
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPP F PPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 805 PXPGGGXXXXXXXXXXPPPXPXXXXXXXXGPPXPPP 912
P P G PPP P GPP PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPPG PPPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPP 314
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPP F PPPPP
Sbjct: 354 PPPPPPPGGFKGGPPPPPP 372
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 805 PXPGGGXXXXXXXXXXPPPXPXXXXXXXXGPPXPPP 912
P P G PPP P GPP PPP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPPG PPPPP
Sbjct: 2278 PPPPPGYMHTPPLPPPPPP 2296
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPPG PPPPP
Sbjct: 335 PPPPPGMRYPGGMPPPPPP 353
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPP + PPPPP
Sbjct: 334 PPPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPPG PPPPP
Sbjct: 345 PPPPPGMRYPGGMPPPPPP 363
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPP + PPPPP
Sbjct: 344 PPPPPPGMRYPGGMPPPPP 362
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPP + PPPPP
Sbjct: 40 PPPPPPPCGGGYEAPPPPP 58
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPP + PPPPP
Sbjct: 42 PPPPPCGGGYEAPPPPPPP 60
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPP PPPPP
Sbjct: 1344 PPPPPSDDLTPVPPPPPPP 1362
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPP PPPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPP 812
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 854 PPPPPGXXXFXFXXPPPPP 910
PPPPP PPPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPP 812
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,260,852
Number of Sequences: 27780
Number of extensions: 323336
Number of successful extensions: 1822
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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